Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G05460.1
CDS Infomation	\| Glycosyl hydrolase family 85 \| Chr5:1615615-1618771 FORWARD LENGTH=2043 \| 201606
Sequence	ATGTCAGTGGCACCACCAGCTCCAAGTCCTCCACCTTTCGATCCGACTAAGCCATCGACA CCAATCTCTTTCCCAATCAAAACTCTTCAAGACTTGAAGTCTCGCTCTTACTTCGATTCC TTTCATTATCCCTTTAACCGTTCCTCCGTACCTCTCCGTCGGAACATTGGCGCGTTGTCG GATCGACCTAGGCTCTTGGTTTGTCATGACATGAAAGGAGGCTACGTCGATGATAAGTGG GTACAAGGATGTGGAAACAACGCTGGTTACGCCATCTGGGATTGGTATTTGATGGACGTT TTCGTTTACTTCTCTCACTCTCTAGTGACTCTTCCTCCTCCTTGTTGGACCAACACTGCT CACAGACATGGCGTCAAAGTATTGGGGACTTTCATCACAGAATGGGACGAAGGAAAAGCT ACCTGCAAAGAGTTGTTGGCCACAAAGGAATCTGCGCAGATGTATGCAGAGCGTTTGGCT GAACTTGCTGCTGCTCTTGGCTTTGATGGCTGGCTGATAAATATAGAGAATGTAATAGAT GAAGTTCAAATTCCAAATTTGATGGTTTTTGTAAGCCATCTAACAAAAGTCATGCATTCA TCTGTACCTGGAGGTTTAGTTATATGGTATGATAGTGTCACTATTGATGGTCATCTTGCT TGGCAAGATCAGTTAACCGAGAATAATAAACCTTTCTTTGATATATGCGATGGTATATTC ATGAACTATACATGGAAGGAGAACTACCCCAAAGCATCAGCTGAAATTGCCGGTGATAGA AAATATGATGTCTACATGGGAATAGATGTGTTTGGTCGGGGAACTTACGGTGGTGGGCAA TGGACTGCAAATGTTGCTCTTGATTTGCTGAAGAGCAGTAATGTATCAGCTGCGATATTT GCTCCTGGATGGGTATACGAAACCGAGCAACCCCCGGATTTTTACACGGCACAAAACAAA TGGTGGTCACTTGTTGAGAAGTCATGGGGTATAGTTCAAACATATCCTCAAGTCCTACCT TTCTACTCAGATTTTAATCAGGGCCTTGGTTCTCATACCTCTCTTGGAGGTCGGAAATTA TCAGAAGCTCCCTGGTACAACATCTCATGCCAAAGTCTACAGCCATTCCTAGAATTCAAT GAAGGAAGGAATTCAGAGACCATTCAGGTCACTGTTGATGGTCGAGAAGCATCTTATAAT GGAGGAGGGAACGTCAGTTTCAGAGGAAAACTAAAGAGAAATGCACATTTCACAGCAAGA CTATTCAAACCTCAGCTTCAGCTCTCTGCTGCCCCAATCTCAATCTTCTTTTCTGTGAAG TCAGATAAAAGATCCGAGCTAAGCATTCTGCTCCATTTTTCATCTCCTTCACAAGAGAAA AAGTCCATGCTTATGGTGCCAAATGAATCTATCAACAGATTTGGCGACATGTTCCTGCCA TGTCTTCTCACATCAAAACAGACCACATCCGGTTGGACAGTACACGAAACAAACCTTGTT TTAGATGGGCACACACTGACTGAGATATCTGCCTTCTGCTCCAGACCAGATGATCTCACA GAAGAAACAAACACACTAGAGTATTTTGCATTGCTTGGACATATCTCCATCAAGAGCCAG CAAAAAGCCAAGGTTTATCCTCTGGCGTCATCATGGGTTATAGAGGCTCATCACGTAAAG TTTGTACCGGGTGATTCTGGCTCCAAGACCTTAAGTTGTAAGCTAGAATGGAGATTGAAG CACCCTGAAGAAGATTCTGTCTTTCCAAAGTACAATGTATATGCAGAGAATCTGAGTTCG AGTGAGTATAGACCAAGGAAGGTTATGGAAGAACCAAGAAGCGAGAAAGTGTTTCTTGGA ACAGCTCATGTTGATGCTTATTATGTCTCTGAAATGGTCGTTGGATCAGATGTGAAGGGA GTCCGGTTCGTGGTTCAAACCTGTGGTGAAGATGGTTCATGGCAGGAGTTGGATGCTTCC CCTAACCTTGTGGTTGAAGTAGAGCGTGTGAGTTCAAAGCTTTGTTGTTGTGGGTTGATT TGA

Peptide Sequence

PEP ID	AT5G05460.1
PEP Infomation	\| Glycosyl hydrolase family 85 \| Chr5:1615615-1618771 FORWARD LENGTH=680 \| 201606
Sequence	MSVAPPAPSPPPFDPTKPSTPISFPIKTLQDLKSRSYFDSFHYPFNRSSVPLRRNIGALS DRPRLLVCHDMKGGYVDDKWVQGCGNNAGYAIWDWYLMDVFVYFSHSLVTLPPPCWTNTA HRHGVKVLGTFITEWDEGKATCKELLATKESAQMYAERLAELAAALGFDGWLINIENVID EVQIPNLMVFVSHLTKVMHSSVPGGLVIWYDSVTIDGHLAWQDQLTENNKPFFDICDGIF MNYTWKENYPKASAEIAGDRKYDVYMGIDVFGRGTYGGGQWTANVALDLLKSSNVSAAIF APGWVYETEQPPDFYTAQNKWWSLVEKSWGIVQTYPQVLPFYSDFNQGLGSHTSLGGRKL SEAPWYNISCQSLQPFLEFNEGRNSETIQVTVDGREASYNGGGNVSFRGKLKRNAHFTAR LFKPQLQLSAAPISIFFSVKSDKRSELSILLHFSSPSQEKKSMLMVPNESINRFGDMFLP CLLTSKQTTSGWTVHETNLVLDGHTLTEISAFCSRPDDLTEETNTLEYFALLGHISIKSQ QKAKVYPLASSWVIEAHHVKFVPGDSGSKTLSCKLEWRLKHPEEDSVFPKYNVYAENLSS SEYRPRKVMEEPRSEKVFLGTAHVDAYYVSEMVVGSDVKGVRFVVQTCGEDGSWQELDAS PNLVVEVERVSSKLCCCGLI

Transcript Sequence

Transcript ID	AT5G05460.1
Transcript Infomation	\| Glycosyl hydrolase family 85 \| Chr5:1615507-1619107 FORWARD LENGTH=2487 \| 201606
Sequence	ACACAACAAAAATAAAAACAAAAATCTCTCTGTATCATCGTCTTCTTCGTCTTTTGCCGT TGACTTGTTTGAATTTTCGCAAATCCGTCTCTATCCAACGAAGAAGTCATGTCAGTGGCA CCACCAGCTCCAAGTCCTCCACCTTTCGATCCGACTAAGCCATCGACACCAATCTCTTTC CCAATCAAAACTCTTCAAGACTTGAAGTCTCGCTCTTACTTCGATTCCTTTCATTATCCC TTTAACCGTTCCTCCGTACCTCTCCGTCGGAACATTGGCGCGTTGTCGGATCGACCTAGG CTCTTGGTTTGTCATGACATGAAAGGAGGCTACGTCGATGATAAGTGGGTACAAGGATGT GGAAACAACGCTGGTTACGCCATCTGGGATTGGTATTTGATGGACGTTTTCGTTTACTTC TCTCACTCTCTAGTGACTCTTCCTCCTCCTTGTTGGACCAACACTGCTCACAGACATGGC GTCAAAGTATTGGGGACTTTCATCACAGAATGGGACGAAGGAAAAGCTACCTGCAAAGAG TTGTTGGCCACAAAGGAATCTGCGCAGATGTATGCAGAGCGTTTGGCTGAACTTGCTGCT GCTCTTGGCTTTGATGGCTGGCTGATAAATATAGAGAATGTAATAGATGAAGTTCAAATT CCAAATTTGATGGTTTTTGTAAGCCATCTAACAAAAGTCATGCATTCATCTGTACCTGGA GGTTTAGTTATATGGTATGATAGTGTCACTATTGATGGTCATCTTGCTTGGCAAGATCAG TTAACCGAGAATAATAAACCTTTCTTTGATATATGCGATGGTATATTCATGAACTATACA TGGAAGGAGAACTACCCCAAAGCATCAGCTGAAATTGCCGGTGATAGAAAATATGATGTC TACATGGGAATAGATGTGTTTGGTCGGGGAACTTACGGTGGTGGGCAATGGACTGCAAAT GTTGCTCTTGATTTGCTGAAGAGCAGTAATGTATCAGCTGCGATATTTGCTCCTGGATGG GTATACGAAACCGAGCAACCCCCGGATTTTTACACGGCACAAAACAAATGGTGGTCACTT GTTGAGAAGTCATGGGGTATAGTTCAAACATATCCTCAAGTCCTACCTTTCTACTCAGAT TTTAATCAGGGCCTTGGTTCTCATACCTCTCTTGGAGGTCGGAAATTATCAGAAGCTCCC TGGTACAACATCTCATGCCAAAGTCTACAGCCATTCCTAGAATTCAATGAAGGAAGGAAT TCAGAGACCATTCAGGTCACTGTTGATGGTCGAGAAGCATCTTATAATGGAGGAGGGAAC GTCAGTTTCAGAGGAAAACTAAAGAGAAATGCACATTTCACAGCAAGACTATTCAAACCT CAGCTTCAGCTCTCTGCTGCCCCAATCTCAATCTTCTTTTCTGTGAAGTCAGATAAAAGA TCCGAGCTAAGCATTCTGCTCCATTTTTCATCTCCTTCACAAGAGAAAAAGTCCATGCTT ATGGTGCCAAATGAATCTATCAACAGATTTGGCGACATGTTCCTGCCATGTCTTCTCACA TCAAAACAGACCACATCCGGTTGGACAGTACACGAAACAAACCTTGTTTTAGATGGGCAC ACACTGACTGAGATATCTGCCTTCTGCTCCAGACCAGATGATCTCACAGAAGAAACAAAC ACACTAGAGTATTTTGCATTGCTTGGACATATCTCCATCAAGAGCCAGCAAAAAGCCAAG GTTTATCCTCTGGCGTCATCATGGGTTATAGAGGCTCATCACGTAAAGTTTGTACCGGGT GATTCTGGCTCCAAGACCTTAAGTTGTAAGCTAGAATGGAGATTGAAGCACCCTGAAGAA GATTCTGTCTTTCCAAAGTACAATGTATATGCAGAGAATCTGAGTTCGAGTGAGTATAGA CCAAGGAAGGTTATGGAAGAACCAAGAAGCGAGAAAGTGTTTCTTGGAACAGCTCATGTT GATGCTTATTATGTCTCTGAAATGGTCGTTGGATCAGATGTGAAGGGAGTCCGGTTCGTG GTTCAAACCTGTGGTGAAGATGGTTCATGGCAGGAGTTGGATGCTTCCCCTAACCTTGTG GTTGAAGTAGAGCGTGTGAGTTCAAAGCTTTGTTGTTGTGGGTTGATTTGAATTATGGTT CATTTCCGAACCTGCGATCTAATAAGACCATTGATGGTTTGTTTAGTCAGTTCAAGGATA TGAACCATACGATAATGAATTAATGATTATAAGGTTGATAATAATAACAAACCTTTTCAT GCACAGATTCTTTGCCTTGTGGTATATGTTGGTCCTTATCTGAAAGATTCAAAGGACGAC GACTAGTCTCAGTTTCACTCTCAACTTGTTCATTCCACTAAAACCGACAAGTCAACACAA TGAACATAAAGAACAAACAAAAATACACATCCAATGGAGGAAGAAGAACAATTTACTGCT CCAAATGAAACATAACAAACGAGCTTA