Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G06540.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:1999181-2001049 REVERSE LENGTH=1869 \| 201606
Sequence	ATGAGTAACATTGTGCTCAACACACTTCGATTCAAACACCCGAAGCTTGCCTTGCTCCAA TCCTGCTCTTCCTTTTCCGACCTCAAGATCATACATGGCTTTCTCTTACGAACCCATCTC ATCTCCGACGTCTTCGTTGCCAGTCGTCTCCTCGCTCTCTGCGTTGACGACTCCACCTTC AACAAACCAACCAATCTCTTGGGATATGCATACGGAATCTTCTCTCAGATTCAAAACCCT AATCTTTTCGTCTTCAATCTACTCATTCGCTGCTTCTCCACTGGTGCAGAGCCTAGTAAG GCTTTTGGGTTCTATACCCAGATGTTGAAATCTCGGATTTGGCCAGATAACATCACGTTT CCGTTTCTGATTAAGGCGTCTAGTGAGATGGAGTGTGTTCTAGTGGGAGAGCAAACGCAT TCACAGATTGTTAGATTCGGATTTCAGAATGATGTTTATGTAGAGAATTCGCTTGTTCAT ATGTACGCTAATTGTGGGTTCATCGCTGCTGCTGGTAGAATCTTTGGGCAAATGGGGTTT CGAGATGTTGTTTCATGGACTTCTATGGTGGCTGGGTATTGTAAATGCGGGATGGTTGAG AATGCACGAGAGATGTTCGATGAAATGCCTCACAGAAATTTGTTTACTTGGAGTATTATG ATTAATGGGTATGCGAAGAACAACTGTTTTGAGAAAGCCATTGACTTGTTTGAATTCATG AAAAGGGAAGGAGTTGTCGCGAATGAGACGGTTATGGTGAGTGTGATTTCGTCTTGTGCT CATTTGGGTGCACTTGAGTTTGGAGAAAGAGCATATGAGTATGTGGTTAAGAGTCACATG ACTGTGAATCTTATTCTTGGGACAGCTCTTGTGGATATGTTTTGGAGGTGTGGGGATATC GAGAAAGCAATTCATGTATTTGAGGGATTGCCTGAGACGGATAGCTTGAGCTGGAGTTCA ATAATCAAAGGTCTTGCAGTGCATGGGCATGCTCACAAGGCAATGCATTACTTCTCCCAA ATGATTAGTTTAGGGTTTATTCCAAGGGATGTTACATTCACAGCGGTTCTTTCAGCTTGC AGCCACGGTGGATTAGTTGAAAAAGGGTTAGAGATATATGAGAACATGAAAAAGGATCAT GGGATCGAGCCTAGACTCGAGCATTATGGTTGCATTGTTGATATGCTTGGTCGTGCTGGG AAATTAGCCGAAGCGGAGAACTTTATCCTTAAAATGCATGTGAAGCCAAACGCTCCTATA TTGGGAGCATTGCTTGGAGCATGTAAGATTTATAAGAACACCGAGGTTGCAGAGAGAGTA GGAAACATGTTGATAAAGGTGAAACCAGAACATAGCGGTTACTATGTCTTACTGTCAAAT ATATACGCGTGTGCAGGACAATGGGATAAGATAGAGAGCTTGAGAGACATGATGAAGGAG AAGCTTGTTAAGAAACCACCAGGGTGGAGCTTAATAGAGATTGATGGGAAAATAAACAAG TTCACAATGGGAGATGATCAGAAGCATCCTGAAATGGGTAAGATCAGAAGGAAGTGGGAA GAGATCTTGGGGAAGATAAGATTGATAGGGTATAAAGGGAACACAGGTGATGCGTTTTTC GATGTAGACGAGGAGGAGAAGGAGAGTTCGATTCATATGCATAGTGAGAAACTTGCAATT GCATATGGTATGATGAAGACTAAGCCTGGTACAACCATTAGGATAGTGAAGAACTTGAGG GTATGTGAAGATTGTCATACAGTAACAAAGCTTATCTCTGAGGTTTATGGTAGAGAGTTA ATTGTAAGAGACCGCAACAGATTTCATCATTTTAGAAATGGAGTATGTTCCTGCAGAGAT TATTGGTGA

Peptide Sequence

PEP ID	AT5G06540.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:1999181-2001049 REVERSE LENGTH=622 \| 201606
Sequence	MSNIVLNTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTF NKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITF PFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGF RDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFM KREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI EKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSAC SHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPI LGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKE KLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFF DVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGREL IVRDRNRFHHFRNGVCSCRDYW

Transcript Sequence

Transcript ID	AT5G06540.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:1999077-2001049 REVERSE LENGTH=1973 \| 201606
Sequence	ATGAGTAACATTGTGCTCAACACACTTCGATTCAAACACCCGAAGCTTGCCTTGCTCCAA TCCTGCTCTTCCTTTTCCGACCTCAAGATCATACATGGCTTTCTCTTACGAACCCATCTC ATCTCCGACGTCTTCGTTGCCAGTCGTCTCCTCGCTCTCTGCGTTGACGACTCCACCTTC AACAAACCAACCAATCTCTTGGGATATGCATACGGAATCTTCTCTCAGATTCAAAACCCT AATCTTTTCGTCTTCAATCTACTCATTCGCTGCTTCTCCACTGGTGCAGAGCCTAGTAAG GCTTTTGGGTTCTATACCCAGATGTTGAAATCTCGGATTTGGCCAGATAACATCACGTTT CCGTTTCTGATTAAGGCGTCTAGTGAGATGGAGTGTGTTCTAGTGGGAGAGCAAACGCAT TCACAGATTGTTAGATTCGGATTTCAGAATGATGTTTATGTAGAGAATTCGCTTGTTCAT ATGTACGCTAATTGTGGGTTCATCGCTGCTGCTGGTAGAATCTTTGGGCAAATGGGGTTT CGAGATGTTGTTTCATGGACTTCTATGGTGGCTGGGTATTGTAAATGCGGGATGGTTGAG AATGCACGAGAGATGTTCGATGAAATGCCTCACAGAAATTTGTTTACTTGGAGTATTATG ATTAATGGGTATGCGAAGAACAACTGTTTTGAGAAAGCCATTGACTTGTTTGAATTCATG AAAAGGGAAGGAGTTGTCGCGAATGAGACGGTTATGGTGAGTGTGATTTCGTCTTGTGCT CATTTGGGTGCACTTGAGTTTGGAGAAAGAGCATATGAGTATGTGGTTAAGAGTCACATG ACTGTGAATCTTATTCTTGGGACAGCTCTTGTGGATATGTTTTGGAGGTGTGGGGATATC GAGAAAGCAATTCATGTATTTGAGGGATTGCCTGAGACGGATAGCTTGAGCTGGAGTTCA ATAATCAAAGGTCTTGCAGTGCATGGGCATGCTCACAAGGCAATGCATTACTTCTCCCAA ATGATTAGTTTAGGGTTTATTCCAAGGGATGTTACATTCACAGCGGTTCTTTCAGCTTGC AGCCACGGTGGATTAGTTGAAAAAGGGTTAGAGATATATGAGAACATGAAAAAGGATCAT GGGATCGAGCCTAGACTCGAGCATTATGGTTGCATTGTTGATATGCTTGGTCGTGCTGGG AAATTAGCCGAAGCGGAGAACTTTATCCTTAAAATGCATGTGAAGCCAAACGCTCCTATA TTGGGAGCATTGCTTGGAGCATGTAAGATTTATAAGAACACCGAGGTTGCAGAGAGAGTA GGAAACATGTTGATAAAGGTGAAACCAGAACATAGCGGTTACTATGTCTTACTGTCAAAT ATATACGCGTGTGCAGGACAATGGGATAAGATAGAGAGCTTGAGAGACATGATGAAGGAG AAGCTTGTTAAGAAACCACCAGGGTGGAGCTTAATAGAGATTGATGGGAAAATAAACAAG TTCACAATGGGAGATGATCAGAAGCATCCTGAAATGGGTAAGATCAGAAGGAAGTGGGAA GAGATCTTGGGGAAGATAAGATTGATAGGGTATAAAGGGAACACAGGTGATGCGTTTTTC GATGTAGACGAGGAGGAGAAGGAGAGTTCGATTCATATGCATAGTGAGAAACTTGCAATT GCATATGGTATGATGAAGACTAAGCCTGGTACAACCATTAGGATAGTGAAGAACTTGAGG GTATGTGAAGATTGTCATACAGTAACAAAGCTTATCTCTGAGGTTTATGGTAGAGAGTTA ATTGTAAGAGACCGCAACAGATTTCATCATTTTAGAAATGGAGTATGTTCCTGCAGAGAT TATTGGTGACAGTCTCTGTTTTAGTATTTTTTGTAGAGGATTTGTGTTTTTATTTTAGAG CAGTGACAAGTTTACATAGTAAAATATGGTAAACTTCTTTTTGTTTTTGAGTA