Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G06400.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:1955959-1959051 FORWARD LENGTH=3093 \| 201606
Sequence	ATGAAAGCCTTGTTTCGATTCAAGTCTTGCTTGTTTGATCCAACACGAAGGAGGAACCAA CTCGTTTCTTTCTCAGGTTTCTCAAAGTCATCTAAATCTAATAAAACCCGTGAGACTACT ACCACATCGAAGATCCAAGCAGAAGCTACTGCAATCACTTCACTATTCAACGAGATTACT GAGATTTTAGGAACGGATGTTGTCAAACTAGATGAGACCACGCGGCTCAGATCCCATGTG TCAGGAGCTGTCTCTGATAATGGAGTATCGGTTTCTTGCACGGAAGGTGTTCGTCAAAAT GCTGCAATGGGATTTTCAGGTGAGGATGAAAAGGCTCAGAAAGTTCTTCATGAAGAAGTT GACTTCAGCCCCGTGGTTCATGAGATTACGAGTGTCGTCAGGGGAGATGATGTATTAGTT TCGATGGAGGACAGGTTAGAGAAACTGAGTTTTCGGTTTGAACCAGAAATAGTGGAGAAT GTACTCAAGAGGTGCTTCAAGGTTCCTCATTTGGCTATGAGGTTCTTTAATTGGGTTAAA CAAAAGGATGGGTTTTCGCATAGAGTTGGAATTTACAATACCATGCTTAGCATAGCTGGA GAAGCGAGAAATCTCGATATGGTAGATGAATTGGTGAGTGAAATGGAGAAGAATGGTTGT GATAAGGATATCAGGACATGGACCATTCTTATCTCAGTGTACGGGAAGGCAAAAAAGATT GGAAAAGGTCTGCTAGTTTTTGAGAAGATGAGGAAAAGTGGATTCGAACTCGATGCTACG GCTTACAATATCATGATTAGGTCTCTATGTATTGCTGGTAGAGGTGATCTTGCGCTTGAA TTCTATAAGGAAATGATGGAAAAAGGTATCACTTTTGGATTAAGAACGTACAAGATGTTA CTGGATTGCATAGCGAAATCAGAGAAAGTTGATGTAGTCCAGTCCATTGCAGATGACATG GTTAGGATATGTGAGATATCAGAACATGACGCTTTTGGTTATTTGCTCAAGAGTTTTTGT GTTTCCGGTAAGATAAAAGAAGCTCTGGAACTGATCCGCGAGCTTAAGAACAAGGAAATG TGCCTCGACGCTAAGTATTTTGAGATTTTGGTAAAAGGACTTTGTAGAGCCAATAGAATG GTAGATGCTCTAGAGATTGTTGATATAATGAAGAGAAGGAAACTGGATGACTCTAATGTC TATGGTATCATCATCAGTGGGTATCTCAGGCAAAACGATGTTTCAAAAGCACTTGAACAG TTTGAGGTTATTAAAAAATCAGGGCGTCCACCTAGAGTTTCTACATACACTGAGATTATG CAACACCTCTTCAAGTTGAAACAGTTTGAAAAGGGTTGCAACTTATTCAATGAGATGATA GAGAACGGGATTGAGCCTGACAGCGTTGCTATCACAGCCGTGGTTGCTGGTCATTTGGGC CAAAACCGAGTAGCAGAGGCATGGAAGGTGTTTAGCAGCATGGAGGAAAAAGGCATCAAA CCTACATGGAAATCGTATTCGATATTTGTGAAAGAGCTCTGTAGATCATCAAGATATGAT GAGATCATTAAGATATTTAATCAAATGCACGCCTCCAAGATAGTTATTAGAGATGATATC TTTTCTTGGGTTATCTCTAGTATGGAGAAAAATGGTGAAAAGGAGAAGATTCATCTTATC AAAGAAATCCAGAAAAGATCCAATTCCTATTGTGATGAACTAAACGGATCTGGCAAAGCA GAATTTAGTCAAGAAGAAGAGCTTGTTGATGACTATAATTGTCCACAACTAGTGCAGCAG TCAGCTCTTCCACCAGCTTTATCTGCTGTTGATAAAATGGATGTGCAAGAAATTTGTCGG GTGTTATCATCCTCCCGAGATTGGGAGAGAACACAAGAAGCTCTAGAAAAATCGACAGTC CAGTTCACACCAGAACTGGTAGTTGAGGTTCTACGTCATGCCAAGATACAAGGCAACGCT GTTTTACGTTTCTTTTCATGGGTGGGAAAGAGAAATGGCTATAAGCACAATTCAGAGGCA TACAACATGAGCATCAAAGTTGCAGGATGTGGGAAAGATTTTAAGCAGATGAGAAGTCTG TTTTACGAGATGAGAAGGCAAGGCTGCTTGATAACACAAGATACTTGGGCAATCATGATA ATGCAGTATGGTAGAACCGGTCTTACCAACATTGCTATTAGAACGTTCAAGGAAATGAAA GATATGGGTCTGATCCCGAGCTCTTCGACTTTCAAGTGTTTAATCACAGTTCTTTGTGAG AAGAAAGGCAGAAACGTTGAAGAAGCCACCAGAACATTCCGGGAGATGATTCGTTCAGGT TTTGTCCCAGATAGAGAACTAGTCCAAGACTACTTGGGATGCTTATGTGAAGTTGGTAAC ACGAAGGATGCAAAAAGTTGTTTGGATTCTCTCGGCAAGATAGGTTTCCCTGTCACTGTG GCCTACTCAATTTACATAAGAGCTCTTTGTCGAATTGGAAAGCTAGAAGAAGCTCTATCA GAATTAGCCAGTTTTGAAGGAGAGAGATCTTTACTAGACCAGTATACTTATGGAAGCATT GTTCATGGTTTATTACAGAGAGGAGACTTACAAAAAGCACTGGATAAAGTGAACTCCATG AAGGAAATTGGAACAAAACCTGGTGTCCATGTCTACACATCTCTGATTGTTTATTTCTTC AAGGAGAAACAGCTCGAGAAGGTTCTAGAGACATGTCAGAAAATGGAAGGAGAAAGCTGC GAACCTTCGGTTGTTACATATACGGCAATGATATGTGGATACATGAGCCTAGGAAAAGTG GAAGAGGCTTGGAATGCATTCCGCAATATGGAAGAGAGAGGAACTTCACCAGATTTTAAA ACATATAGTAAGTTCATAAACTGCTTGTGCCAAGCATGCAAATCAGAAGATGCCCTGAAG CTTCTGTCTGAGATGCTGGATAAGGGTATTGCTCCAAGCACTATCAATTTCCGAACAGTT TTCTACGGGTTAAACAGAGAAGGCAAGCATGATCTTGCCCGGATTGCTCTACAGAAGAAA TCGGCTTTAGTAGCACAGCGAACGGTATCTTAG

Peptide Sequence

PEP ID	AT5G06400.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:1955959-1959051 FORWARD LENGTH=1030 \| 201606
Sequence	MKALFRFKSCLFDPTRRRNQLVSFSGFSKSSKSNKTRETTTTSKIQAEATAITSLFNEIT EILGTDVVKLDETTRLRSHVSGAVSDNGVSVSCTEGVRQNAAMGFSGEDEKAQKVLHEEV DFSPVVHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVK QKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKI GKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKML LDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEM CLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQ FEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLG QNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDI FSWVISSMEKNGEKEKIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDDYNCPQLVQQ SALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNA VLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMI MQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSG FVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALS ELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFF KEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFK TYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQKK SALVAQRTVS

Transcript Sequence

Transcript ID	AT5G06400.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:1955861-1959250 FORWARD LENGTH=3390 \| 201606
Sequence	AAAATAAATAAAGGCTTTTTGAGTGGTTTTATAAACTACATAATTTACCTGTCTCGACCG TTATTTTCCCTCCCAAACTTCGGAGTTGACTTAGAGCAATGAAAGCCTTGTTTCGATTCA AGTCTTGCTTGTTTGATCCAACACGAAGGAGGAACCAACTCGTTTCTTTCTCAGGTTTCT CAAAGTCATCTAAATCTAATAAAACCCGTGAGACTACTACCACATCGAAGATCCAAGCAG AAGCTACTGCAATCACTTCACTATTCAACGAGATTACTGAGATTTTAGGAACGGATGTTG TCAAACTAGATGAGACCACGCGGCTCAGATCCCATGTGTCAGGAGCTGTCTCTGATAATG GAGTATCGGTTTCTTGCACGGAAGGTGTTCGTCAAAATGCTGCAATGGGATTTTCAGGTG AGGATGAAAAGGCTCAGAAAGTTCTTCATGAAGAAGTTGACTTCAGCCCCGTGGTTCATG AGATTACGAGTGTCGTCAGGGGAGATGATGTATTAGTTTCGATGGAGGACAGGTTAGAGA AACTGAGTTTTCGGTTTGAACCAGAAATAGTGGAGAATGTACTCAAGAGGTGCTTCAAGG TTCCTCATTTGGCTATGAGGTTCTTTAATTGGGTTAAACAAAAGGATGGGTTTTCGCATA GAGTTGGAATTTACAATACCATGCTTAGCATAGCTGGAGAAGCGAGAAATCTCGATATGG TAGATGAATTGGTGAGTGAAATGGAGAAGAATGGTTGTGATAAGGATATCAGGACATGGA CCATTCTTATCTCAGTGTACGGGAAGGCAAAAAAGATTGGAAAAGGTCTGCTAGTTTTTG AGAAGATGAGGAAAAGTGGATTCGAACTCGATGCTACGGCTTACAATATCATGATTAGGT CTCTATGTATTGCTGGTAGAGGTGATCTTGCGCTTGAATTCTATAAGGAAATGATGGAAA AAGGTATCACTTTTGGATTAAGAACGTACAAGATGTTACTGGATTGCATAGCGAAATCAG AGAAAGTTGATGTAGTCCAGTCCATTGCAGATGACATGGTTAGGATATGTGAGATATCAG AACATGACGCTTTTGGTTATTTGCTCAAGAGTTTTTGTGTTTCCGGTAAGATAAAAGAAG CTCTGGAACTGATCCGCGAGCTTAAGAACAAGGAAATGTGCCTCGACGCTAAGTATTTTG AGATTTTGGTAAAAGGACTTTGTAGAGCCAATAGAATGGTAGATGCTCTAGAGATTGTTG ATATAATGAAGAGAAGGAAACTGGATGACTCTAATGTCTATGGTATCATCATCAGTGGGT ATCTCAGGCAAAACGATGTTTCAAAAGCACTTGAACAGTTTGAGGTTATTAAAAAATCAG GGCGTCCACCTAGAGTTTCTACATACACTGAGATTATGCAACACCTCTTCAAGTTGAAAC AGTTTGAAAAGGGTTGCAACTTATTCAATGAGATGATAGAGAACGGGATTGAGCCTGACA GCGTTGCTATCACAGCCGTGGTTGCTGGTCATTTGGGCCAAAACCGAGTAGCAGAGGCAT GGAAGGTGTTTAGCAGCATGGAGGAAAAAGGCATCAAACCTACATGGAAATCGTATTCGA TATTTGTGAAAGAGCTCTGTAGATCATCAAGATATGATGAGATCATTAAGATATTTAATC AAATGCACGCCTCCAAGATAGTTATTAGAGATGATATCTTTTCTTGGGTTATCTCTAGTA TGGAGAAAAATGGTGAAAAGGAGAAGATTCATCTTATCAAAGAAATCCAGAAAAGATCCA ATTCCTATTGTGATGAACTAAACGGATCTGGCAAAGCAGAATTTAGTCAAGAAGAAGAGC TTGTTGATGACTATAATTGTCCACAACTAGTGCAGCAGTCAGCTCTTCCACCAGCTTTAT CTGCTGTTGATAAAATGGATGTGCAAGAAATTTGTCGGGTGTTATCATCCTCCCGAGATT GGGAGAGAACACAAGAAGCTCTAGAAAAATCGACAGTCCAGTTCACACCAGAACTGGTAG TTGAGGTTCTACGTCATGCCAAGATACAAGGCAACGCTGTTTTACGTTTCTTTTCATGGG TGGGAAAGAGAAATGGCTATAAGCACAATTCAGAGGCATACAACATGAGCATCAAAGTTG CAGGATGTGGGAAAGATTTTAAGCAGATGAGAAGTCTGTTTTACGAGATGAGAAGGCAAG GCTGCTTGATAACACAAGATACTTGGGCAATCATGATAATGCAGTATGGTAGAACCGGTC TTACCAACATTGCTATTAGAACGTTCAAGGAAATGAAAGATATGGGTCTGATCCCGAGCT CTTCGACTTTCAAGTGTTTAATCACAGTTCTTTGTGAGAAGAAAGGCAGAAACGTTGAAG AAGCCACCAGAACATTCCGGGAGATGATTCGTTCAGGTTTTGTCCCAGATAGAGAACTAG TCCAAGACTACTTGGGATGCTTATGTGAAGTTGGTAACACGAAGGATGCAAAAAGTTGTT TGGATTCTCTCGGCAAGATAGGTTTCCCTGTCACTGTGGCCTACTCAATTTACATAAGAG CTCTTTGTCGAATTGGAAAGCTAGAAGAAGCTCTATCAGAATTAGCCAGTTTTGAAGGAG AGAGATCTTTACTAGACCAGTATACTTATGGAAGCATTGTTCATGGTTTATTACAGAGAG GAGACTTACAAAAAGCACTGGATAAAGTGAACTCCATGAAGGAAATTGGAACAAAACCTG GTGTCCATGTCTACACATCTCTGATTGTTTATTTCTTCAAGGAGAAACAGCTCGAGAAGG TTCTAGAGACATGTCAGAAAATGGAAGGAGAAAGCTGCGAACCTTCGGTTGTTACATATA CGGCAATGATATGTGGATACATGAGCCTAGGAAAAGTGGAAGAGGCTTGGAATGCATTCC GCAATATGGAAGAGAGAGGAACTTCACCAGATTTTAAAACATATAGTAAGTTCATAAACT GCTTGTGCCAAGCATGCAAATCAGAAGATGCCCTGAAGCTTCTGTCTGAGATGCTGGATA AGGGTATTGCTCCAAGCACTATCAATTTCCGAACAGTTTTCTACGGGTTAAACAGAGAAG GCAAGCATGATCTTGCCCGGATTGCTCTACAGAAGAAATCGGCTTTAGTAGCACAGCGAA CGGTATCTTAGATACCGTATCTTAGATACCGTATCTGCATGACTATCACTGACATATCAC TGTAATTCTGTATCCATGGGAAGAAACTCATGCAAATTGATTCAAAGCAAATCTTTTTCT AAGCAACGAAATCTGTAAATGCTCTATTACAAAGTCCTCTTTCTGTCTGTTAACAATTCA AAAAGTAAGAGCTATATTTTAAGAAACGAG