Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G13360.3
CDS Infomation	\| Auxin-responsive GH3 family protein \| Chr5:4283488-4286120 FORWARD LENGTH=2019 \| 201606
Sequence	ATGTTTTTATCTCCTCGTAGTGCTCACCAAAAGGTTGGACTCTCTATGCTAATTGACCCT CTTCCTGAAAAAAATACCAAATCTGGCAACTCATCCACAATTTTACGCCACCGAACATTT CGCCAAACCACACATTTTGTCTGCTTTCTACTTCGCCAGGGAAAGTGGCCAGAGCTCATC TACTTCGCAAGAACTAAGCAATCTCTTGTAAGTCAAAAGGCAGCACAAGCAATCATGTTG CCAAAGTTCGATCCAACAGACCAAAAAGCTTGTCTGTCTCTTCTTGAGGATGTGACTACC AACGTAAAGCAGATTCAAGATTCTGTCTTGGAAGCAATACTTTCACGTAATGCTCATACC GAGTATCTTAGTGGTTTCCTCAACGGTCAAGCTGATAAGAAAAGCTTCAAGAAGAATGTA CCCGTTGTAACCTACGAAGATATTAAGCCTTATATCGATCGTATCGCCAATGGAGAGCCG TCTGATCTCATCTGTGATCGACCCATCAGTGTACTCTTGACTAGCTCAGGTACTTCAGGA GGAGTTCCGAAGCTGATTCCTTTGACAACAGAGGAGTTGGAACAGAGGATTTCGTTTGCT TCTCTCTATAGACCTCTACTCTACAAGTACATCGAGGGTATTAGAGAAAGAAAATCTTTC ATGTTATATTTCGTGACTCGAGAAAGCGAGACTGCTTCTGGGATACTGGTCAGGACTATG ATAACTTGTGTTTTGAAAAGCGTGACGCCAGCTAACTCTTTTATCTGGGATCAATCACAG ATAAGCCCGCATGCGATTACGACTTGTTCAGACACTACTCAGAGCATGTACTGCCAACTG CTTTGTGGGCTTCTACAACGAGATAATGTAGGTCGCCTTGGTGCACCATTTGCTTCATCC TTTCTCAAAATAATCAAGTTCTTGGAGGATCACTGGCCTGAGTTTTGCTCAAACATAAGG ACTGGTTGTCTCAGTGACTGGATTACAGACCCCCAATGTGTTTCAGGGATCGGTAAGTTC CTCACTGCTCCTAATCCGGAACTAGCGAGCCTTATCGAGCAAGAATGCAGTCAAACATCA TGGGAAGCAATAGTGAAGAGACTATGGCCAAAAGCAAAATGCATCGAAGCCATTGTTACA GGAACCATGGCACAGTACAATCCATTACTGGAATTCTATAGCGGTGGTCTTCCTGTGATT TCAACGTTTTATGGCAGCTCTGAATGTTTCTTCGGTCTCAATCTCAATCCTCTGTCTAAG CCTAATGAGGTGTCGTACACCATCATTCCATGTATGGCTTATTTCGAGTTCTTAGAGGTT GAGAAAGACTATGAAAGTGGTCATGATCCCGCAGAGAATCCTGTTGTAGTCGATCTTGTC GATGTTAAAATCGGTCATGATTATGAACCTGTTGTCACAACGTTTGCTGGTTTGTATAGG TACCGTTTAGGGGACGTTTTAAGAGTGACTGGTTTCTACAACAATGCGCCACAGTTTCAT TTCGTGGGAAGACAGAAAGTTGTTCTGAGCATCGACATGGACAAGACCTACGACGAAGAC CTCCTCAAGGCAGTGACTAACGCGAGTCTCCTGCTTGAGCCACATGACCTAATGCTCATG GATTTCACTAGCCGTGTGGATTCCTCCTCGTATCCAGGTCACTACGTGCTCTACTGGGAA CTCGGGAGAAAAGTCAAGGACGCCAAGCTTGAGCTTGACCAGAATGTTTTGGAGGAATGC TGCTTCACCATTGAGGAGTCTCTGGACGCGGTTTACAGAAAAGGACGAAAGAATGATAAG AACATTGGACCACTTGAGATTAAGGTTGTTAAGCCTGGCGCTTTCGACAAGCTCATGAAC TTCTTTCTGTCTAGAGGCTCTTCTGTGAGTCAGTATAAGACACCGAGGTCGGTGACGAAT GAAGAAGCCTTGAAGATATTGGAGGCCAACGTTGTGTCCGAGTTTCTTAGCCAGAAAACT CCGTCGTGGGAGCTACATGAGCTGCATTCCAGCCGATAA

Peptide Sequence

PEP ID	AT5G13360.3
PEP Infomation	\| Auxin-responsive GH3 family protein \| Chr5:4283488-4286120 FORWARD LENGTH=672 \| 201606
Sequence	MFLSPRSAHQKVGLSMLIDPLPEKNTKSGNSSTILRHRTFRQTTHFVCFLLRQGKWPELI YFARTKQSLVSQKAAQAIMLPKFDPTDQKACLSLLEDVTTNVKQIQDSVLEAILSRNAHT EYLSGFLNGQADKKSFKKNVPVVTYEDIKPYIDRIANGEPSDLICDRPISVLLTSSGTSG GVPKLIPLTTEELEQRISFASLYRPLLYKYIEGIRERKSFMLYFVTRESETASGILVRTM ITCVLKSVTPANSFIWDQSQISPHAITTCSDTTQSMYCQLLCGLLQRDNVGRLGAPFASS FLKIIKFLEDHWPEFCSNIRTGCLSDWITDPQCVSGIGKFLTAPNPELASLIEQECSQTS WEAIVKRLWPKAKCIEAIVTGTMAQYNPLLEFYSGGLPVISTFYGSSECFFGLNLNPLSK PNEVSYTIIPCMAYFEFLEVEKDYESGHDPAENPVVVDLVDVKIGHDYEPVVTTFAGLYR YRLGDVLRVTGFYNNAPQFHFVGRQKVVLSIDMDKTYDEDLLKAVTNASLLLEPHDLMLM DFTSRVDSSSYPGHYVLYWELGRKVKDAKLELDQNVLEECCFTIEESLDAVYRKGRKNDK NIGPLEIKVVKPGAFDKLMNFFLSRGSSVSQYKTPRSVTNEEALKILEANVVSEFLSQKT PSWELHELHSSR

Transcript Sequence

Transcript ID	AT5G13360.3
Transcript Infomation	\| Auxin-responsive GH3 family protein \| Chr5:4283356-4286342 FORWARD LENGTH=2373 \| 201606
Sequence	CAAGATTGATGACCGTAGTAGTAACCACATGGTTTTTGTCTGCATTCATTGTTTCTAAAG ATTGGGGGAAAAGACAAAACTACTTAATCTTACTTTCAAATCTTCAACGTGTCACTGATT TCTCCATTTAAAATGTTTTTATCTCCTCGTAGTGCTCACCAAAAGGTTGGACTCTCTATG CTAATTGACCCTCTTCCTGAAAAAAATACCAAATCTGGCAACTCATCCACAATTTTACGC CACCGAACATTTCGCCAAACCACACATTTTGTCTGCTTTCTACTTCGCCAGGGAAAGTGG CCAGAGCTCATCTACTTCGCAAGAACTAAGCAATCTCTTGTAAGTCAAAAGGCAGCACAA GCAATCATGTTGCCAAAGTTCGATCCAACAGACCAAAAAGCTTGTCTGTCTCTTCTTGAG GATGTGACTACCAACGTAAAGCAGATTCAAGATTCTGTCTTGGAAGCAATACTTTCACGT AATGCTCATACCGAGTATCTTAGTGGTTTCCTCAACGGTCAAGCTGATAAGAAAAGCTTC AAGAAGAATGTACCCGTTGTAACCTACGAAGATATTAAGCCTTATATCGATCGTATCGCC AATGGAGAGCCGTCTGATCTCATCTGTGATCGACCCATCAGTGTACTCTTGACTAGCTCA GGTACTTCAGGAGGAGTTCCGAAGCTGATTCCTTTGACAACAGAGGAGTTGGAACAGAGG ATTTCGTTTGCTTCTCTCTATAGACCTCTACTCTACAAGTACATCGAGGGTATTAGAGAA AGAAAATCTTTCATGTTATATTTCGTGACTCGAGAAAGCGAGACTGCTTCTGGGATACTG GTCAGGACTATGATAACTTGTGTTTTGAAAAGCGTGACGCCAGCTAACTCTTTTATCTGG GATCAATCACAGATAAGCCCGCATGCGATTACGACTTGTTCAGACACTACTCAGAGCATG TACTGCCAACTGCTTTGTGGGCTTCTACAACGAGATAATGTAGGTCGCCTTGGTGCACCA TTTGCTTCATCCTTTCTCAAAATAATCAAGTTCTTGGAGGATCACTGGCCTGAGTTTTGC TCAAACATAAGGACTGGTTGTCTCAGTGACTGGATTACAGACCCCCAATGTGTTTCAGGG ATCGGTAAGTTCCTCACTGCTCCTAATCCGGAACTAGCGAGCCTTATCGAGCAAGAATGC AGTCAAACATCATGGGAAGCAATAGTGAAGAGACTATGGCCAAAAGCAAAATGCATCGAA GCCATTGTTACAGGAACCATGGCACAGTACAATCCATTACTGGAATTCTATAGCGGTGGT CTTCCTGTGATTTCAACGTTTTATGGCAGCTCTGAATGTTTCTTCGGTCTCAATCTCAAT CCTCTGTCTAAGCCTAATGAGGTGTCGTACACCATCATTCCATGTATGGCTTATTTCGAG TTCTTAGAGGTTGAGAAAGACTATGAAAGTGGTCATGATCCCGCAGAGAATCCTGTTGTA GTCGATCTTGTCGATGTTAAAATCGGTCATGATTATGAACCTGTTGTCACAACGTTTGCT GGTTTGTATAGGTACCGTTTAGGGGACGTTTTAAGAGTGACTGGTTTCTACAACAATGCG CCACAGTTTCATTTCGTGGGAAGACAGAAAGTTGTTCTGAGCATCGACATGGACAAGACC TACGACGAAGACCTCCTCAAGGCAGTGACTAACGCGAGTCTCCTGCTTGAGCCACATGAC CTAATGCTCATGGATTTCACTAGCCGTGTGGATTCCTCCTCGTATCCAGGTCACTACGTG CTCTACTGGGAACTCGGGAGAAAAGTCAAGGACGCCAAGCTTGAGCTTGACCAGAATGTT TTGGAGGAATGCTGCTTCACCATTGAGGAGTCTCTGGACGCGGTTTACAGAAAAGGACGA AAGAATGATAAGAACATTGGACCACTTGAGATTAAGGTTGTTAAGCCTGGCGCTTTCGAC AAGCTCATGAACTTCTTTCTGTCTAGAGGCTCTTCTGTGAGTCAGTATAAGACACCGAGG TCGGTGACGAATGAAGAAGCCTTGAAGATATTGGAGGCCAACGTTGTGTCCGAGTTTCTT AGCCAGAAAACTCCGTCGTGGGAGCTACATGAGCTGCATTCCAGCCGATAAAACCGCCCT CACAATTTTTTTTTCTAGTTGAGAGTAGGATACTTAAGAAGGGTGAAACAATGTAGAACC TAAAATAAAACTTAGCAATGATGAGAAAATTTTACTCTCACTTGTCCTACCATTCAAAGC TATATACCATTGATGGGATATCAAATAAGAGTATACCATTGTAACCATCCAAAAATCTTT AACTCCTCTACTACGCAAGATTTTTGACCGACC