Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G10090.1
CDS Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr5:3153722-3155745 REVERSE LENGTH=1785 \| 201606
Sequence	ATGGCAGATAATCCAGTGGAGAAAAAGTCGCGTTGTCGGTTTTTGGGGTTTGTGTTTAAC AGACGTGGCTTGTGGTCCAAGAAATGTCCCGCGGACAATGGTAGCCATAAAAGCACAATG AGTAGCAGCAATGCCTCCACCGCAACCGCTACCACCGCTAACATTCAGTTCACCAAATCT CCATGTACCGAATTTAACCCGAGGAAGCTTCAAGAAAATAAAGTTTTACCTGAGCCGATC GAGGTCCAGAACCAGGTACAAAGACCTGTTTCAAAACCCTCATCGCATCAATACCCAAAT AACAATCAGTTAGGCAGTAATGGGAATAACCAACCAAGTAATAATAATCAAGGACCAGTC CAACAACAACAAGCGAGGAAGGTTCCGAGGGAAGCAATTGGTTTATCAGGTGAGCTAGAG AGCATGATCATCGATAATCAGAAAGCAAAAGGGAATAATGGCTCTATGGTTCGAGCTTCT TCAAGCAATGTGATGTTGTTTGGCAATCTTGGGAACTTGAAGCAGCCTGGACCATCGGGT GGGAATCAAACTACTATCCAGAACAATGGATACGGGAACACTGGTGGAGGGTATGGAGTG AAGAAGACGTTAGAGGAGGAAAGAAAAACATCGGTTGCACAAATACCGGCTTCAAATAAC CAAGACCAGTCAGGATCTTTGTGTAGAGCGATTTCCACACGAATGGATCCCGAAACGTTA AAGATAATGGGTAATGAAGATTATAAGAACGGGAATTTCGCAGAGGCGTTAGCCTTGTAT GAAGCTGCAATATCCATCGATCCAAAAAAGGCTTCTTATCGTAGCAACAAAAGCGCGGCT TTAACGGCATTGGGGAGAATTCTGGAGGCGGTATTTGAGTGTAGAGAAGCAATCAGAATC GATCCTCATTACCATAGAGCACACCATCGGTTGGCTAACTTGTACCTCAGGTTAGGAGAG GTGGAGAATTCAATATATCATTTCAAGCATGCGGGTCCAGAAGCTGACCAAGAAGACATT TCAAAGGCTAAAATGGTTCAAACACATCTCAACAAATGTACAGAGGCTAAGAGATTACGA GATTGGAACACTTTGATCAAAGAAACAGAAAACACCATAACTACAGGCGCTGATGCAGCT CCTCAAGTATATGCATTGCAAGCAGAGGCCTTTTTGAAGACATACAGACATCAAGAGGCC GACGATGCTTTGTCTAGATGCCCGGTTTTCGATGGGGAAATGAGCACAAAGTATTACGGA TCGATCGGTTACGCTGGTTTCTTGGTCGTTTGGGCTCAAGTTCACATGGCATCCGGCAGA TTCGTAGAGGCTGTTGAGGCTATTCAACGAGCTGGCAAGTTGGATGGTAACAACAGGGAA GTGAGTATGGTTCTCCGGCGTGCGCAGGCGGTTACAGCAGCGCGATCACGAGGAAACGAT TTCTTTAAAGCCGGACGATTTCAAGAAGCTTGTACGGCTTATGGCGAAGGGTTAGACCAC GACTCAAGAAACTCAGTCTTGCTATGTAACAGAGCGGCTTGCCTATCCAAAATGGGCCAG TTCGATAGAGCCGTTGAGGATACATCAGCGGCACTAGCCGTCCGTCCTGGCTACACCAAG GCTCGACTCAGAAGAGCCGATTGTAACGCTAAGCTTGGGAATTGGGAATCGGCGGTTGGA GATTACGAGATATTGAGAAAAGAGACACCGGAAGATGAGGAAGTGATAAAAGGATTGTCG GAGGCACAGAAGCAGCTCGTGAAACGCCGTGGCCATGACTCTTGA

Peptide Sequence

PEP ID	AT5G10090.1
PEP Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr5:3153722-3155745 REVERSE LENGTH=594 \| 201606
Sequence	MADNPVEKKSRCRFLGFVFNRRGLWSKKCPADNGSHKSTMSSSNASTATATTANIQFTKS PCTEFNPRKLQENKVLPEPIEVQNQVQRPVSKPSSHQYPNNNQLGSNGNNQPSNNNQGPV QQQQARKVPREAIGLSGELESMIIDNQKAKGNNGSMVRASSSNVMLFGNLGNLKQPGPSG GNQTTIQNNGYGNTGGGYGVKKTLEEERKTSVAQIPASNNQDQSGSLCRAISTRMDPETL KIMGNEDYKNGNFAEALALYEAAISIDPKKASYRSNKSAALTALGRILEAVFECREAIRI DPHYHRAHHRLANLYLRLGEVENSIYHFKHAGPEADQEDISKAKMVQTHLNKCTEAKRLR DWNTLIKETENTITTGADAAPQVYALQAEAFLKTYRHQEADDALSRCPVFDGEMSTKYYG SIGYAGFLVVWAQVHMASGRFVEAVEAIQRAGKLDGNNREVSMVLRRAQAVTAARSRGND FFKAGRFQEACTAYGEGLDHDSRNSVLLCNRAACLSKMGQFDRAVEDTSAALAVRPGYTK ARLRRADCNAKLGNWESAVGDYEILRKETPEDEEVIKGLSEAQKQLVKRRGHDS

Transcript Sequence

Transcript ID	AT5G10090.1
Transcript Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr5:3153494-3156249 REVERSE LENGTH=2517 \| 201606
Sequence	ACAAATCTGAGGTTCATTTTCTGTTTCTCTCAATACCAGGTCAACATGCAATAGCCATAA GAAAAAAGAGAGACAAACAACAACAGAAAAAGAGAGAGAGGGGAAAAGAAATCTTGAATT GACAGAACAGAACAGAACAGAAGACAAACCCATCACCAAAGTCTATTGAGAATTTGATAT CGATTTGAGAAGAGAAAAATTAATTGTTCTTGTTCTTTTCATTATTTAATTTTGACCTAT TTTTAGTTGTTCCTTTTTTGCATTTCTTCTTAACCTAGTTTGATCATAATGCCATTTTGT ATGGAACTATTGATTCAAGAAGAGGAAACGCAGCAAAAGAAGCTTCCTATATCTCTTATC TCCTCTTAACAATGTTGTCCTCTTCTGTAAATACAAACCATTAAGCTCTGTTTCGTTATA TTTCTATCTTCCTGCACTACCCCTTTCTTGGGGTTCCATTGATTGTTCTGTGGCGGGGTT TCGGTTCTATCTAGAGGTGGAAGGATGGCAGATAATCCAGTGGAGAAAAAGTCGCGTTGT CGGTTTTTGGGGTTTGTGTTTAACAGACGTGGCTTGTGGTCCAAGAAATGTCCCGCGGAC AATGGTAGCCATAAAAGCACAATGAGTAGCAGCAATGCCTCCACCGCAACCGCTACCACC GCTAACATTCAGTTCACCAAATCTCCATGTACCGAATTTAACCCGAGGAAGCTTCAAGAA AATAAAGTTTTACCTGAGCCGATCGAGGTCCAGAACCAGGTACAAAGACCTGTTTCAAAA CCCTCATCGCATCAATACCCAAATAACAATCAGTTAGGCAGTAATGGGAATAACCAACCA AGTAATAATAATCAAGGACCAGTCCAACAACAACAAGCGAGGAAGGTTCCGAGGGAAGCA ATTGGTTTATCAGGTGAGCTAGAGAGCATGATCATCGATAATCAGAAAGCAAAAGGGAAT AATGGCTCTATGGTTCGAGCTTCTTCAAGCAATGTGATGTTGTTTGGCAATCTTGGGAAC TTGAAGCAGCCTGGACCATCGGGTGGGAATCAAACTACTATCCAGAACAATGGATACGGG AACACTGGTGGAGGGTATGGAGTGAAGAAGACGTTAGAGGAGGAAAGAAAAACATCGGTT GCACAAATACCGGCTTCAAATAACCAAGACCAGTCAGGATCTTTGTGTAGAGCGATTTCC ACACGAATGGATCCCGAAACGTTAAAGATAATGGGTAATGAAGATTATAAGAACGGGAAT TTCGCAGAGGCGTTAGCCTTGTATGAAGCTGCAATATCCATCGATCCAAAAAAGGCTTCT TATCGTAGCAACAAAAGCGCGGCTTTAACGGCATTGGGGAGAATTCTGGAGGCGGTATTT GAGTGTAGAGAAGCAATCAGAATCGATCCTCATTACCATAGAGCACACCATCGGTTGGCT AACTTGTACCTCAGGTTAGGAGAGGTGGAGAATTCAATATATCATTTCAAGCATGCGGGT CCAGAAGCTGACCAAGAAGACATTTCAAAGGCTAAAATGGTTCAAACACATCTCAACAAA TGTACAGAGGCTAAGAGATTACGAGATTGGAACACTTTGATCAAAGAAACAGAAAACACC ATAACTACAGGCGCTGATGCAGCTCCTCAAGTATATGCATTGCAAGCAGAGGCCTTTTTG AAGACATACAGACATCAAGAGGCCGACGATGCTTTGTCTAGATGCCCGGTTTTCGATGGG GAAATGAGCACAAAGTATTACGGATCGATCGGTTACGCTGGTTTCTTGGTCGTTTGGGCT CAAGTTCACATGGCATCCGGCAGATTCGTAGAGGCTGTTGAGGCTATTCAACGAGCTGGC AAGTTGGATGGTAACAACAGGGAAGTGAGTATGGTTCTCCGGCGTGCGCAGGCGGTTACA GCAGCGCGATCACGAGGAAACGATTTCTTTAAAGCCGGACGATTTCAAGAAGCTTGTACG GCTTATGGCGAAGGGTTAGACCACGACTCAAGAAACTCAGTCTTGCTATGTAACAGAGCG GCTTGCCTATCCAAAATGGGCCAGTTCGATAGAGCCGTTGAGGATACATCAGCGGCACTA GCCGTCCGTCCTGGCTACACCAAGGCTCGACTCAGAAGAGCCGATTGTAACGCTAAGCTT GGGAATTGGGAATCGGCGGTTGGAGATTACGAGATATTGAGAAAAGAGACACCGGAAGAT GAGGAAGTGATAAAAGGATTGTCGGAGGCACAGAAGCAGCTCGTGAAACGCCGTGGCCAT GACTCTTGAAAATCTCCCGGCGATTAAAAAACCGCCGTGAGAACGATCGGGAAGTTACGG ATTTAGATAACAACCCCGTGATCTTGCTTTTTTTTTTTTTTTTGTTTGGCCGGTTAAAAA ACAAAAGTGAATCTTTTTTTTTATTCAATTGATTCAATTGTATATCCATAAAAGTCTATT AATCATTTGATAACCGAAGTTTGCAGACGTTAAATAAATAATTTAGAACAAAAATTT