Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G04780.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:1384540-1386447 FORWARD LENGTH=1908 \| 201606
Sequence	ATGTTGTCTCCTTCGCTGCCAAGGATGAACATTCTTGGTTTCACGGTGAACTTCTTGATC CGATGCAAAGTCTTACCCAGAAGAAGCAATACGAGTTCTCTCTCCCGAAACATCTCCGTA CTCGCCAGTTATGATCAGGAGGAAGTATCACCGGGACGATATAGCAATGAGTTTTCGAAT CGTAACTTGGTGCACGAAATTTTACAGCTTTGTGCTAGAAACGGAGCTGTTATGGAAGCA AAAGCTTGCCATGGGAAGATTATTCGTATTGATTTGGAGGGAGATGTTACTCTGTTGAAT GTTCTTATTAATGCTTATTCCAAGTGTGGTTTTGTGGAGCTTGCCCGCCAAGTGTTTGAT GGAATGCTTGAGAGAAGCTTGGTTTCTTGGAACACCATGATTGGTTTGTATACACGGAAT AGAATGGAGTCAGAAGCATTGGATATTTTCTTGGAGATGCGAAACGAAGGGTTTAAGTTT AGTGAATTCACTATATCGAGTGTTCTTTCTGCTTGTGGGGTAAATTGTGATGCCTTGGAA TGCAAAAAATTGCATTGTTTGTCAGTGAAGACATGTATTGACTTGAACTTGTATGTTGGT ACTGCTTTGCTTGATCTTTACGCAAAATGTGGGATGATCAAGGATGCAGTGCAGGTTTTC GAGTCTATGCAGGACAAGAGTTCAGTTACATGGAGTTCTATGGTGGCAGGTTATGTTCAG AACAAGAATTATGAAGAGGCACTCCTTCTTTACCGTCGAGCTCAGAGAATGAGTTTAGAG CAGAATCAGTTCACATTATCTTCAGTAATTTGCGCTTGTTCAAATCTGGCAGCTTTAATA GAAGGGAAACAGATGCATGCTGTTATATGTAAGTCCGGGTTTGGTTCTAATGTCTTTGTG GCATCCTCTGCAGTAGATATGTATGCTAAATGTGGAAGCTTGAGAGAGTCTTATATTATT TTCTCGGAAGTGCAAGAGAAGAATCTTGAGCTTTGGAACACGATCATCTCGGGGTTTGCA AAGCATGCTCGTCCTAAGGAAGTGATGATCTTGTTTGAGAAAATGCAACAAGATGGAATG CACCCAAATGAGGTTACTTTTAGTTCCTTGTTATCGGTTTGTGGTCACACGGGTTTGGTC GAGGAAGGAAGGAGATTTTTCAAACTCATGAGAACCACTTACGGTCTGTCGCCTAATGTG GTTCATTACTCATGTATGGTTGATATTCTTGGTCGTGCTGGTCTATTGTCTGAAGCGTAC GAGTTGATAAAGTCTATTCCTTTCGATCCTACAGCTTCCATTTGGGGTTCTCTTCTAGCT TCTTGTCGAGTCTACAAAAATCTCGAGCTGGCAGAAGTTGCAGCCGAGAAACTATTCGAA TTAGAACCAGAAAACGCCGGTAATCACGTCTTACTATCCAATATATACGCGGCAAACAAA CAGTGGGAGGAAATCGCCAAGTCAAGGAAGCTTTTAAGGGACTGCGACGTGAAGAAAGTA AGAGGAAAAAGTTGGATTGACATTAAAGACAAGGTCCATACTTTCAGTGTTGGAGAGAGC GGTCATCCGAGAATCCGTGAGATCTGTTCGACGCTAGACAATCTAGTAATCAAATTCAGA AAGTTTGGATATAAACCAAGCGTAGAACACGAGCTGCACGATGTGGAGATAGGAAAGAAA GAGGAGCTTTTGATGCAGCATAGTGAGAAGCTGGCATTGGTTTTTGGGTTAATGTGTTTA CCAGAGAGTTCTCCAGTGAGGATTATGAAGAATCTGAGGATTTGTGTGGATTGCCATGAG TTCATGAAGGCTGCATCAATGGCTACAAGAAGATTTATCATTGTTAGAGATGTTAATAGG TTTCACCATTTCAGTGATGGTCATTGTTCTTGTGGCGATTTTTGGTGA

Peptide Sequence

PEP ID	AT5G04780.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:1384540-1386447 FORWARD LENGTH=635 \| 201606
Sequence	MLSPSLPRMNILGFTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSN RNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFD GMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALE CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQ NKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFV ASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGM HPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAY ELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANK QWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFR KFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHE FMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW

Transcript Sequence

Transcript ID	AT5G04780.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:1384471-1386447 FORWARD LENGTH=1977 \| 201606
Sequence	GAAAAAGCCCATCAATATTCGAATGTGATAGTACACTTTAGGCATTTAGGCCTTTGGCCC AAACTAAGTATGTTGTCTCCTTCGCTGCCAAGGATGAACATTCTTGGTTTCACGGTGAAC TTCTTGATCCGATGCAAAGTCTTACCCAGAAGAAGCAATACGAGTTCTCTCTCCCGAAAC ATCTCCGTACTCGCCAGTTATGATCAGGAGGAAGTATCACCGGGACGATATAGCAATGAG TTTTCGAATCGTAACTTGGTGCACGAAATTTTACAGCTTTGTGCTAGAAACGGAGCTGTT ATGGAAGCAAAAGCTTGCCATGGGAAGATTATTCGTATTGATTTGGAGGGAGATGTTACT CTGTTGAATGTTCTTATTAATGCTTATTCCAAGTGTGGTTTTGTGGAGCTTGCCCGCCAA GTGTTTGATGGAATGCTTGAGAGAAGCTTGGTTTCTTGGAACACCATGATTGGTTTGTAT ACACGGAATAGAATGGAGTCAGAAGCATTGGATATTTTCTTGGAGATGCGAAACGAAGGG TTTAAGTTTAGTGAATTCACTATATCGAGTGTTCTTTCTGCTTGTGGGGTAAATTGTGAT GCCTTGGAATGCAAAAAATTGCATTGTTTGTCAGTGAAGACATGTATTGACTTGAACTTG TATGTTGGTACTGCTTTGCTTGATCTTTACGCAAAATGTGGGATGATCAAGGATGCAGTG CAGGTTTTCGAGTCTATGCAGGACAAGAGTTCAGTTACATGGAGTTCTATGGTGGCAGGT TATGTTCAGAACAAGAATTATGAAGAGGCACTCCTTCTTTACCGTCGAGCTCAGAGAATG AGTTTAGAGCAGAATCAGTTCACATTATCTTCAGTAATTTGCGCTTGTTCAAATCTGGCA GCTTTAATAGAAGGGAAACAGATGCATGCTGTTATATGTAAGTCCGGGTTTGGTTCTAAT GTCTTTGTGGCATCCTCTGCAGTAGATATGTATGCTAAATGTGGAAGCTTGAGAGAGTCT TATATTATTTTCTCGGAAGTGCAAGAGAAGAATCTTGAGCTTTGGAACACGATCATCTCG GGGTTTGCAAAGCATGCTCGTCCTAAGGAAGTGATGATCTTGTTTGAGAAAATGCAACAA GATGGAATGCACCCAAATGAGGTTACTTTTAGTTCCTTGTTATCGGTTTGTGGTCACACG GGTTTGGTCGAGGAAGGAAGGAGATTTTTCAAACTCATGAGAACCACTTACGGTCTGTCG CCTAATGTGGTTCATTACTCATGTATGGTTGATATTCTTGGTCGTGCTGGTCTATTGTCT GAAGCGTACGAGTTGATAAAGTCTATTCCTTTCGATCCTACAGCTTCCATTTGGGGTTCT CTTCTAGCTTCTTGTCGAGTCTACAAAAATCTCGAGCTGGCAGAAGTTGCAGCCGAGAAA CTATTCGAATTAGAACCAGAAAACGCCGGTAATCACGTCTTACTATCCAATATATACGCG GCAAACAAACAGTGGGAGGAAATCGCCAAGTCAAGGAAGCTTTTAAGGGACTGCGACGTG AAGAAAGTAAGAGGAAAAAGTTGGATTGACATTAAAGACAAGGTCCATACTTTCAGTGTT GGAGAGAGCGGTCATCCGAGAATCCGTGAGATCTGTTCGACGCTAGACAATCTAGTAATC AAATTCAGAAAGTTTGGATATAAACCAAGCGTAGAACACGAGCTGCACGATGTGGAGATA GGAAAGAAAGAGGAGCTTTTGATGCAGCATAGTGAGAAGCTGGCATTGGTTTTTGGGTTA ATGTGTTTACCAGAGAGTTCTCCAGTGAGGATTATGAAGAATCTGAGGATTTGTGTGGAT TGCCATGAGTTCATGAAGGCTGCATCAATGGCTACAAGAAGATTTATCATTGTTAGAGAT GTTAATAGGTTTCACCATTTCAGTGATGGTCATTGTTCTTGTGGCGATTTTTGGTGA