Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G11540.1
CDS Infomation	\| D-arabinono-1%2C4-lactone oxidase family protein \| Chr5:3703002-3704981 REVERSE LENGTH=1758 \| 201606
Sequence	ATGCGTTACTCTCATACTCTCCAGCAGTTCTCAATTCTATCTTTCTTCGTTACAATATGG ACCGTTCAATCAGTACCACCACAACCACCGATTCGATGCGACCAAACCGGCTGCACCGTC TCCAACGCGTACGGCACGTGGCCTGACCGCAAAACCTGTCACGCGGCTAACGTCACATAC CCAACGACGGAGGAAGACCTTCGTAAAGCCGTTGCTTACGCGGCTGAGCACAATCTCAAA GTCAAAACCGTCACCAAATTCTCTCACACCATACCGAAACTCGCTTGTCCTTCAGGTTCA GACGCATTGCTAATTAGTACGTCGAAATATAATTCGGTTATCGAGATTGAACCGGAACTG TTAACGGTCACGGCTGATTCTGGAGTTTCGTTGAGAGAGCTGATCGAGAAAGTTGAAGGA GCTGGGTTTAGCATCGGAACGTCACCGTACTGGGAAGGAGTGAGTATCGGTGGGCTGATT AGTACTGGCTCCCACGGGAGTTCGTGGTCTGGACGAGGTGGTTCGGTTCATGACCATGTT GTCGGAATCAGCCTTGTGGTTCCGGCGAACCAATCAGAAGGTTTCGCGAAGGTTGTTAGA CTCGAAGAAGGGAGAGATGATACGCTTCTTAACGCCGTTAAAGTGTCGTTGGGTGTTTTA GGAGTCATTTCAAAGGTTAAGCTTTCGATAGAGAAAGCATTTAAGAGAAGTGTGACGTAC AACTTCACATCTGACGTAGCACTTGAAGACATTTTTATGGAGCATGGGAAAAAATACGAA TTCGGAGACATAACTTGGTATCCTTCTAGAAAAACTGCTGTTTACCGTTACGATATCCGA GCACCGGTCAATGTCTCCGGCAACGGAGTCAACGACTTTCTTGGTTTTCAGTCTAATCCT ATCTTGATCTCTAAAGGGGTACGAGCATTAGAGAAGGGGTTTGAATCTAGCAAGAATGAG AATGGAAAATGCACCACTGCAGATACTACGTTGGCATACAAGAAATTAATCGGGAACGGT TTAAAGAATAGTGGTTTAATCTTTACTGGATATCCGGTTATCGGAAGACAAGGCAAGATC CAGACTTCTGGGTCTTGTCTTTACTCATCTTCAATTAGAATTGATGTCGCTTGCGCATGG GACCCGAGATATAACGGTCTTTTCTTTTATGAAACGACTGCAATATTCCCAGTTTCTAGG TTTAGAGATTTTCTTCTCGACGTGAAGAAGCTACGAGACATGAAACCCGAAAGATTGTGC GGGATCGATATCTATAACGGTATCTTCATACGTTTCATAAAGGGCTCAAAGGCTTATCTT GGCCAGACAGAGGATTCAGTGGTCATTGACTTTAATTATTACCGAGCGGATGATGAGTTG ACCCCGAGGTTGAACCAAGATGTGATGGAGGAGATGGAGCAGATGGCGTTTGTCAAACAC GGCGCAAAGCCGCATTGGGGGAAGAATAGGAAAGTGGGTTTCTTCGGCGTGAAGCAAAAG ATTGGACCTAACTTTGATAAATTCTTGGAAGTAAAGAACAAGTTAGATCCTAAGAAGATG TTCTCTAGTGAATGGTCTGATGAGATTCTCTTAGGAACAGAAGCTTCCAAGTATGACGGA TGTGCCTTGGAAGGAAATTGTGTGTGTTCAGAAGAAAGACATTGTAACCCTTCCAAAGGT TACTTTTGTAAGGAAGGCCTTGTTTATACACAAGCTAGGGTTTGCAGATTCTCGCCAGCT CAAGTTATAGTGATGTAA

Peptide Sequence

PEP ID	AT5G11540.1
PEP Infomation	\| D-arabinono-1%2C4-lactone oxidase family protein \| Chr5:3703002-3704981 REVERSE LENGTH=585 \| 201606
Sequence	MRYSHTLQQFSILSFFVTIWTVQSVPPQPPIRCDQTGCTVSNAYGTWPDRKTCHAANVTY PTTEEDLRKAVAYAAEHNLKVKTVTKFSHTIPKLACPSGSDALLISTSKYNSVIEIEPEL LTVTADSGVSLRELIEKVEGAGFSIGTSPYWEGVSIGGLISTGSHGSSWSGRGGSVHDHV VGISLVVPANQSEGFAKVVRLEEGRDDTLLNAVKVSLGVLGVISKVKLSIEKAFKRSVTY NFTSDVALEDIFMEHGKKYEFGDITWYPSRKTAVYRYDIRAPVNVSGNGVNDFLGFQSNP ILISKGVRALEKGFESSKNENGKCTTADTTLAYKKLIGNGLKNSGLIFTGYPVIGRQGKI QTSGSCLYSSSIRIDVACAWDPRYNGLFFYETTAIFPVSRFRDFLLDVKKLRDMKPERLC GIDIYNGIFIRFIKGSKAYLGQTEDSVVIDFNYYRADDELTPRLNQDVMEEMEQMAFVKH GAKPHWGKNRKVGFFGVKQKIGPNFDKFLEVKNKLDPKKMFSSEWSDEILLGTEASKYDG CALEGNCVCSEERHCNPSKGYFCKEGLVYTQARVCRFSPAQVIVM

Transcript Sequence

Transcript ID	AT5G11540.1
Transcript Infomation	\| D-arabinono-1%2C4-lactone oxidase family protein \| Chr5:3702700-3705129 REVERSE LENGTH=2208 \| 201606
Sequence	CTTAAATATAAAAAGATCCGGCAATATTGATTTCCTTCTAAGCAATATTTTCAATCTTCA AACGCATTTATACATAGTTAACATAACCTCCAAAACAAAAATATCACAGATCCAAAAGAT CGGATTAACATAATCTCTCCAAATAATCATGCGTTACTCTCATACTCTCCAGCAGTTCTC AATTCTATCTTTCTTCGTTACAATATGGACCGTTCAATCAGTACCACCACAACCACCGAT TCGATGCGACCAAACCGGCTGCACCGTCTCCAACGCGTACGGCACGTGGCCTGACCGCAA AACCTGTCACGCGGCTAACGTCACATACCCAACGACGGAGGAAGACCTTCGTAAAGCCGT TGCTTACGCGGCTGAGCACAATCTCAAAGTCAAAACCGTCACCAAATTCTCTCACACCAT ACCGAAACTCGCTTGTCCTTCAGGTTCAGACGCATTGCTAATTAGTACGTCGAAATATAA TTCGGTTATCGAGATTGAACCGGAACTGTTAACGGTCACGGCTGATTCTGGAGTTTCGTT GAGAGAGCTGATCGAGAAAGTTGAAGGAGCTGGGTTTAGCATCGGAACGTCACCGTACTG GGAAGGAGTGAGTATCGGTGGGCTGATTAGTACTGGCTCCCACGGGAGTTCGTGGTCTGG ACGAGGTGGTTCGGTTCATGACCATGTTGTCGGAATCAGCCTTGTGGTTCCGGCGAACCA ATCAGAAGGTTTCGCGAAGGTTGTTAGACTCGAAGAAGGGAGAGATGATACGCTTCTTAA CGCCGTTAAAGTGTCGTTGGGTGTTTTAGGAGTCATTTCAAAGGTTAAGCTTTCGATAGA GAAAGCATTTAAGAGAAGTGTGACGTACAACTTCACATCTGACGTAGCACTTGAAGACAT TTTTATGGAGCATGGGAAAAAATACGAATTCGGAGACATAACTTGGTATCCTTCTAGAAA AACTGCTGTTTACCGTTACGATATCCGAGCACCGGTCAATGTCTCCGGCAACGGAGTCAA CGACTTTCTTGGTTTTCAGTCTAATCCTATCTTGATCTCTAAAGGGGTACGAGCATTAGA GAAGGGGTTTGAATCTAGCAAGAATGAGAATGGAAAATGCACCACTGCAGATACTACGTT GGCATACAAGAAATTAATCGGGAACGGTTTAAAGAATAGTGGTTTAATCTTTACTGGATA TCCGGTTATCGGAAGACAAGGCAAGATCCAGACTTCTGGGTCTTGTCTTTACTCATCTTC AATTAGAATTGATGTCGCTTGCGCATGGGACCCGAGATATAACGGTCTTTTCTTTTATGA AACGACTGCAATATTCCCAGTTTCTAGGTTTAGAGATTTTCTTCTCGACGTGAAGAAGCT ACGAGACATGAAACCCGAAAGATTGTGCGGGATCGATATCTATAACGGTATCTTCATACG TTTCATAAAGGGCTCAAAGGCTTATCTTGGCCAGACAGAGGATTCAGTGGTCATTGACTT TAATTATTACCGAGCGGATGATGAGTTGACCCCGAGGTTGAACCAAGATGTGATGGAGGA GATGGAGCAGATGGCGTTTGTCAAACACGGCGCAAAGCCGCATTGGGGGAAGAATAGGAA AGTGGGTTTCTTCGGCGTGAAGCAAAAGATTGGACCTAACTTTGATAAATTCTTGGAAGT AAAGAACAAGTTAGATCCTAAGAAGATGTTCTCTAGTGAATGGTCTGATGAGATTCTCTT AGGAACAGAAGCTTCCAAGTATGACGGATGTGCCTTGGAAGGAAATTGTGTGTGTTCAGA AGAAAGACATTGTAACCCTTCCAAAGGTTACTTTTGTAAGGAAGGCCTTGTTTATACACA AGCTAGGGTTTGCAGATTCTCGCCAGCTCAAGTTATAGTGATGTAACTCGAGTTTTGATG TTCAAACTATGTCATCCGGTGAAGAAATGATATAGAGACTGAAGTTACTATTCTTTCATC ATGAGTTTTCCAAGGATATAAATGTTTTATTAGGATCTCGTCTTGTACGGAAATGATCTG TTTTATCCATATTTAACTCTTTCAAAAGTATTTGCAAATTTTTAGTTTATTCCGTGGATT ATTACCCGTTTAACACCGTTGTCTGAACAAAAAAGAAAAATAATCCCTACCCTGCATACG TTTACCCGATAAAATAGAAAGGTTTTCATAACCGCAATAGAAGAAAAA