Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G04460.1
CDS Infomation	\| RING/U-box superfamily protein \| Chr5:1260009-1263695 FORWARD LENGTH=2592 \| 201606
Sequence	ATGACTAGTATTCAGCCTTTGCTACAAAAATCGGAGTCTAGAGATGATGTTCGTGCTGAG TTTGAGAGAGGTTTGGAGGAATTCATGCGTGGGCACTTGGACGAGTGTATCTCATTTGGG TCTTGTAGTTCTGTTCACAACCCTGAGGATGAGGATAATGAGGATGATCAGCTTGTGAGG AGGAGACGAAGGTCTGAACTTGAAGGGGATAATTTGGCTGAATCATCTGCTGCAAGAAGA CGCCAATCTCAAATTTTGAGCCGTTGGGCTGCTAGGCAGGCTCAGGAGATGATTACTACG ATTGAGAGGAGGAATCGAGAGTCTGAGTTGATTGCGTTGGCTGGTTTGCAAACGGTCTCT ATGCTTGATTCTTCTTTTCTTAGGGAGTCTCAGTCTCAGTCTCCGTCTTCAAGGCGTCAG GGTGCTGCTAGTGAGAGGCCTAACACTCAGGCATCTGGGATTTTGCAGATGTGGAGGGAA TTGGAAGATGAGCATGTGCTTAACAGGGCACGTGAAAGGGTGAGGGAAAGATTGAGGCAG CAAAGAAGTGTTGAGTCTAATACTAATTTATCTAGCTCTATTGCTTCGGAGAGTCAGCTG AGTGAAAATAATGGGAGTCTGAGAGACTCAAGTGAGAGTGAGAATGATTTCGGGTCTTGG TCACATGATCGGAATGAGCATGGGGATAATAATAATACTTCCAGTAGGGAACAATCTCCT GATCTTGGTGATGGCGAGAGGGAGAGGGTGAGGCATATTGCTCGTGGATGGATGGATAGT AGGATCAATGATCATTCATCTAATGTAAGGCAGAGAGACGATAACCGTAGACCGGAGTGG CTGGGTGATACTGAACGAGAAAGAGTCAGGATTATAAGAGAGTGGATGCAAATGACAAGT CAGCAGAGAGGAGGAGCTCGTGCAACACCGAGAGAAGATCAGAGGTCTACTTCAGAAGCT GATAGGAATCATGACGCTGCACCACAAGTTGACAGGGTCCGTGTAGGGTTAGCTGTTAAC CATGAAGAAGGACAACCACCTCATGTTCGTCGAGACTTGCGGAGAGTTAGAGGTAGGCAG GCGTTACTTGATTTGCTTATGAGGGCTGAAAGGGAGAGACAACGAGAACTTCAGGGCTTG TTGGAGCATCGTGCAGTGTCTGATTTTGCTCACCGCAATCGAATTCAGTCGCTTCTTAGA GGAAGATTCTTGCGGAACGAGCGACCTACAGTTCCAGAGAGAACTCCATCAATGGCTTCA AGGGAACTGCTTCAGCTAAGAGAAAGACAAACTGTCTCTGGCTTAAGGGAAGGGTTCCAT AACGGGAGGGAAAATATTGTCCATGAAAATACTAGCAACACTGATAATGATAATAGCAAT ACTTCCACAAATGCTCTTGCAATTGCAATCACTGCTGGGAATTCTCAGCGTGTAACCGAT GAGAGTTCAACTTCTTCCAGACAAGGGAATGATAGTCCCATTTTGCCTGATAACTCAGAA AGCAACCTAGCAAATGCGGATAGAGACTGGGAAGAGGATACCAATCAAAGAAGGATCTGG CAGGAAAATGTCCCAGTAGATGAGAGGCCAAATTTGGAGCAAACAACTCTAACGCAATTT GATGGGTATGATAACACAGATATAAATCGTGATGAAACCTCTGTCAGTGACATGCACCGA GAAGCTAGTGGATTTGCAGATGATGAATATCGCACACAAGAAGCTCATGGTGTTTGGCAT GAGAATAGCTCTAGACAATCCGATGGGAACTGGCCTGGGACACGGTCAGAAGCCCTAAGG AGTCGCCGTGTAGTACAGTTGAGAAGATTAAATAGGTTCCATCCACCTGAGGATGACAAT GTTTACAGCATGGAACTCAGGGAGCTCCTAAGCAGGAGAAGTGTTTCTAATCTACTACAT AGTGGTTTCCGTGAAAGTCTTGATCAACTGATACAGTCATATGCTGAAAGGAGAGGACAC ACTCACGTAGACTGGGATCTGCACGCTAACCTGCAAACAGCAATCCCAGATTCTCCAGAA CGTGACACAGACCACCAAGTATTTGTGCGGAACGATAACCAACTTAATGGCATCAATGGT TCACAACTGCTTCCCACTCCACCCGCGCCTCCACCCCAGCCAATATGGCATCAAGATTTG CACCACACTAGCTGGTCTCGTCACTCTATGCATCGGTCTGAAATTGAATGGGAGGTAATG AACGACCTAAGAGGAGACGTGGCAAGACTGCAGCAAGGAATGAGCCAGATGCAGAGGATG CTTGAAGCCTGCATGGATATGCAGTTAGAGCTGCAGCGTTCGGTTAGACAAGAGGTCTCT GCAGCCCTAAACCGATCTGCAGGTGACCAAGGTATGAGTGCGGAAACATCAGAGGATGGT TCAAGATGGAGCCATGTAAGCAAAGGAACTTGTTGCGTTTGTTGTGACAACCACATTGAT GCTCTCTTGTATAGATGCGGACACATGTGTACTTGCTCAAAATGTGCAAATGAGCTTGTA AGAAACGGAGGAAAATGTCCGCTTTGTAGAGCACCGATCATCGAGGTAATCCGAGCCTAC TCCATTTTATAA

Peptide Sequence

PEP ID	AT5G04460.1
PEP Infomation	\| RING/U-box superfamily protein \| Chr5:1260009-1263695 FORWARD LENGTH=863 \| 201606
Sequence	MTSIQPLLQKSESRDDVRAEFERGLEEFMRGHLDECISFGSCSSVHNPEDEDNEDDQLVR RRRRSELEGDNLAESSAARRRQSQILSRWAARQAQEMITTIERRNRESELIALAGLQTVS MLDSSFLRESQSQSPSSRRQGAASERPNTQASGILQMWRELEDEHVLNRARERVRERLRQ QRSVESNTNLSSSIASESQLSENNGSLRDSSESENDFGSWSHDRNEHGDNNNTSSREQSP DLGDGERERVRHIARGWMDSRINDHSSNVRQRDDNRRPEWLGDTERERVRIIREWMQMTS QQRGGARATPREDQRSTSEADRNHDAAPQVDRVRVGLAVNHEEGQPPHVRRDLRRVRGRQ ALLDLLMRAERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERPTVPERTPSMAS RELLQLRERQTVSGLREGFHNGRENIVHENTSNTDNDNSNTSTNALAIAITAGNSQRVTD ESSTSSRQGNDSPILPDNSESNLANADRDWEEDTNQRRIWQENVPVDERPNLEQTTLTQF DGYDNTDINRDETSVSDMHREASGFADDEYRTQEAHGVWHENSSRQSDGNWPGTRSEALR SRRVVQLRRLNRFHPPEDDNVYSMELRELLSRRSVSNLLHSGFRESLDQLIQSYAERRGH THVDWDLHANLQTAIPDSPERDTDHQVFVRNDNQLNGINGSQLLPTPPAPPPQPIWHQDL HHTSWSRHSMHRSEIEWEVMNDLRGDVARLQQGMSQMQRMLEACMDMQLELQRSVRQEVS AALNRSAGDQGMSAETSEDGSRWSHVSKGTCCVCCDNHIDALLYRCGHMCTCSKCANELV RNGGKCPLCRAPIIEVIRAYSIL

Transcript Sequence

Transcript ID	AT5G04460.1
Transcript Infomation	\| RING/U-box superfamily protein \| Chr5:1259435-1263937 FORWARD LENGTH=3331 \| 201606
Sequence	TAAAATAAATAAATTAATTAATTACGAGAAAAAGACAATTAAAGAGTGATTAATTAATTC TCTAATCTCTCTCTCTCTCTGTCTAATGGCCATTGCACCTTCTCTCTTTGAAAAAAATCC AATCTTTTTCTACTTTCATTAATAAATCACCGATTATTTTGTTTTCTCTTCTTCTTCTGC GATCCTTCATTGAATTTGATAGCCCAATTTCGTCTTATAGGAGCTTCATCTTTCACCTTT TTGTTCTTAATTGTGTTTCGCCATTGACGAAGAACACGAAGAGGTGAGAGAGATGAATTG GAGGACATTTGGGTGTGAAATTTTGAATCTTTTGGATGTTGGGATTTTGTGTTTTCTGGG ATCTTCTCAGAAATTCTGTGGAAGATGTGATGTTTGGTTTTAGGGGTTTGAGAATGATTG ATGGAGTTACTAGTATGTTGTTTTGAATTATCGGAATTGACGTTAAAAAAGGGATTTTTA GGTTTTGGCGTGAGAGGATGACTAGTATTCAGCCTTTGCTACAAAAATCGGAGTCTAGAG ATGATGTTCGTGCTGAGTTTGAGAGAGGTTTGGAGGAATTCATGCGTGGGCACTTGGACG AGTGTATCTCATTTGGGTCTTGTAGTTCTGTTCACAACCCTGAGGATGAGGATAATGAGG ATGATCAGCTTGTGAGGAGGAGACGAAGGTCTGAACTTGAAGGGGATAATTTGGCTGAAT CATCTGCTGCAAGAAGACGCCAATCTCAAATTTTGAGCCGTTGGGCTGCTAGGCAGGCTC AGGAGATGATTACTACGATTGAGAGGAGGAATCGAGAGTCTGAGTTGATTGCGTTGGCTG GTTTGCAAACGGTCTCTATGCTTGATTCTTCTTTTCTTAGGGAGTCTCAGTCTCAGTCTC CGTCTTCAAGGCGTCAGGGTGCTGCTAGTGAGAGGCCTAACACTCAGGCATCTGGGATTT TGCAGATGTGGAGGGAATTGGAAGATGAGCATGTGCTTAACAGGGCACGTGAAAGGGTGA GGGAAAGATTGAGGCAGCAAAGAAGTGTTGAGTCTAATACTAATTTATCTAGCTCTATTG CTTCGGAGAGTCAGCTGAGTGAAAATAATGGGAGTCTGAGAGACTCAAGTGAGAGTGAGA ATGATTTCGGGTCTTGGTCACATGATCGGAATGAGCATGGGGATAATAATAATACTTCCA GTAGGGAACAATCTCCTGATCTTGGTGATGGCGAGAGGGAGAGGGTGAGGCATATTGCTC GTGGATGGATGGATAGTAGGATCAATGATCATTCATCTAATGTAAGGCAGAGAGACGATA ACCGTAGACCGGAGTGGCTGGGTGATACTGAACGAGAAAGAGTCAGGATTATAAGAGAGT GGATGCAAATGACAAGTCAGCAGAGAGGAGGAGCTCGTGCAACACCGAGAGAAGATCAGA GGTCTACTTCAGAAGCTGATAGGAATCATGACGCTGCACCACAAGTTGACAGGGTCCGTG TAGGGTTAGCTGTTAACCATGAAGAAGGACAACCACCTCATGTTCGTCGAGACTTGCGGA GAGTTAGAGGTAGGCAGGCGTTACTTGATTTGCTTATGAGGGCTGAAAGGGAGAGACAAC GAGAACTTCAGGGCTTGTTGGAGCATCGTGCAGTGTCTGATTTTGCTCACCGCAATCGAA TTCAGTCGCTTCTTAGAGGAAGATTCTTGCGGAACGAGCGACCTACAGTTCCAGAGAGAA CTCCATCAATGGCTTCAAGGGAACTGCTTCAGCTAAGAGAAAGACAAACTGTCTCTGGCT TAAGGGAAGGGTTCCATAACGGGAGGGAAAATATTGTCCATGAAAATACTAGCAACACTG ATAATGATAATAGCAATACTTCCACAAATGCTCTTGCAATTGCAATCACTGCTGGGAATT CTCAGCGTGTAACCGATGAGAGTTCAACTTCTTCCAGACAAGGGAATGATAGTCCCATTT TGCCTGATAACTCAGAAAGCAACCTAGCAAATGCGGATAGAGACTGGGAAGAGGATACCA ATCAAAGAAGGATCTGGCAGGAAAATGTCCCAGTAGATGAGAGGCCAAATTTGGAGCAAA CAACTCTAACGCAATTTGATGGGTATGATAACACAGATATAAATCGTGATGAAACCTCTG TCAGTGACATGCACCGAGAAGCTAGTGGATTTGCAGATGATGAATATCGCACACAAGAAG CTCATGGTGTTTGGCATGAGAATAGCTCTAGACAATCCGATGGGAACTGGCCTGGGACAC GGTCAGAAGCCCTAAGGAGTCGCCGTGTAGTACAGTTGAGAAGATTAAATAGGTTCCATC CACCTGAGGATGACAATGTTTACAGCATGGAACTCAGGGAGCTCCTAAGCAGGAGAAGTG TTTCTAATCTACTACATAGTGGTTTCCGTGAAAGTCTTGATCAACTGATACAGTCATATG CTGAAAGGAGAGGACACACTCACGTAGACTGGGATCTGCACGCTAACCTGCAAACAGCAA TCCCAGATTCTCCAGAACGTGACACAGACCACCAAGTATTTGTGCGGAACGATAACCAAC TTAATGGCATCAATGGTTCACAACTGCTTCCCACTCCACCCGCGCCTCCACCCCAGCCAA TATGGCATCAAGATTTGCACCACACTAGCTGGTCTCGTCACTCTATGCATCGGTCTGAAA TTGAATGGGAGGTAATGAACGACCTAAGAGGAGACGTGGCAAGACTGCAGCAAGGAATGA GCCAGATGCAGAGGATGCTTGAAGCCTGCATGGATATGCAGTTAGAGCTGCAGCGTTCGG TTAGACAAGAGGTCTCTGCAGCCCTAAACCGATCTGCAGGTGACCAAGGTATGAGTGCGG AAACATCAGAGGATGGTTCAAGATGGAGCCATGTAAGCAAAGGAACTTGTTGCGTTTGTT GTGACAACCACATTGATGCTCTCTTGTATAGATGCGGACACATGTGTACTTGCTCAAAAT GTGCAAATGAGCTTGTAAGAAACGGAGGAAAATGTCCGCTTTGTAGAGCACCGATCATCG AGGTAATCCGAGCCTACTCCATTTTATAAGCCTCAGAGAAGAAGGTATAGAAGAAAGGAC CAGCAGAAAGAGATGTGTTTTGGTTTTGGGGTTAACATTATGTAGTTGTAGTATCTTCTT CAAATTCATATTTGATGTGTATAGTCTAAATTAAATTACTTAAAGGGAAGAAAAGAAAAG CTCTTATTGATTATGATTCATGTTTAAATCACATTTTACTTAGCCACATTTTATTTAGAG AAAAATATAAAATTCGGATAATTTTCAAATA