Gene sequences

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SNP Detection
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Data List

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G04870.1
CDS Infomation	\| calcium dependent protein kinase 1 \| Chr5:1417015-1419877 REVERSE LENGTH=1833 \| 201606
Sequence	ATGGGTAATACTTGTGTTGGACCAAGCAGAAATGGCTTCTTGCAATCTGTTTCAGCTGCA ATGTGGCGGCCAAGAGATGGAGATGATTCGGCTTCCATGAGTAATGGAGATATTGCAAGT GAAGCTGTTTCGGGAGAGCTTCGATCTCGATTATCTGATGAAGTCCAGAATAAACCTCCT GAACAGGTCACAATGCCGAAGCCAGGGACTGACGTCGAGACCAAGGACAGAGAGATTCGA ACTGAAAGCAAGCCTGAAACGCTAGAGGAGATAAGCCTTGAGTCCAAACCAGAGACTAAG CAGGAGACCAAGTCAGAGACCAAGCCGGAGTCAAAACCTGATCCTCCAGCTAAACCTAAG AAGCCTAAACACATGAAGAGAGTGTCAAGTGCAGGGCTTAGGACTGAGTCAGTGTTGCAG AGGAAGACTGAAAACTTCAAGGAATTCTATTCCTTGGGAAGGAAACTCGGACAAGGGCAA TTTGGGACGACTTTTTTATGTGTCGAGAAGACTACGGGGAAGGAGTTTGCCTGCAAGTCG ATTGCTAAGAGGAAGCTATTGACTGATGAGGACGTTGAGGATGTGAGAAGAGAAATTCAG ATAATGCATCACTTGGCTGGTCACCCTAATGTCATCTCCATCAAAGGAGCTTATGAGGAT GTTGTGGCAGTGCACCTTGTAATGGAGTGTTGTGCAGGCGGCGAGCTTTTTGACAGGATC ATTCAACGCGGTCACTACACAGAGAGGAAAGCGGCTGAGCTCACTAGAACCATTGTTGGG GTTGTAGAGGCTTGCCATTCTCTTGGTGTTATGCATCGAGACCTCAAGCCCGAGAATTTT CTGTTTGTCAGTAAACACGAAGATTCCCTCTTGAAGACGATTGATTTTGGACTCTCCATG TTCTTTAAACCAGACGATGTTTTTACAGATGTTGTTGGTAGCCCATATTATGTTGCCCCA GAAGTTCTTCGAAAGCGTTATGGCCCTGAAGCTGATGTCTGGAGTGCTGGAGTGATTGTG TACATTTTATTAAGCGGAGTTCCTCCATTCTGGGCTGAAACCGAACAAGGTATTTTCGAA CAGGTCCTCCACGGTGATCTTGACTTTTCGTCCGATCCATGGCCAAGTATATCTGAAAGT GCAAAGGATTTAGTGAGGAAAATGCTTGTCAGGGATCCCAAGAAAAGGTTAACTGCCCAC CAAGTATTATGTCATCCATGGGTTCAAGTCGACGGTGTGGCTCCAGACAAGCCTTTGGAT TCTGCTGTTCTGAGCCGTATGAAGCAGTTTTCTGCAATGAACAAGTTCAAGAAAATGGCT CTTAGAGTCATTGCTGAGAGCTTATCTGAAGAAGAAATCGCCGGCTTGAAAGAAATGTTT AATATGATAGATGCGGACAAGAGTGGTCAGATAACTTTCGAAGAACTGAAAGCAGGACTA AAACGAGTAGGGGCGAATCTCAAAGAGTCTGAAATTCTCGACTTGATGCAAGCTGCTGAT GTGGACAACAGCGGAACAATAGATTACAAAGAGTTCATAGCTGCAACATTACATCTAAAC AAAATAGAGAGAGAGGACCATTTGTTTGCAGCCTTTACATACTTTGACAAAGATGGGAGC GGCTATATCACCCCAGACGAGCTTCAACAAGCTTGTGAGGAGTTTGGTGTTGAGGATGTC CGCATAGAAGAACTGATGCGCGATGTTGATCAAGACAATGACGGGCGAATAGACTACAAC GAGTTTGTGGCGATGATGCAGAAAGGAAGCATCACAGGAGGACCTGTGAAAATGGGTCTA GAGAAAAGCTTTAGCATTGCTCTTAAACTCTAG

Peptide Sequence

PEP ID	AT5G04870.1
PEP Infomation	\| calcium dependent protein kinase 1 \| Chr5:1417015-1419877 REVERSE LENGTH=610 \| 201606
Sequence	MGNTCVGPSRNGFLQSVSAAMWRPRDGDDSASMSNGDIASEAVSGELRSRLSDEVQNKPP EQVTMPKPGTDVETKDREIRTESKPETLEEISLESKPETKQETKSETKPESKPDPPAKPK KPKHMKRVSSAGLRTESVLQRKTENFKEFYSLGRKLGQGQFGTTFLCVEKTTGKEFACKS IAKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMECCAGGELFDRI IQRGHYTERKAAELTRTIVGVVEACHSLGVMHRDLKPENFLFVSKHEDSLLKTIDFGLSM FFKPDDVFTDVVGSPYYVAPEVLRKRYGPEADVWSAGVIVYILLSGVPPFWAETEQGIFE QVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPKKRLTAHQVLCHPWVQVDGVAPDKPLD SAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGL KRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGS GYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGSITGGPVKMGL EKSFSIALKL

Transcript Sequence

Transcript ID	AT5G04870.1
Transcript Infomation	\| calcium dependent protein kinase 1 \| Chr5:1416564-1420554 REVERSE LENGTH=2961 \| 201606
Sequence	GATTGAAGAGGGTGGTGGACTTTGTAATCAAAGATTAATTAAAAAGAGAGTTAAGACAAA TCTCAGCGGAAAACTCGGCGGTGATAGATAATCAAAACAAAAGAAACGCGTTTTTCAAAC TGGTTCAATCTTCTTCTTCGTCTTTCTTCATCGTCTTCTTCTCTATACAGACCTTGACTC TCTCATTAAATTAACAAATGTCCCTACGGTTTATGCAAGTGTAGTGCTATTAAACTATCC CTTTTATTTTCCCACCCAACTCAATTTATTTTCTCATTCTTTCTCTTTACTCTTCTTCAG ATCTCTCTGTTTCTTTCTTTGTTGTTGTTATCTGGGGATGCTTTCTACTCTCTGTTTGGT TTCCTTCATTGTGACTTTCTATTTTCTGGGTTTGTTTCAAGTCATGATTTTTCCGATACC CTTTTGATTTTTCTTGCTATTTCTCACCTCTGTATAAGCAAGCTCTCTGCTGTTTCTCCT CATCCAAGTTGGGTTTATCAGTTCAGCTGTGTAGAAATTCAATCGTCTGAGAAGTCCGAG GTTTGATGTCTGATGGTTTTAAGATCGAAAGGATTTGACTTTTATCAGATTAGTAATGAG ATTAGATTGTTTTTGAGGTTATTGTAATCAGATCTTGATGCTATTTCTGGTGAAAGAGAT TTAAGACAAGTTAGGGAATGGGTAATACTTGTGTTGGACCAAGCAGAAATGGCTTCTTGC AATCTGTTTCAGCTGCAATGTGGCGGCCAAGAGATGGAGATGATTCGGCTTCCATGAGTA ATGGAGATATTGCAAGTGAAGCTGTTTCGGGAGAGCTTCGATCTCGATTATCTGATGAAG TCCAGAATAAACCTCCTGAACAGGTCACAATGCCGAAGCCAGGGACTGACGTCGAGACCA AGGACAGAGAGATTCGAACTGAAAGCAAGCCTGAAACGCTAGAGGAGATAAGCCTTGAGT CCAAACCAGAGACTAAGCAGGAGACCAAGTCAGAGACCAAGCCGGAGTCAAAACCTGATC CTCCAGCTAAACCTAAGAAGCCTAAACACATGAAGAGAGTGTCAAGTGCAGGGCTTAGGA CTGAGTCAGTGTTGCAGAGGAAGACTGAAAACTTCAAGGAATTCTATTCCTTGGGAAGGA AACTCGGACAAGGGCAATTTGGGACGACTTTTTTATGTGTCGAGAAGACTACGGGGAAGG AGTTTGCCTGCAAGTCGATTGCTAAGAGGAAGCTATTGACTGATGAGGACGTTGAGGATG TGAGAAGAGAAATTCAGATAATGCATCACTTGGCTGGTCACCCTAATGTCATCTCCATCA AAGGAGCTTATGAGGATGTTGTGGCAGTGCACCTTGTAATGGAGTGTTGTGCAGGCGGCG AGCTTTTTGACAGGATCATTCAACGCGGTCACTACACAGAGAGGAAAGCGGCTGAGCTCA CTAGAACCATTGTTGGGGTTGTAGAGGCTTGCCATTCTCTTGGTGTTATGCATCGAGACC TCAAGCCCGAGAATTTTCTGTTTGTCAGTAAACACGAAGATTCCCTCTTGAAGACGATTG ATTTTGGACTCTCCATGTTCTTTAAACCAGACGATGTTTTTACAGATGTTGTTGGTAGCC CATATTATGTTGCCCCAGAAGTTCTTCGAAAGCGTTATGGCCCTGAAGCTGATGTCTGGA GTGCTGGAGTGATTGTGTACATTTTATTAAGCGGAGTTCCTCCATTCTGGGCTGAAACCG AACAAGGTATTTTCGAACAGGTCCTCCACGGTGATCTTGACTTTTCGTCCGATCCATGGC CAAGTATATCTGAAAGTGCAAAGGATTTAGTGAGGAAAATGCTTGTCAGGGATCCCAAGA AAAGGTTAACTGCCCACCAAGTATTATGTCATCCATGGGTTCAAGTCGACGGTGTGGCTC CAGACAAGCCTTTGGATTCTGCTGTTCTGAGCCGTATGAAGCAGTTTTCTGCAATGAACA AGTTCAAGAAAATGGCTCTTAGAGTCATTGCTGAGAGCTTATCTGAAGAAGAAATCGCCG GCTTGAAAGAAATGTTTAATATGATAGATGCGGACAAGAGTGGTCAGATAACTTTCGAAG AACTGAAAGCAGGACTAAAACGAGTAGGGGCGAATCTCAAAGAGTCTGAAATTCTCGACT TGATGCAAGCTGCTGATGTGGACAACAGCGGAACAATAGATTACAAAGAGTTCATAGCTG CAACATTACATCTAAACAAAATAGAGAGAGAGGACCATTTGTTTGCAGCCTTTACATACT TTGACAAAGATGGGAGCGGCTATATCACCCCAGACGAGCTTCAACAAGCTTGTGAGGAGT TTGGTGTTGAGGATGTCCGCATAGAAGAACTGATGCGCGATGTTGATCAAGACAATGACG GGCGAATAGACTACAACGAGTTTGTGGCGATGATGCAGAAAGGAAGCATCACAGGAGGAC CTGTGAAAATGGGTCTAGAGAAAAGCTTTAGCATTGCTCTTAAACTCTAGTTTCTCAGTC TATTTAAAAGTACAAAACTAAAGCCAAGAAGACAAAAGAGTTTTCTGATAATATATACCA TTTTGATTATGTTGAAGACATATGCACACAGCCAAGATTCTCTCTTGCCCTCTTTTGGAT TCTCTCAATCTTTTGGATGAGGTTTTGTCTTAGACTTGTTTTGGAAACTTTGTTGTATTG TGTTACTTCTTGAGCATATATAGTCTTCTAACATTACAAACCACGATTTCTTGTCTGTAA GTAAATTCAAAGAGTCAAAAAACTTGAACACGATTTGGAAATTTTGCGATAACGATCATC AAATTTTTGTGAGGGCTTTTTCTTGTAAAGCAAAAAGTTTGAGTATTTATGTGAAAATCG TTTAAAAGTTGAGGTACTTCTATGTAATTTCCCAGTTTTCTTTTTTTGAGAAATAAAATA ACTTAACCGAATTTCAATTAA