Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G05530.1
CDS Infomation

| RING/U-box superfamily protein | Chr5:1635492-1636091 FORWARD LENGTH=600 | 201606
Sequence

ATGCAAAAGCAAAACAACCGGCGAGTCTTTTTCTACCCGGTCACTTTCTCACCGCGTTTC
CATTCAAATTCCGCTAGCCATTTTTCCATCACACTAGCGACTTTCCGACGAGACATCTAC
CGTCCGATCACCGGGAAAGAACGACTTTTCGGACAGACATCACTAGGTCGACCACTTCAA
CTCAAATTCGAGATCTCTTCAGAGTTTCTAGCAGCCTCCGACGTAGAAACATGTCTTCGA
CACGTGTCTCTTGTTTTGGCGGATGTTGAGCCAAGGATTCGGGAGATTCTGGTTTTGTAT
GGCATTCAACTCATCGGAGAAAGCAGAGGAAGAGCTTTCGAGCTCAAAGCTGAAGCAGAA
GATGTTGAATATCACTTGATGGAAGAAAGTAAAGGCTGGACTACTTGTATCCCGGCCAAA
TCGATTACTCCGGTCAACGAATGTACTATATGCCTTGAGGAATTATGCCACGACGAAGAA
TCTATAGAGACACATGATTGTTGTCATGTTTTTCATAAACTCTGTCTTTGGCGCTGGATT
CGGACCAAAAGCTCTTGTCCTCTTTGTCGTCATCCTATCTATTCAAGACCCAAGTTTTAG

Peptide Sequence

PEP ID

AT5G05530.1
PEP Infomation

| RING/U-box superfamily protein | Chr5:1635492-1636091 FORWARD LENGTH=199 | 201606
Sequence

MQKQNNRRVFFYPVTFSPRFHSNSASHFSITLATFRRDIYRPITGKERLFGQTSLGRPLQ
LKFEISSEFLAASDVETCLRHVSLVLADVEPRIREILVLYGIQLIGESRGRAFELKAEAE
DVEYHLMEESKGWTTCIPAKSITPVNECTICLEELCHDEESIETHDCCHVFHKLCLWRWI
RTKSSCPLCRHPIYSRPKF

Transcript Sequence

Transcript ID

AT5G05530.1
Transcript Infomation

| RING/U-box superfamily protein | Chr5:1635478-1636278 FORWARD LENGTH=801 | 201606
Sequence

GGGTGGACAAAGTCATGCAAAAGCAAAACAACCGGCGAGTCTTTTTCTACCCGGTCACTT
TCTCACCGCGTTTCCATTCAAATTCCGCTAGCCATTTTTCCATCACACTAGCGACTTTCC
GACGAGACATCTACCGTCCGATCACCGGGAAAGAACGACTTTTCGGACAGACATCACTAG
GTCGACCACTTCAACTCAAATTCGAGATCTCTTCAGAGTTTCTAGCAGCCTCCGACGTAG
AAACATGTCTTCGACACGTGTCTCTTGTTTTGGCGGATGTTGAGCCAAGGATTCGGGAGA
TTCTGGTTTTGTATGGCATTCAACTCATCGGAGAAAGCAGAGGAAGAGCTTTCGAGCTCA
AAGCTGAAGCAGAAGATGTTGAATATCACTTGATGGAAGAAAGTAAAGGCTGGACTACTT
GTATCCCGGCCAAATCGATTACTCCGGTCAACGAATGTACTATATGCCTTGAGGAATTAT
GCCACGACGAAGAATCTATAGAGACACATGATTGTTGTCATGTTTTTCATAAACTCTGTC
TTTGGCGCTGGATTCGGACCAAAAGCTCTTGTCCTCTTTGTCGTCATCCTATCTATTCAA
GACCCAAGTTTTAGGTTTTTTTTATAGCTTTTTTGGTATTCTTCTTTTGTGTAAAAATGT
CCAAAGATGCATATTCCACATTTCTACTTGCTGTATATAGCTTGCTTGTTCAACATCTCT
TGTGTAAAATTTAATAATTAAATAAATAAGTGAAAGCAACGAAAAGACATATAGACCTAG
TTATAAAAAAAGATGCCCAAG