Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G06790.1
CDS Infomation

| cotton fiber protein | Chr5:2098088-2098717 REVERSE LENGTH=630 | 201606
Sequence

ATGGCAATGCCACTCAAATCAACATCTTCTTCTATGTCTTCTTCTCAATGTTCATCTTCT
TCTTCACCAACCTCAAGCTCCATGAAACTCAAATCCCTAATACAAACTCTCATCATTTCT
CAAGTTTGTCGGCTACTCCGAGAAATATCTAGAGTTTCATCCATTCTTGTTAGAGTCTTG
AGAAAGAAGCAATACAATTTCTTGTCAGTGTCTTCTTTACTCTATCCAAAGAGAGTCTCA
AAGAAACAAAAGAATAATATATTATTCGGCTCCTTCAGACTTCACTACAACTTTTGCTCC
TCTCACGTAGTGCCTGTCTCTGCGCCAGTGCGTCTCCCGGAAGAGCTCTACTTAGCTCAT
CTCGTACACGAATCGACTTGGGAGTCAATGTACTCCACTGAATCCATGGATGGTCGCGAT
GATGATGATCAAGAACCATCTCAGCTCTCTAGCTATCTAAGACAGCTAGAGGATAAAGTT
AAAGACGGCCAAGAAGAGGAGACAGAGACGATGATGAATGAGATTGATAAATTGGCTGAT
AGGTTTATAGCAAATTGCCATGAGAAGTTCATGTTGGAGAAAGTTGATTCATATAGGAGA
TCCCAAGGAACCCTGAATAGAAGCGGTTGA

Peptide Sequence

PEP ID

AT5G06790.1
PEP Infomation

| cotton fiber protein | Chr5:2098088-2098717 REVERSE LENGTH=209 | 201606
Sequence

MAMPLKSTSSSMSSSQCSSSSSPTSSSMKLKSLIQTLIISQVCRLLREISRVSSILVRVL
RKKQYNFLSVSSLLYPKRVSKKQKNNILFGSFRLHYNFCSSHVVPVSAPVRLPEELYLAH
LVHESTWESMYSTESMDGRDDDDQEPSQLSSYLRQLEDKVKDGQEEETETMMNEIDKLAD
RFIANCHEKFMLEKVDSYRRSQGTLNRSG

Transcript Sequence

Transcript ID

AT5G06790.1
Transcript Infomation

| cotton fiber protein | Chr5:2097669-2099055 REVERSE LENGTH=1387 | 201606
Sequence

CAAAGATGTGAAAATTGTAGTTGAAATAAAGAGAGTACAGACTACAGAGAAGCAATGATC
AGTGTCAGTTACTTGAATCTAAAGTCACTTCTTCTTTCTTTCTTTCAAATCTGAGATTTT
CCTAGTATTCGTTAAACACGTCAGATCAAGTGGGCTCACACACACCACCCCGACCACAAT
TAAACTCTCCAAAGTAGAGTGGCAATGGCATCCCTTTAAATAGTCCAAAAGTATAAGGAT
ATTTCAGTCAAACCCTTCTTCATAATATTTGATGTTCAACTAGAAATAAGCCTTTCCCAA
CCAAAGATTTAATTTGTAACAAGAGAAAGAGAGAGAGAATGGCAATGCCACTCAAATCAA
CATCTTCTTCTATGTCTTCTTCTCAATGTTCATCTTCTTCTTCACCAACCTCAAGCTCCA
TGAAACTCAAATCCCTAATACAAACTCTCATCATTTCTCAAGTTTGTCGGCTACTCCGAG
AAATATCTAGAGTTTCATCCATTCTTGTTAGAGTCTTGAGAAAGAAGCAATACAATTTCT
TGTCAGTGTCTTCTTTACTCTATCCAAAGAGAGTCTCAAAGAAACAAAAGAATAATATAT
TATTCGGCTCCTTCAGACTTCACTACAACTTTTGCTCCTCTCACGTAGTGCCTGTCTCTG
CGCCAGTGCGTCTCCCGGAAGAGCTCTACTTAGCTCATCTCGTACACGAATCGACTTGGG
AGTCAATGTACTCCACTGAATCCATGGATGGTCGCGATGATGATGATCAAGAACCATCTC
AGCTCTCTAGCTATCTAAGACAGCTAGAGGATAAAGTTAAAGACGGCCAAGAAGAGGAGA
CAGAGACGATGATGAATGAGATTGATAAATTGGCTGATAGGTTTATAGCAAATTGCCATG
AGAAGTTCATGTTGGAGAAAGTTGATTCATATAGGAGATCCCAAGGAACCCTGAATAGAA
GCGGTTGATAACGATGATGATGGGGCCTAATTTGTATCTTTCATTTCTTTTTATGTGATT
TCACTTTTTCCTTCTTTTCTTCTTTTGAAACTCCTCACATGCATAGTTTGAATTATCTGA
AAATGTGTATTGGAAGCATAGGGATATATGGATTGTGTGGTGTTTGTTGTGTTACAGTCT
AATGATGATGATATTGATGGTGGTGGTTTATAAACTAGAATAGACGACAGTCCAAAAAGG
AGAAGAGAGGATACAAATGGAATGGATTTTTGTAACTTTGGCTTTTGTGGTTTATGACGT
TCTTTTGCTACTATCTTCTGATATTGTTGTTTTCTTTTGGTTGTATACAACGGGACCAAT
TTCGATTTTCAGTTTACTTATCTGACTTTTCTAAGATCCATCAGAAATAAAATATTTCCT
TAAATAA