Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G04810.1
CDS Infomation	\| pentatricopeptide (PPR) repeat-containing protein \| Chr5:1390049-1393760 FORWARD LENGTH=2859 \| 201606
Sequence	ATGGATAATGGAGGGAGCGTGTTGTCGCTCTCTGCTCCACACTTCCCTTACTCCGCCACC ATTCTCCGACGTCACTCTCCGGTGGCTTCCATATCTTTCTCCCTTAAGCAACCACCACCG CAACCACCAGAACCTCCTGAGAGTCCTCCTGACCTCCGCCGCCCGGAGAAATCTATTGGT TCTTCTTCATCTTCTTCCTCTCCTTCCCCTATCCCTTCTCCTAAAACCCCTCTTAAGATT AATCCACTCAAGGGTTTAACCAATCGCTCTTCTGTGTCTCCTCTTGTTCAATCAGAGGTT TCGAGTAAAGTTTCTTCCTTTGGCTCCTCTCTAGCATCCAAGCTACGTTTGTCCAGCAAG CTCTCTCCTCCTCCTCCTCCTCCACCTCCGCCTCCTGTTGAGGAAACCACCCAATTCCGA GATGAGTTTCGGAGTGACACGAAACCACCGGAAGAAGAAACTCGAAACCCGCAACAGGAA TTCCGACAAGAAGGGAAGATATTCGTTGGTAATTTACCGACATGGATAAAGAAACCAGAG TTTGAAGAGTTCTTCCGACAGTTCGGACCGATAGAGAATGTGATTCTAATCAAAGGACAT CACGAGGTCGAGAAAAACGCGGGATTTGGGTTCATTATTTACGCGGCAGAGAAGTCTGCA ATGAAAGCTGTGGAGTTCGACGGCGTTGAGTTTCACGGCAGGATATTGACGGTGAAGCTA GACGACGGAAAGAGGCTGAAAACAAAGGCTGAACAGAGAGTGAGGTGGGTAGAGGAAGGA GAAGAAGACACGAAAATGTCTAATAAGTCGTCGTGGCATCAAGAGAGAGAAGGGTCTCGA AAGTCACTACAGAGGATTTTAGATACCAATGGAGATAACTGGCAAGCTGTTATTTCAGCT TTCGAGAAGATCAGCAAGCCTTCGAGGACAGAGTTTGGTTTGATGGTGAAGTTCTATGGA AGAAGAGGGGATATGCATCGTGCACGTGAGACTTTTGAGAGAATGCGCGCGAGGGGTATC ACACCAACATCACGTATATACACAAGCCTTATTCACGCTTATGCAGTTGGTAGAGACATG GACGAAGCACTGTCTTGTGTTCGTAAAATGAAGGAAGAAGGAATTGAGATGAGTTTGGTG ACTTATAGTGTAATCGTTGGAGGATTCTCTAAAGCGGGACATGCCGAAGCTGCAGATTAC TGGTTTGACGAGGCCAAACGGATACACAAAACCCTTAATGCCAGTATATATGGAAAAATC ATATATGCACACTGTCAGACGTGCAATATGGAGCGGGCAGAGGCATTGGTGAGGGAGATG GAAGAAGAAGGTATTGATGCTCCTATTGCTATCTACCACACCATGATGGATGGTTATACA ATGGTCGCTGATGAGAAGAAAGGCTTAGTTGTTTTCAAAAGACTTAAGGAATGTGGATTT ACTCCAACAGTTGTTACTTATGGGTGCCTCATTAATCTTTATACTAAGGTTGGAAAGATT TCAAAAGCCTTGGAAGTTAGTAGAGTGATGAAGGAAGAGGGCGTAAAGCATAATTTAAAG ACTTATTCGATGATGATTAACGGATTTGTAAAACTAAAAGATTGGGCCAATGCGTTTGCT GTATTTGAAGATATGGTAAAAGAAGGCATGAAACCAGATGTTATACTATACAACAACATC ATCTCAGCATTCTGCGGGATGGGTAACATGGATCGAGCGATCCAGACTGTTAAGGAGATG CAAAAGCTGAGGCATAGACCAACCACACGGACATTTATGCCTATCATACATGGATATGCG AAATCCGGAGACATGAGGAGATCACTAGAAGTTTTTGATATGATGAGACGATGTGGGTGT GTTCCAACCGTTCATACTTTCAATGGTTTGATTAATGGTTTAGTTGAGAAACGTCAGATG GAAAAGGCGGTTGAGATATTAGACGAGATGACATTGGCGGGTGTAAGTGCAAACGAACAT ACTTACACAAAGATCATGCAAGGCTATGCATCAGTCGGTGATACCGGAAAAGCCTTTGAG TATTTTACAAGGCTTCAAAACGAAGGTTTGGATGTTGACATTTTCACTTACGAGGCGTTA CTTAAAGCTTGCTGCAAATCAGGAAGAATGCAGAGCGCATTAGCTGTCACGAAAGAAATG AGTGCACGGAATATCCCGCGCAATTCCTTCGTCTATAACATATTAATCGACGGATGGGCA CGAAGAGGCGATGTATGGGAAGCCGCGGATTTGATACAGCAGATGAAAAAAGAAGGTGTT AAACCCGACATTCATACTTACACATCCTTCATTAGCGCTTGTTCTAAGGCCGGCGACATG AATAGAGCTACACAAACAATCGAAGAAATGGAAGCACTAGGTGTGAAACCTAACATCAAG ACATACACGACCTTAATAAAAGGATGGGCGAGAGCATCTCTTCCAGAGAAAGCCTTAAGT TGCTACGAGGAAATGAAGGCGATGGGGATAAAACCCGACAAAGCTGTGTATCATTGCCTT CTGACTTCGCTTCTGTCGCGTGCTTCAATCGCAGAAGCTTACATTTACTCAGGAGTGATG ACTATCTGCAAGGAAATGGTGGAGGCAGGCTTGATTGTTGATATGGGAACTGCGGTTCAC TGGTCTAAATGTCTGTGTAAGATTGAAGCTTCAGGTGGTGAGCTCACTGAGACGTTGCAG AAGACTTTCCCACCTGATTGGAGCTCGCATCATCATCACCATGGCTTCTTAGATCAAGTT TCTGATGTTGACTCCGATGAAGATGATGTTGATGGTGAAGATGGTGAGGACGATGAAGAT GTTAACTCTGTTTCGGATTTATTATCACCTTACAAGTAA

Peptide Sequence

PEP ID	AT5G04810.1
PEP Infomation	\| pentatricopeptide (PPR) repeat-containing protein \| Chr5:1390049-1393760 FORWARD LENGTH=952 \| 201606
Sequence	MDNGGSVLSLSAPHFPYSATILRRHSPVASISFSLKQPPPQPPEPPESPPDLRRPEKSIG SSSSSSSPSPIPSPKTPLKINPLKGLTNRSSVSPLVQSEVSSKVSSFGSSLASKLRLSSK LSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIFVGNLPTWIKKPE FEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYAAEKSAMKAVEFDGVEFHGRILTVKL DDGKRLKTKAEQRVRWVEEGEEDTKMSNKSSWHQEREGSRKSLQRILDTNGDNWQAVISA FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI IYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGF TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCL LTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTETLQ KTFPPDWSSHHHHHGFLDQVSDVDSDEDDVDGEDGEDDEDVNSVSDLLSPYK

Transcript Sequence

Transcript ID	AT5G04810.1
Transcript Infomation	\| pentatricopeptide (PPR) repeat-containing protein \| Chr5:1389979-1393997 FORWARD LENGTH=3166 \| 201606
Sequence	AAAAGTTATAAGGATTATGTTTCGTTATAACCAGAGAGAAGAGATACTAGAGAGAAGGGA AAGATAGAGAATGGATAATGGAGGGAGCGTGTTGTCGCTCTCTGCTCCACACTTCCCTTA CTCCGCCACCATTCTCCGACGTCACTCTCCGGTGGCTTCCATATCTTTCTCCCTTAAGCA ACCACCACCGCAACCACCAGAACCTCCTGAGAGTCCTCCTGACCTCCGCCGCCCGGAGAA ATCTATTGGTTCTTCTTCATCTTCTTCCTCTCCTTCCCCTATCCCTTCTCCTAAAACCCC TCTTAAGATTAATCCACTCAAGGGTTTAACCAATCGCTCTTCTGTGTCTCCTCTTGTTCA ATCAGAGGTTTCGAGTAAAGTTTCTTCCTTTGGCTCCTCTCTAGCATCCAAGCTACGTTT GTCCAGCAAGCTCTCTCCTCCTCCTCCTCCTCCACCTCCGCCTCCTGTTGAGGAAACCAC CCAATTCCGAGATGAGTTTCGGAGTGACACGAAACCACCGGAAGAAGAAACTCGAAACCC GCAACAGGAATTCCGACAAGAAGGGAAGATATTCGTTGGTAATTTACCGACATGGATAAA GAAACCAGAGTTTGAAGAGTTCTTCCGACAGTTCGGACCGATAGAGAATGTGATTCTAAT CAAAGGACATCACGAGGTCGAGAAAAACGCGGGATTTGGGTTCATTATTTACGCGGCAGA GAAGTCTGCAATGAAAGCTGTGGAGTTCGACGGCGTTGAGTTTCACGGCAGGATATTGAC GGTGAAGCTAGACGACGGAAAGAGGCTGAAAACAAAGGCTGAACAGAGAGTGAGGTGGGT AGAGGAAGGAGAAGAAGACACGAAAATGTCTAATAAGTCGTCGTGGCATCAAGAGAGAGA AGGGTCTCGAAAGTCACTACAGAGGATTTTAGATACCAATGGAGATAACTGGCAAGCTGT TATTTCAGCTTTCGAGAAGATCAGCAAGCCTTCGAGGACAGAGTTTGGTTTGATGGTGAA GTTCTATGGAAGAAGAGGGGATATGCATCGTGCACGTGAGACTTTTGAGAGAATGCGCGC GAGGGGTATCACACCAACATCACGTATATACACAAGCCTTATTCACGCTTATGCAGTTGG TAGAGACATGGACGAAGCACTGTCTTGTGTTCGTAAAATGAAGGAAGAAGGAATTGAGAT GAGTTTGGTGACTTATAGTGTAATCGTTGGAGGATTCTCTAAAGCGGGACATGCCGAAGC TGCAGATTACTGGTTTGACGAGGCCAAACGGATACACAAAACCCTTAATGCCAGTATATA TGGAAAAATCATATATGCACACTGTCAGACGTGCAATATGGAGCGGGCAGAGGCATTGGT GAGGGAGATGGAAGAAGAAGGTATTGATGCTCCTATTGCTATCTACCACACCATGATGGA TGGTTATACAATGGTCGCTGATGAGAAGAAAGGCTTAGTTGTTTTCAAAAGACTTAAGGA ATGTGGATTTACTCCAACAGTTGTTACTTATGGGTGCCTCATTAATCTTTATACTAAGGT TGGAAAGATTTCAAAAGCCTTGGAAGTTAGTAGAGTGATGAAGGAAGAGGGCGTAAAGCA TAATTTAAAGACTTATTCGATGATGATTAACGGATTTGTAAAACTAAAAGATTGGGCCAA TGCGTTTGCTGTATTTGAAGATATGGTAAAAGAAGGCATGAAACCAGATGTTATACTATA CAACAACATCATCTCAGCATTCTGCGGGATGGGTAACATGGATCGAGCGATCCAGACTGT TAAGGAGATGCAAAAGCTGAGGCATAGACCAACCACACGGACATTTATGCCTATCATACA TGGATATGCGAAATCCGGAGACATGAGGAGATCACTAGAAGTTTTTGATATGATGAGACG ATGTGGGTGTGTTCCAACCGTTCATACTTTCAATGGTTTGATTAATGGTTTAGTTGAGAA ACGTCAGATGGAAAAGGCGGTTGAGATATTAGACGAGATGACATTGGCGGGTGTAAGTGC AAACGAACATACTTACACAAAGATCATGCAAGGCTATGCATCAGTCGGTGATACCGGAAA AGCCTTTGAGTATTTTACAAGGCTTCAAAACGAAGGTTTGGATGTTGACATTTTCACTTA CGAGGCGTTACTTAAAGCTTGCTGCAAATCAGGAAGAATGCAGAGCGCATTAGCTGTCAC GAAAGAAATGAGTGCACGGAATATCCCGCGCAATTCCTTCGTCTATAACATATTAATCGA CGGATGGGCACGAAGAGGCGATGTATGGGAAGCCGCGGATTTGATACAGCAGATGAAAAA AGAAGGTGTTAAACCCGACATTCATACTTACACATCCTTCATTAGCGCTTGTTCTAAGGC CGGCGACATGAATAGAGCTACACAAACAATCGAAGAAATGGAAGCACTAGGTGTGAAACC TAACATCAAGACATACACGACCTTAATAAAAGGATGGGCGAGAGCATCTCTTCCAGAGAA AGCCTTAAGTTGCTACGAGGAAATGAAGGCGATGGGGATAAAACCCGACAAAGCTGTGTA TCATTGCCTTCTGACTTCGCTTCTGTCGCGTGCTTCAATCGCAGAAGCTTACATTTACTC AGGAGTGATGACTATCTGCAAGGAAATGGTGGAGGCAGGCTTGATTGTTGATATGGGAAC TGCGGTTCACTGGTCTAAATGTCTGTGTAAGATTGAAGCTTCAGGTGGTGAGCTCACTGA GACGTTGCAGAAGACTTTCCCACCTGATTGGAGCTCGCATCATCATCACCATGGCTTCTT AGATCAAGTTTCTGATGTTGACTCCGATGAAGATGATGTTGATGGTGAAGATGGTGAGGA CGATGAAGATGTTAACTCTGTTTCGGATTTATTATCACCTTACAAGTAAGAAAAAACTGA TATTGTAACAACTTAAGGAAAGAGCAATATCAGCATATTTTTGTAATTTTGTTTTCTTGT GTTTTACGTTTTTGCAAAATAAACCTTATTGAACGTACGATTTCTTCATAAAAGCGAAAA TAATAAAAAGGAACCTAATAATAAAAGACATTAGAAAATAAATCCAAGAATTGATGAAAG CAACTTTATAAACATTTTGATCCATCACTACATGTGGTTTTGCAGA