Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G07340.2
CDS Infomation

| Calreticulin family protein | Chr5:2317300-2319458 FORWARD LENGTH=1623 | 201606
Sequence

ATGAGAGAACGGATTATTACATTCGTTTCGCTGCTTCTTGTAGCTTTGCTTTCGTTTCCC
AGTGTTAGCTACTGTGACGACCAAACGGTGATTGGTCACTTCCTTGAAAAAATCCTGTAT
GAATCGTTTGACGAGCCTTTTGATGGTCGCTGGGTCGTTTCAGAGAAAGCTGAATACCAA
GGTGTGTGGAAGCACGAGAAGAGTGAAGGGCATGATGATTATGGACTTCTAGTGAGTGAG
AAAGCTAAGAAGTACGGAATAGTTAAAGAGCTTGATGTTGATGAGCCTCTAAACCTTAAC
GAAGGAACTGTTGTTCTTCAATACGAGGCTCGTTTCCAAGAAGGGCTTGAGTGTGGTGGT
GCTTACTTAAAGTATCTTCGTCCTCAAGAAGCTGGATGGGTTCCTCAAGGGTTTGATAAT
GATTCTCCTTACTCTATCATGTTTGGACCTGATAAGTGTGGTGCTACCAACAAGGTTCAT
TTCATCTTGAAGCATAAGAATCCCAAGAGTGGCGAGTTTGTTGAGCACCATCTCAAGTTC
CCTCCTTCTGTTCCGTTTGACATGCTTTCTCATGTCTACACTGCGGTCTTGAAATCTGAT
AATGAGGTGAGGATTTTGGTCGATGGTGAGGAGAAGAAGAAGGGTAATTTACTGTCTGCT
GAAGACTTTGAGCCTCCGTTGATTCCTTCCAAGACCATCCCTGATCCAGAGGACAAGAAG
CCAGAAGACTGGGATGAGAGAGCCAAGATTCCTGATCCTAATGCTGTGAAGCCTGATGAC
TGGGATGAGGATGCACCCATGGAGATTGAAGATGAGGAAGCTGAGAAACCCGAAGGATGG
TTGGATGATGAGCCTGTAGAGGTTGAAGACCCCGAGGCAAGCAAGCCAGAAGATTGGGAT
GACGAGGAAGATGGTGAGTGGGAGGCTCCTAAGGTTTCCAACACCAAGTGTGAGGCAGCA
CCCGGATGTGGCGAATGGAAGAGACCGATGAAGAGGAACCCTGCTTACAAGGGCAAATGG
AGCTCACCTCTCATAGATAACCCAGCTTACAAGGGAATCTGGAAACCAAGAGACATTCCA
AATCCTGATTATTTTGAGCTTGAGAGGCCGAATTTGGAGCCCATTGCTGCCATTGGTATT
GAGATATGGACAATGCAAGACGGTATCTTATTTGACAACATCTTGATATCTAAAGACGAG
AAGGTTGCTGAAACTTACAGACAAAGCACTTGGAAGCCCAAGTTTGATGTGGAGAAAGAG
AAACAAAAGGCAGAGGATGAAGCTGCTGGTGAGGCAGATGGTCTCAAGAGTTACCAGAAG
AAGGTGTTCGACCTCTTGTACAAGGTTGCAGACATTTCTTTCCTTAGTGCGTACAAGTCA
AAGATTATGGAACTTATTGAGAAAGCTGAAACACAGCCAAACTTAACCATCGGTGTGCTC
ATTTCCATCGTGATCGTCTTCCTCTCTCTCTTCTTCAAGCTCATATTTGGTGGTGCAAAG
GCTAAGGTAGAAAAGAAGAAACCGGAAACAGCTGCAGAGACCTCGACAAGCGAGGCAAAG
ACAGAGGAGAAAGCAGAAGCGGTGGCTGCACCACGAAAGAGGCAGACGAGGCGTGAGAGT
TAG

Peptide Sequence

PEP ID

AT5G07340.2
PEP Infomation

| Calreticulin family protein | Chr5:2317300-2319458 FORWARD LENGTH=540 | 201606
Sequence

MRERIITFVSLLLVALLSFPSVSYCDDQTVIGHFLEKILYESFDEPFDGRWVVSEKAEYQ
GVWKHEKSEGHDDYGLLVSEKAKKYGIVKELDVDEPLNLNEGTVVLQYEARFQEGLECGG
AYLKYLRPQEAGWVPQGFDNDSPYSIMFGPDKCGATNKVHFILKHKNPKSGEFVEHHLKF
PPSVPFDMLSHVYTAVLKSDNEVRILVDGEEKKKGNLLSAEDFEPPLIPSKTIPDPEDKK
PEDWDERAKIPDPNAVKPDDWDEDAPMEIEDEEAEKPEGWLDDEPVEVEDPEASKPEDWD
DEEDGEWEAPKVSNTKCEAAPGCGEWKRPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIP
NPDYFELERPNLEPIAAIGIEIWTMQDGILFDNILISKDEKVAETYRQSTWKPKFDVEKE
KQKAEDEAAGEADGLKSYQKKVFDLLYKVADISFLSAYKSKIMELIEKAETQPNLTIGVL
ISIVIVFLSLFFKLIFGGAKAKVEKKKPETAAETSTSEAKTEEKAEAVAAPRKRQTRRES

Transcript Sequence

Transcript ID

AT5G07340.2
Transcript Infomation

| Calreticulin family protein | Chr5:2317213-2319649 FORWARD LENGTH=1901 | 201606
Sequence

GATCTACTTAGTACTTACTTAGTAGTTACTTCTCTGTCTTATTTGATTTTGAGTCTCTGT
TTTGTCTCTTCTCTTGAGATTGCGATAATGAGAGAACGGATTATTACATTCGTTTCGCTG
CTTCTTGTAGCTTTGCTTTCGTTTCCCAGTGTTAGCTACTGTGACGACCAAACGGTGATT
GGTCACTTCCTTGAAAAAATCCTGTATGAATCGTTTGACGAGCCTTTTGATGGTCGCTGG
GTCGTTTCAGAGAAAGCTGAATACCAAGGTGTGTGGAAGCACGAGAAGAGTGAAGGGCAT
GATGATTATGGACTTCTAGTGAGTGAGAAAGCTAAGAAGTACGGAATAGTTAAAGAGCTT
GATGTTGATGAGCCTCTAAACCTTAACGAAGGAACTGTTGTTCTTCAATACGAGGCTCGT
TTCCAAGAAGGGCTTGAGTGTGGTGGTGCTTACTTAAAGTATCTTCGTCCTCAAGAAGCT
GGATGGGTTCCTCAAGGGTTTGATAATGATTCTCCTTACTCTATCATGTTTGGACCTGAT
AAGTGTGGTGCTACCAACAAGGTTCATTTCATCTTGAAGCATAAGAATCCCAAGAGTGGC
GAGTTTGTTGAGCACCATCTCAAGTTCCCTCCTTCTGTTCCGTTTGACATGCTTTCTCAT
GTCTACACTGCGGTCTTGAAATCTGATAATGAGGTGAGGATTTTGGTCGATGGTGAGGAG
AAGAAGAAGGGTAATTTACTGTCTGCTGAAGACTTTGAGCCTCCGTTGATTCCTTCCAAG
ACCATCCCTGATCCAGAGGACAAGAAGCCAGAAGACTGGGATGAGAGAGCCAAGATTCCT
GATCCTAATGCTGTGAAGCCTGATGACTGGGATGAGGATGCACCCATGGAGATTGAAGAT
GAGGAAGCTGAGAAACCCGAAGGATGGTTGGATGATGAGCCTGTAGAGGTTGAAGACCCC
GAGGCAAGCAAGCCAGAAGATTGGGATGACGAGGAAGATGGTGAGTGGGAGGCTCCTAAG
GTTTCCAACACCAAGTGTGAGGCAGCACCCGGATGTGGCGAATGGAAGAGACCGATGAAG
AGGAACCCTGCTTACAAGGGCAAATGGAGCTCACCTCTCATAGATAACCCAGCTTACAAG
GGAATCTGGAAACCAAGAGACATTCCAAATCCTGATTATTTTGAGCTTGAGAGGCCGAAT
TTGGAGCCCATTGCTGCCATTGGTATTGAGATATGGACAATGCAAGACGGTATCTTATTT
GACAACATCTTGATATCTAAAGACGAGAAGGTTGCTGAAACTTACAGACAAAGCACTTGG
AAGCCCAAGTTTGATGTGGAGAAAGAGAAACAAAAGGCAGAGGATGAAGCTGCTGGTGAG
GCAGATGGTCTCAAGAGTTACCAGAAGAAGGTGTTCGACCTCTTGTACAAGGTTGCAGAC
ATTTCTTTCCTTAGTGCGTACAAGTCAAAGATTATGGAACTTATTGAGAAAGCTGAAACA
CAGCCAAACTTAACCATCGGTGTGCTCATTTCCATCGTGATCGTCTTCCTCTCTCTCTTC
TTCAAGCTCATATTTGGTGGTGCAAAGGCTAAGGTAGAAAAGAAGAAACCGGAAACAGCT
GCAGAGACCTCGACAAGCGAGGCAAAGACAGAGGAGAAAGCAGAAGCGGTGGCTGCACCA
CGAAAGAGGCAGACGAGGCGTGAGAGTTAGATAAAAAGAGGATTAGATTTTGATTTTTGG
GGCTTTTTGTTTTGATTTATCACCGTATAGACAAACAGTAGTGGACCTGATATTAAGACG
ATTATTGTAACATGTTTTTTTTGTATGCTTTTAGTTTCACATGAATCTGAATGTGGATCA
CAACATTTATGAGTTGAAATTTGATAAGTAATGGGTTGTGT