Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G07040.1
CDS Infomation

| RING/U-box superfamily protein | Chr5:2190344-2190823 FORWARD LENGTH=480 | 201606
Sequence

ATGTCTCCTATAAGTCCTCCTGCCAGTGGGGTTGGGCTTGGCTACGGTATAGCCATCGCC
GTAAGCATCTTGGTTCTCATATCTTTTATAATGCTGGCCTCATACATCTGCATAAGGTCA
AAATCTACAGGAAGAGACGAAGCCACTAGTGACGTAGTTCTTGACTTGCCGTCTCCCGCG
GCTGAGGTGAAGCTCGGTCTAGACCGGCCAGTGATAGAGTCATATCCAAGGATAGTGTTG
GGAGATAGCCGGAGATTACCGAGGCCCAACAACGGCCCATGTTCGATATGTCTATGTGAT
TACGAGGCTAGGGAACCCGTTCGGTGTATACCGGAATGTAATCACTGCTTCCACACTGAT
TGTGTTGATGAGTGGCTCCGGACAAGTGCTACGTGTCCTCTTTGTAGGAACTCACCGGCT
CCCTCTAGGCTAGCCACACCCTTATCCGACTTAGTCCCACTCGCCTTTCAAATCAGGTGA

Peptide Sequence

PEP ID

AT5G07040.1
PEP Infomation

| RING/U-box superfamily protein | Chr5:2190344-2190823 FORWARD LENGTH=159 | 201606
Sequence

MSPISPPASGVGLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPA
AEVKLGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTD
CVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLAFQIR

Transcript Sequence

Transcript ID

AT5G07040.1
Transcript Infomation

| RING/U-box superfamily protein | Chr5:2190247-2191266 FORWARD LENGTH=1020 | 201606
Sequence

ACTACGTCAAACTTGTCCCCTTCTCCTACAAACTCTCTTCGTCTTCCACATTTTTAAGTC
TCTCTCTAGCTCTCTCTCACTCACTCTCTCCACATATATGTCTCCTATAAGTCCTCCTGC
CAGTGGGGTTGGGCTTGGCTACGGTATAGCCATCGCCGTAAGCATCTTGGTTCTCATATC
TTTTATAATGCTGGCCTCATACATCTGCATAAGGTCAAAATCTACAGGAAGAGACGAAGC
CACTAGTGACGTAGTTCTTGACTTGCCGTCTCCCGCGGCTGAGGTGAAGCTCGGTCTAGA
CCGGCCAGTGATAGAGTCATATCCAAGGATAGTGTTGGGAGATAGCCGGAGATTACCGAG
GCCCAACAACGGCCCATGTTCGATATGTCTATGTGATTACGAGGCTAGGGAACCCGTTCG
GTGTATACCGGAATGTAATCACTGCTTCCACACTGATTGTGTTGATGAGTGGCTCCGGAC
AAGTGCTACGTGTCCTCTTTGTAGGAACTCACCGGCTCCCTCTAGGCTAGCCACACCCTT
ATCCGACTTAGTCCCACTCGCCTTTCAAATCAGGTGAAAGTTAAAGACCTTTTCTTACTC
CCTTGTGTGTTTGAGATTGAGAAATGAGTTAAAATTTGTTATATTTTAGGATTGAAGTTG
AAAGCTCAATAATAAAGGTCGTAAAATTTTCTAATGATTTGATAAAAAATGATATCTTAG
GATTTATTTATTTGCATGAATTTGCGACCTTACGATGTGACTCTTGGATCACTCTAGTTG
TAATACCGCGATCTCGTGATTCCGGTATGATCTTTACTGAGAGAGATTCCAGATTTGGTA
ACTTTGTACCTGTACACTTGGTAGGGTTATCATTTATCAAATCACATCTTTGTACAGATT
ATTTATGTATGTGCTGTGATTCTGTGATCTCCACTTTAATATGGGGATTCGAATATGGTT
TTCGTTTTTTTGTTTTCTTCATTTTTCTGTTTTTTTTCTTGAAGTTTTCTTTTAGATAAG