Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G04540.1
CDS Infomation	\| Myotubularin-like phosphatases II superfamily \| Chr5:1296826-1302299 REVERSE LENGTH=2502 \| 201606
Sequence	ATGACGGCGCTGAGACCTCTCTCCGGGCGATCACGATCGCTGCGATGTTCGTCGGAGAAG ATGGAAGGTACCGGAAGCTGGGACGTGCTTGAATGGACTAAACTCGATTCAGCTTCATGG TCAGGCTCGTATTCGAATTTGGATTGCTTGCTGGAATCTGAGAGGATCATCTTCGAGGCT TGTGGAGTTATTCTCATTAACACCGATGAGGCAGGGACCCTCTTGTTATCAAATTTCCGT ATTCTGTTTTTGAGTGAAGGAACCAGAAAGCTTGTTCCACTTGGTACAATTCCATTTGTA GCTATCGAGAAGTTTAACAAACTGGCGCCGAAAGTTCAATCAAACAAATATCACAACAAT GAGAATGCACCGACACGACTTTTACAGGTCACTGGAAAAGATATGAGAATAGTTGTCTAT GGTTTTCGACCTGGTACCAAGCAGAGACATACTGTAGTTGATACGCTATTGAGGTGTAAC AAACCAGAGAGAGTATGGGATCTTTATGCTTTTACATGCGGACCTTCCCAATTCGGTAAC ACAAACCCAAAGGAAAGATTGCTTAATGAATATTTTCGCCTTCTCGGAAAAAGTTCACAA CGAGCGTCAATGAATATGATTGAAGACGGTTCATTCACTCTATCCAATGATCTTTGGCGT ATAACTAACTTAAACTCAAATTATGACTTGTGCCAGAGTTATCCGTTTGCTTTGATGGTT CCAAAATCCATTAGTGATGAAGAGCTGCTCCAGACTTCTACTTTCCGGGCAAGATGTCGC TTACCTGTGATCTCGTGGTGTCATCCAGGAAGTGGAGCTGTGATTGCTCGCTCATCACAA CCTTTAGTTGGTCTGATGATGAACATGAGGAGTAACTCTGATGAGAAACTTGTTGCTTCA TTCTGCACTCAATTAGCTGGTCATAAGGGAGCACGAAGGAAGCTTTATATCGTAGATGCA AGACCTAGGAAAAATGCATTAGCAAATGGAGCAAAGGGAGGAGGCTCAGAATCATCTTCA AATTATTTGCAATCTGAAATTGTTTTTTTGGGGATAGACAACATACATGCAATGAGAGAG AGCTTTTCCCGCCTTAGGGATTATTTAGATATGCATGGTACAACATCATCCGATGGGACG TCATCATTCTTGAGGCATGGTGGCTGGACGTGGGGTGGAGGTAATCTCAGTAGTATGTCT GCTTCAGTATCCGTGCTTGGAGATAGTGGTTGGTTGAGTCACATTCAGAGCATCTTAGCT GGTGTAGCATGGATTGCTGCACGTGTTGCTATGGAGTCAGCATCAGTTCTTGTGCACTGC AGTGATGGATGGGACAGAACAACTCAGCTGGTTTCTCTTGCATGCTTATTGCTTGATCCT TACTACAGAACATTTTCTGGGTTTCAGGCTCTTGTCGAAAAGGATTGGTTATCATTTGGT CACCCATTTTCGGATCGGGTGGGAATGCCAAACGTGTCTGAATCTGGTAATTTTGAATTA CCAATTCAGTCTTCTTCTGCTCGAAGTTTTCCTTCATCTCCAGTGCGGCAATCTCCAGGA TCAGCAGCTGCTCAATCCTCTAGCTCTTCATATGGGCTGAACAACTATTCTCCTATATTT TTGCAGTGGCTTGATTGCATTTCACAGCTAATGCGGATGTATCCTTCTGCTTTCGAGTTT TCTCCGACTTTTCTGGTAGATTTCATAGACTGCTTGCTTTCGTGTCGTTTTGGGAACTTT TTGTGCAATAGTGAAAAAGAGAGGCAGCAATGTGGGATTTCTGAAACCTGTGGATGCATT TGGGCCTACTTGGCTGATTTGCGTTCCTCCAGTGGAACTTCTCATGTCCACTGTAACCCA TTTTATGATCCTTCAAGATATGATGGCCCATTATTACCTCCTGCAGCAGCTCTAGCCCCA ACTCTCTGGCCCCAGTTCCATCTCCGGTGGGCCTGCCCTGTGGAGCCGAACGTCACAGAA ACCGAAGACCAATGTAGAGCCATGACTGTTAAGTATTCAGAAATGAAGAAGGAAAAAGAA GAAGCAGAGAGAAAGGTAGATGAGTTATCTTCTGCAATGGAGTCATTGAACGAAGAGTTA CTGAACGAGAGAGATATAAGCCGTGCAGCTAGAGAATCAGCAAAGAGGGCTACAAAAGAG CGTGCAGTCATATCACGAGCTGTGCAGTCACTCGGCTGCAAAGTTAAATTCACAAGAAAC GGAGATTGCACAGTTGAAGTAGAAGACGGGCCTCAGAAATGTTCACACTCAATTCCCCAA AAACAATCTGAGGACAACACCACAGATGTCTCAGAATCTATCTCATCGGTTACTGAACAA AATGTGTGTGAAGCAGTGTGTCCGTTGCGTACAAGAGAAGGAACGTGTAGATGGCCTGAT GCGGGTTGTGCTCGAATCGGGAACCAATTTCTCGGGTTGAAAACAAACTTTGAAGCGTTT GATAATCTATGCGTCTACGACAGCTATTTCACAGCTGAATGA

Peptide Sequence

PEP ID	AT5G04540.1
PEP Infomation	\| Myotubularin-like phosphatases II superfamily \| Chr5:1296826-1302299 REVERSE LENGTH=833 \| 201606
Sequence	MTALRPLSGRSRSLRCSSEKMEGTGSWDVLEWTKLDSASWSGSYSNLDCLLESERIIFEA CGVILINTDEAGTLLLSNFRILFLSEGTRKLVPLGTIPFVAIEKFNKLAPKVQSNKYHNN ENAPTRLLQVTGKDMRIVVYGFRPGTKQRHTVVDTLLRCNKPERVWDLYAFTCGPSQFGN TNPKERLLNEYFRLLGKSSQRASMNMIEDGSFTLSNDLWRITNLNSNYDLCQSYPFALMV PKSISDEELLQTSTFRARCRLPVISWCHPGSGAVIARSSQPLVGLMMNMRSNSDEKLVAS FCTQLAGHKGARRKLYIVDARPRKNALANGAKGGGSESSSNYLQSEIVFLGIDNIHAMRE SFSRLRDYLDMHGTTSSDGTSSFLRHGGWTWGGGNLSSMSASVSVLGDSGWLSHIQSILA GVAWIAARVAMESASVLVHCSDGWDRTTQLVSLACLLLDPYYRTFSGFQALVEKDWLSFG HPFSDRVGMPNVSESGNFELPIQSSSARSFPSSPVRQSPGSAAAQSSSSSYGLNNYSPIF LQWLDCISQLMRMYPSAFEFSPTFLVDFIDCLLSCRFGNFLCNSEKERQQCGISETCGCI WAYLADLRSSSGTSHVHCNPFYDPSRYDGPLLPPAAALAPTLWPQFHLRWACPVEPNVTE TEDQCRAMTVKYSEMKKEKEEAERKVDELSSAMESLNEELLNERDISRAARESAKRATKE RAVISRAVQSLGCKVKFTRNGDCTVEVEDGPQKCSHSIPQKQSEDNTTDVSESISSVTEQ NVCEAVCPLRTREGTCRWPDAGCARIGNQFLGLKTNFEAFDNLCVYDSYFTAE

Transcript Sequence

Transcript ID	AT5G04540.1
Transcript Infomation	\| Myotubularin-like phosphatases II superfamily \| Chr5:1296356-1302477 REVERSE LENGTH=3150 \| 201606
Sequence	GAAACGTAAACTTTGGCCGTACGGAAACAGCGTCGTATTTGGATGTCTCATTGTCTTTGT GGCAAAAAGGCAGCGTGCTAAATCCGTCCTTTGCCACCGTTGAGCGGCCGGTGAACCCCA AGCCGAATCACCGTCTCTCCCACCTCTCTCTCTCCCCTCTCTCTCTCTCCTTTTTTACAT GACGGCGCTGAGACCTCTCTCCGGGCGATCACGATCGCTGCGATGTTCGTCGGAGAAGAT GGAAGGTACCGGAAGCTGGGACGTGCTTGAATGGACTAAACTCGATTCAGCTTCATGGTC AGGCTCGTATTCGAATTTGGATTGCTTGCTGGAATCTGAGAGGATCATCTTCGAGGCTTG TGGAGTTATTCTCATTAACACCGATGAGGCAGGGACCCTCTTGTTATCAAATTTCCGTAT TCTGTTTTTGAGTGAAGGAACCAGAAAGCTTGTTCCACTTGGTACAATTCCATTTGTAGC TATCGAGAAGTTTAACAAACTGGCGCCGAAAGTTCAATCAAACAAATATCACAACAATGA GAATGCACCGACACGACTTTTACAGGTCACTGGAAAAGATATGAGAATAGTTGTCTATGG TTTTCGACCTGGTACCAAGCAGAGACATACTGTAGTTGATACGCTATTGAGGTGTAACAA ACCAGAGAGAGTATGGGATCTTTATGCTTTTACATGCGGACCTTCCCAATTCGGTAACAC AAACCCAAAGGAAAGATTGCTTAATGAATATTTTCGCCTTCTCGGAAAAAGTTCACAACG AGCGTCAATGAATATGATTGAAGACGGTTCATTCACTCTATCCAATGATCTTTGGCGTAT AACTAACTTAAACTCAAATTATGACTTGTGCCAGAGTTATCCGTTTGCTTTGATGGTTCC AAAATCCATTAGTGATGAAGAGCTGCTCCAGACTTCTACTTTCCGGGCAAGATGTCGCTT ACCTGTGATCTCGTGGTGTCATCCAGGAAGTGGAGCTGTGATTGCTCGCTCATCACAACC TTTAGTTGGTCTGATGATGAACATGAGGAGTAACTCTGATGAGAAACTTGTTGCTTCATT CTGCACTCAATTAGCTGGTCATAAGGGAGCACGAAGGAAGCTTTATATCGTAGATGCAAG ACCTAGGAAAAATGCATTAGCAAATGGAGCAAAGGGAGGAGGCTCAGAATCATCTTCAAA TTATTTGCAATCTGAAATTGTTTTTTTGGGGATAGACAACATACATGCAATGAGAGAGAG CTTTTCCCGCCTTAGGGATTATTTAGATATGCATGGTACAACATCATCCGATGGGACGTC ATCATTCTTGAGGCATGGTGGCTGGACGTGGGGTGGAGGTAATCTCAGTAGTATGTCTGC TTCAGTATCCGTGCTTGGAGATAGTGGTTGGTTGAGTCACATTCAGAGCATCTTAGCTGG TGTAGCATGGATTGCTGCACGTGTTGCTATGGAGTCAGCATCAGTTCTTGTGCACTGCAG TGATGGATGGGACAGAACAACTCAGCTGGTTTCTCTTGCATGCTTATTGCTTGATCCTTA CTACAGAACATTTTCTGGGTTTCAGGCTCTTGTCGAAAAGGATTGGTTATCATTTGGTCA CCCATTTTCGGATCGGGTGGGAATGCCAAACGTGTCTGAATCTGGTAATTTTGAATTACC AATTCAGTCTTCTTCTGCTCGAAGTTTTCCTTCATCTCCAGTGCGGCAATCTCCAGGATC AGCAGCTGCTCAATCCTCTAGCTCTTCATATGGGCTGAACAACTATTCTCCTATATTTTT GCAGTGGCTTGATTGCATTTCACAGCTAATGCGGATGTATCCTTCTGCTTTCGAGTTTTC TCCGACTTTTCTGGTAGATTTCATAGACTGCTTGCTTTCGTGTCGTTTTGGGAACTTTTT GTGCAATAGTGAAAAAGAGAGGCAGCAATGTGGGATTTCTGAAACCTGTGGATGCATTTG GGCCTACTTGGCTGATTTGCGTTCCTCCAGTGGAACTTCTCATGTCCACTGTAACCCATT TTATGATCCTTCAAGATATGATGGCCCATTATTACCTCCTGCAGCAGCTCTAGCCCCAAC TCTCTGGCCCCAGTTCCATCTCCGGTGGGCCTGCCCTGTGGAGCCGAACGTCACAGAAAC CGAAGACCAATGTAGAGCCATGACTGTTAAGTATTCAGAAATGAAGAAGGAAAAAGAAGA AGCAGAGAGAAAGGTAGATGAGTTATCTTCTGCAATGGAGTCATTGAACGAAGAGTTACT GAACGAGAGAGATATAAGCCGTGCAGCTAGAGAATCAGCAAAGAGGGCTACAAAAGAGCG TGCAGTCATATCACGAGCTGTGCAGTCACTCGGCTGCAAAGTTAAATTCACAAGAAACGG AGATTGCACAGTTGAAGTAGAAGACGGGCCTCAGAAATGTTCACACTCAATTCCCCAAAA ACAATCTGAGGACAACACCACAGATGTCTCAGAATCTATCTCATCGGTTACTGAACAAAA TGTGTGTGAAGCAGTGTGTCCGTTGCGTACAAGAGAAGGAACGTGTAGATGGCCTGATGC GGGTTGTGCTCGAATCGGGAACCAATTTCTCGGGTTGAAAACAAACTTTGAAGCGTTTGA TAATCTATGCGTCTACGACAGCTATTTCACAGCTGAATGAGAGACCAAGTTTTCACCAGA TTGACCAAAAATGAAGAACCTGTGTGTATTTTTTTTGACAGAGTAAGGCATAGCAAACAC CAATGAGGAACAGAATCATCAATAAAACCCCATAAAAAGGCGGTACAAAACCGCCAAACC AAGAGCGTTTTGGAAAGTGGGTGCGCTTCGGGAACTAACTTCTTGTATAGGCAATGCGAT CATGTATAGACTAGAGTCTGCTGCAGGTTGCTGGCTTCATTGAGAACGTTAGATTTGTTA TTTTATTTTTGTTGGTTGATGAAATGACTAAAGATTGAAAGTTATGTACAAATTTCTTAA CGAATTTGTTGTAACGAAAACTGATAATAGGATTATTGAGACGACAACAGCTATTATTAT CATCAGTTCCAAGAAACTCAAAAAAAGAAAAAACTTGGACGTGAGGAGTGTTAATTGATT GAAGTATTAAATATATGAATTATGAAGAGT