Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G08280.1
CDS Infomation	\| hydroxymethylbilane synthase \| Chr5:2663763-2665596 REVERSE LENGTH=1149 \| 201606
Sequence	ATGGATATTGCTTCGTCATCTCTCTCACAAGCTCACAAAGTCGTTCTCACGCGTCAACCT TCTTCCCGGGTCAACACCTGCTCCCTTGGCTCGGTCTCCGCTATCGGATTCTCTCTTCCG CAGATTAGCTCTCCAGCTTTAGGTAAATGTCGCCGGAAACAAAGCTCTTCTGGGTTCGTG AAAGCTTGTGTTGCTGTTGAACAGAAAACCCGAACTGCTATCATCAGAATTGGCACAAGG GGAAGTCCTCTAGCACTTGCTCAAGCATACGAGACGCGAGAAAAGCTCAAGAAGAAACAC CCTGAACTCGTTGAAGATGGAGCTATTCATATCGAGATCATTAAAACGACTGGTGATAAG ATTCTTTCGCAACCGCTTGCTGATATTGGTGGGAAAGGACTTTTCACCAAAGAAATAGAC GAGGCCTTGATAAATGGTCATATTGACATAGCTGTGCACTCAATGAAAGATGTCCCAACT TACTTACCAGAAAAAACGATTTTACCTTGTAACCTTCCGCGTGAGGATGTTCGAGATGCG TTTATTTGTCTAACTGCAGCCACGTTAGCTGAGCTTCCAGCTGGAAGCGTTGTGGGAACA GCTTCTCTCAGGAGAAAATCGCAGATTCTCCACAAATATCCTGCATTACATGTTGAGGAA AACTTCAGGGGTAATGTGCAGACAAGACTATCAAAACTACAAGGAGGAAAGGTCCAAGCA ACTCTATTAGCACTAGCTGGTCTTAAGAGATTGAGTATGACAGAGAATGTCGCATCTATC TTATCTCTCGATGAAATGCTTCCAGCTGTTGCTCAAGGAGCTATTGGAATTGCCTGTAGA ACTGATGATGATAAAATGGCAACTTACTTAGCCTCACTGAACCACGAGGAAACAAGACTA GCGATTTCATGCGAGAGAGCTTTTCTTGAAACGCTAGATGGCTCATGCCGTACTCCTATT GCTGGATACGCATCCAAGGACGAAGAAGGCAACTGCATTTTCAGAGGATTGGTTGCTTCC CCTGACGGTACTAAAGTTCTTGAGACCTCAAGAAAAGGTCCATACGTGTATGAAGACATG GTGAAGATGGGAAAAGACGCGGGGCAAGAATTGCTATCTCGTGCTGGTCCTGGCTTCTTC GGCAACTGA

Peptide Sequence

PEP ID	AT5G08280.1
PEP Infomation	\| hydroxymethylbilane synthase \| Chr5:2663763-2665596 REVERSE LENGTH=382 \| 201606
Sequence	MDIASSSLSQAHKVVLTRQPSSRVNTCSLGSVSAIGFSLPQISSPALGKCRRKQSSSGFV KACVAVEQKTRTAIIRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDK ILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDA FICLTAATLAELPAGSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQA TLLALAGLKRLSMTENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRL AISCERAFLETLDGSCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDM VKMGKDAGQELLSRAGPGFFGN

Transcript Sequence

Transcript ID	AT5G08280.1
Transcript Infomation	\| hydroxymethylbilane synthase \| Chr5:2663499-2665826 REVERSE LENGTH=1643 \| 201606
Sequence	GTGATTAAGGTAGTAGAACACCATAATCTGGTATGAGTCATTCGTAGAGGAATAAAGCTC TAAAATCTAATTATCCTATCCAATATCCTCTCATAGAGGTGAGAGCTAAGATTTTCCCAT CAACTCCATTTGAAGCGAAATTCTCTGATCTCTCTTCATTTTATTTTCCCTCTACATCTC TCCCAACGATTTCCAAATCTCACTTCACTTTGGCTCCTCCACCTGAATCCATGGATATTG CTTCGTCATCTCTCTCACAAGCTCACAAAGTCGTTCTCACGCGTCAACCTTCTTCCCGGG TCAACACCTGCTCCCTTGGCTCGGTCTCCGCTATCGGATTCTCTCTTCCGCAGATTAGCT CTCCAGCTTTAGGTAAATGTCGCCGGAAACAAAGCTCTTCTGGGTTCGTGAAAGCTTGTG TTGCTGTTGAACAGAAAACCCGAACTGCTATCATCAGAATTGGCACAAGGGGAAGTCCTC TAGCACTTGCTCAAGCATACGAGACGCGAGAAAAGCTCAAGAAGAAACACCCTGAACTCG TTGAAGATGGAGCTATTCATATCGAGATCATTAAAACGACTGGTGATAAGATTCTTTCGC AACCGCTTGCTGATATTGGTGGGAAAGGACTTTTCACCAAAGAAATAGACGAGGCCTTGA TAAATGGTCATATTGACATAGCTGTGCACTCAATGAAAGATGTCCCAACTTACTTACCAG AAAAAACGATTTTACCTTGTAACCTTCCGCGTGAGGATGTTCGAGATGCGTTTATTTGTC TAACTGCAGCCACGTTAGCTGAGCTTCCAGCTGGAAGCGTTGTGGGAACAGCTTCTCTCA GGAGAAAATCGCAGATTCTCCACAAATATCCTGCATTACATGTTGAGGAAAACTTCAGGG GTAATGTGCAGACAAGACTATCAAAACTACAAGGAGGAAAGGTCCAAGCAACTCTATTAG CACTAGCTGGTCTTAAGAGATTGAGTATGACAGAGAATGTCGCATCTATCTTATCTCTCG ATGAAATGCTTCCAGCTGTTGCTCAAGGAGCTATTGGAATTGCCTGTAGAACTGATGATG ATAAAATGGCAACTTACTTAGCCTCACTGAACCACGAGGAAACAAGACTAGCGATTTCAT GCGAGAGAGCTTTTCTTGAAACGCTAGATGGCTCATGCCGTACTCCTATTGCTGGATACG CATCCAAGGACGAAGAAGGCAACTGCATTTTCAGAGGATTGGTTGCTTCCCCTGACGGTA CTAAAGTTCTTGAGACCTCAAGAAAAGGTCCATACGTGTATGAAGACATGGTGAAGATGG GAAAAGACGCGGGGCAAGAATTGCTATCTCGTGCTGGTCCTGGCTTCTTCGGCAACTGAG CCATTCGAAGAAGAGGAGGAAGAGATGTGACACGGACAAAGTCTAGTGTTTAGGAGTGAT TCAACATCTTGAAGTCCCGTTTCTTCCTCCGAACTGTTGTAACTTTTTTGATTTTGAGAG AAACATGACCTTTTGTTTATTGATTGTTTTGTTGTATTTAGATTAAATTCATCTTGCAAT TGTACCCCTTTTTTTCTGTCCCACGATGAAACTAGTACACAAGAAATTAGAGAGACAAAA TAAAATCCAGAGACTTCAGCTTC