Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G10250.2
CDS Infomation	\| Phototropic-responsive NPH3 family protein \| Chr5:3217028-3219368 REVERSE LENGTH=1869 \| 201606
Sequence	ATGAATTCAGTATCAGCTGCAGAAAGGCTAAAGAGTTTTGGAGATGCTGGTCCAGTATGT AACAAAAGCATTATATTTCCAAGTAGAGTTGTTACATTAGCTAACAGCTTCGAGAAGAAA GACCGTTCCTGGTATGTCAAATCTCAAATCCCTACTGATCTGTCTATTCAAGTCAACGAT ATTACCTTCAAAGCACACAAGTTTCCTTTGATCTCCAAATGTGGTTACATAAGCTCTATT GAGCTAAAACCTTCAACTTCTGAGAATGGATATCATCTCAAGCTGGAAAACTTCCCAGGT GGAGCAGATACATTCGAGACCATTCTGAAATTTTGCTACAATCTCCCACTGGACTTGAAT CCTCTCAATGTAGCTCCACTGAGGTGTGCATCAGAATACTTGTACATGACTGAAGAGTTT GAAGCCGGGAATTTAATCTCCAAGACAGAAGCTTTCATCACTTTTGTAGTACTTGCCTCA TGGAGAGATACACTCACTGTTCTGAGATCCTGCACAAACTTATCTCCGTGGGCCGAAAAC CTCCAAATCGTAAGGAGATGCTGTGACTTGCTTGCTTGGAAAGCCTGCAATGATAACAAC ATACCAGAAGATGTTGTAGATAGAAATGAAAGATGCTTATACAATGACATAGCCACCCTT GACATTGATCACTTCATGAGGGTTATAACAACTATGAAAGCAAGACGTGCCAAGCCACAG ATTACAGGTAAAATCATCATGAAGTATGCAGATAACTTTTTGCCGGTAATCAATGATGAT TTGGAAGGTATAAAAGGTTACGGTTTAGGCAAGAATGAGTTGCAGTTCAGTGTGAACAGA GGAAGAATGGAGGAAAGCAACAGTTTAGGATGTCAAGAACATAAAGAAACTATTGAAAGT TTAGTCAGTGTACTTCCTCCACAATCGGGAGCAGTCTCATGTCACTTTCTCTTAAGGATG CTGAAAACATCAATTGTTTACTCTGCATCACCAGCTTTAATATCTGATCTTGAGAAACGG GTCGGCATGGCTTTGGAAGATGCTAATGTATGTGACCTCCTAATTCCTAACTTCAAAAAT GAAGAACAGCAAGAAAGAGTCAGCTCACCTGAGGTATACACTATATACAATGTGGATGTG GTTCACAGGATTTTTGAGTTTTTCTTGATGCATGAGCAACAACAAGTTCTAGGAAAGCCA AGCATATCCAAGCTCTTGGACAATTATTTAGCCGAGATTGCAAAAGATCCATATCTTCCC ATCACAAAGTTTCAGGTTCTAGCAGAAATGTTGCCGGAAAATGCTTGGAAATGTCATGAT GGTCTCTATAGAGCAATTGATATGTTTCTCAAGACTCATCCTTCATTGTCAGATCACGAT AGAAGAAGATTATGCAAAACAATGAACTGTGAGAAACTATCACTTGATGCATGCCTACAC GCTGCACAAAATGATCGGTTGCCTCTAAGAACTATCGTCCAGATCAATACTCAAGTGCTT TTCTCGGAACAAGTAAAGATGAGGATGATGATGCAAGACAAGCTACCAGAGAAGGAGGAA GAAAATTCTGGAGGTCGTGAGGATAAACGAATGTCTAGAGATAATGAAATCATCAAGACA CTTAAGGAAGAGTTAGAAAATGTGAAGAAGAAGATGTCAGAGCTTCAGAGCGATTACAAT GAGCTTCAACAAGAGTATGAAAGGCTAAGTAGCAAACAGAAGAGCTCACATAACTGGGGA TTGCGTTGGCAAAAGGTGAAGAAATCGTTCCAGACAAAACGAGAAGATGAGGAAACAAGA GAGAGGACACGAAGAAGAAGTTCCACGGGACAAAGAACTAGTTTCAGGAGGAGAATGTCA ATGTCATAA

Peptide Sequence

PEP ID	AT5G10250.2
PEP Infomation	\| Phototropic-responsive NPH3 family protein \| Chr5:3217028-3219368 REVERSE LENGTH=622 \| 201606
Sequence	MNSVSAAERLKSFGDAGPVCNKSIIFPSRVVTLANSFEKKDRSWYVKSQIPTDLSIQVND ITFKAHKFPLISKCGYISSIELKPSTSENGYHLKLENFPGGADTFETILKFCYNLPLDLN PLNVAPLRCASEYLYMTEEFEAGNLISKTEAFITFVVLASWRDTLTVLRSCTNLSPWAEN LQIVRRCCDLLAWKACNDNNIPEDVVDRNERCLYNDIATLDIDHFMRVITTMKARRAKPQ ITGKIIMKYADNFLPVINDDLEGIKGYGLGKNELQFSVNRGRMEESNSLGCQEHKETIES LVSVLPPQSGAVSCHFLLRMLKTSIVYSASPALISDLEKRVGMALEDANVCDLLIPNFKN EEQQERVSSPEVYTIYNVDVVHRIFEFFLMHEQQQVLGKPSISKLLDNYLAEIAKDPYLP ITKFQVLAEMLPENAWKCHDGLYRAIDMFLKTHPSLSDHDRRRLCKTMNCEKLSLDACLH AAQNDRLPLRTIVQINTQVLFSEQVKMRMMMQDKLPEKEEENSGGREDKRMSRDNEIIKT LKEELENVKKKMSELQSDYNELQQEYERLSSKQKSSHNWGLRWQKVKKSFQTKREDEETR ERTRRRSSTGQRTSFRRRMSMS

Transcript Sequence

Transcript ID	AT5G10250.2
Transcript Infomation	\| Phototropic-responsive NPH3 family protein \| Chr5:3216881-3219436 REVERSE LENGTH=2084 \| 201606
Sequence	GACACATAGTTTACACTTCTAGTAGTTTTAGATAACCCCGTTTTCTTTGTTTTGCAGATC ATAAGGGAATGAATTCAGTATCAGCTGCAGAAAGGCTAAAGAGTTTTGGAGATGCTGGTC CAGTATGTAACAAAAGCATTATATTTCCAAGTAGAGTTGTTACATTAGCTAACAGCTTCG AGAAGAAAGACCGTTCCTGGTATGTCAAATCTCAAATCCCTACTGATCTGTCTATTCAAG TCAACGATATTACCTTCAAAGCACACAAGTTTCCTTTGATCTCCAAATGTGGTTACATAA GCTCTATTGAGCTAAAACCTTCAACTTCTGAGAATGGATATCATCTCAAGCTGGAAAACT TCCCAGGTGGAGCAGATACATTCGAGACCATTCTGAAATTTTGCTACAATCTCCCACTGG ACTTGAATCCTCTCAATGTAGCTCCACTGAGGTGTGCATCAGAATACTTGTACATGACTG AAGAGTTTGAAGCCGGGAATTTAATCTCCAAGACAGAAGCTTTCATCACTTTTGTAGTAC TTGCCTCATGGAGAGATACACTCACTGTTCTGAGATCCTGCACAAACTTATCTCCGTGGG CCGAAAACCTCCAAATCGTAAGGAGATGCTGTGACTTGCTTGCTTGGAAAGCCTGCAATG ATAACAACATACCAGAAGATGTTGTAGATAGAAATGAAAGATGCTTATACAATGACATAG CCACCCTTGACATTGATCACTTCATGAGGGTTATAACAACTATGAAAGCAAGACGTGCCA AGCCACAGATTACAGGTAAAATCATCATGAAGTATGCAGATAACTTTTTGCCGGTAATCA ATGATGATTTGGAAGGTATAAAAGGTTACGGTTTAGGCAAGAATGAGTTGCAGTTCAGTG TGAACAGAGGAAGAATGGAGGAAAGCAACAGTTTAGGATGTCAAGAACATAAAGAAACTA TTGAAAGTTTAGTCAGTGTACTTCCTCCACAATCGGGAGCAGTCTCATGTCACTTTCTCT TAAGGATGCTGAAAACATCAATTGTTTACTCTGCATCACCAGCTTTAATATCTGATCTTG AGAAACGGGTCGGCATGGCTTTGGAAGATGCTAATGTATGTGACCTCCTAATTCCTAACT TCAAAAATGAAGAACAGCAAGAAAGAGTCAGCTCACCTGAGGTATACACTATATACAATG TGGATGTGGTTCACAGGATTTTTGAGTTTTTCTTGATGCATGAGCAACAACAAGTTCTAG GAAAGCCAAGCATATCCAAGCTCTTGGACAATTATTTAGCCGAGATTGCAAAAGATCCAT ATCTTCCCATCACAAAGTTTCAGGTTCTAGCAGAAATGTTGCCGGAAAATGCTTGGAAAT GTCATGATGGTCTCTATAGAGCAATTGATATGTTTCTCAAGACTCATCCTTCATTGTCAG ATCACGATAGAAGAAGATTATGCAAAACAATGAACTGTGAGAAACTATCACTTGATGCAT GCCTACACGCTGCACAAAATGATCGGTTGCCTCTAAGAACTATCGTCCAGATCAATACTC AAGTGCTTTTCTCGGAACAAGTAAAGATGAGGATGATGATGCAAGACAAGCTACCAGAGA AGGAGGAAGAAAATTCTGGAGGTCGTGAGGATAAACGAATGTCTAGAGATAATGAAATCA TCAAGACACTTAAGGAAGAGTTAGAAAATGTGAAGAAGAAGATGTCAGAGCTTCAGAGCG ATTACAATGAGCTTCAACAAGAGTATGAAAGGCTAAGTAGCAAACAGAAGAGCTCACATA ACTGGGGATTGCGTTGGCAAAAGGTGAAGAAATCGTTCCAGACAAAACGAGAAGATGAGG AAACAAGAGAGAGGACACGAAGAAGAAGTTCCACGGGACAAAGAACTAGTTTCAGGAGGA GAATGTCAATGTCATAAGCCCTAACTTGTGTTTTACGGAATTAAACCAATCAATCATAGT CTCTGCCAAAAAATGTCAGCTTAATGTCAATGTCATAAGCCCTAACTTGTGTTTTACGGA ATTAAACCAATCAATCATAGTCTCTGCCAAAAAAATGTCAGCTT