Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G04050.2
CDS Infomation	\| RNA-directed DNA polymerase (reverse transcriptase) \| Chr5:1096092-1098512 FORWARD LENGTH=2088 \| 201606
Sequence	ATGGTTTTGCGGCTGAGAGTTCACTCTTTCTACAACCGTGGAATCTCATTCCTTGTCTCT TCTTCCTTGAGGAATCTTAGTACTGCTTCTTCGCTTTTTTTGAACTCCGACCAAACCATC ACTGAGCCATTGGTGAAATCAGAGCTCGAAGCCCTAGTTCTCAAGCAATACTCTCATGGT AAGTTCTACAGTCTCGTTAAAAACGCCGTTTCTCTGCCTTGTGTCCTTCTCGCCGCCTGT CAGAATCTGTCTCTCTCCGCCAATTCGTCCGGAGATTTAGCCGATCGTGTCTCCCGGAGG TTCTCAATCGAAGAAATGGGGCGCGAGATACGCGAAGGCAGGTTTGATATTCGTTCATGT TGCGTCGAATTCATCTCTTCAAGTCTTGTTCTTCCCAATTTAAAACTCAAAGTGTTGATA GAAGCTATTAGAATGGTTCTTGAGATTGTGTATGATGATCGATTCGCTACGTTTTCGTAT GGTGGACGTGTTGGTATGGGTAGGCATACAGCGATTCGTTACCTGAAAAACTCGGTTGAG AATCCACGGTGGTGGTTTCGTGTTTCGTTTGCTCGAGAAATGTTTGAAGAACGTAATGTG GATATACTGTGTGGCTTTGTTGGAGAGAAGATCAACGATGTTATGTTGATTGAGATGATC AAGAAGCTGTTTGAGTTTGGGATTCTGAAGATTGAGCTTGGTGGATGTAATAGTGGAAGA GGTTTTCCACAAGAGTGTGGCTTGTGTTCGATTTTGATCAATGTTTACTTTGATGGACTT GACAAAGAGATTCAAGATTTGAGGCTAAAGATGAAAGTTAAGAATCCTCGCGTTGGTACA GGAGATGAGGAATCAACAGGTAATGTTTTCTTTAAGCCAGTGAATATTTATGCAGTTAGG TATTTGGATGAGATACTTGTGATAACATCAGGCTCGAAAATGCTGACGATGGATTTGAAG AAGCGGATTGTTGACATTTTGGAACAGAGACTAGAGTTGAGAGTAGATAGATTGAACACA TCGATTCATAGTGCAGTGTCAGAGAAGATTAACTTTTTAGGGATGTATCTTCAGGCTGTT CCACCTTCGGTTTTGCGCCCGCCTAAGTCTGAGAAGGCGGTCAGAGCAATGAAGAAGTAT CAGAGGCAGAAAGACGTTAGGAAGTTGGAGTTAAGAAATGCTAGGGAGAGGAATCGTAAG ACACTGGGGCTTAAAATATTTAGACATGTCTTGAAGAAAATCAAGCAGAGCAATGGGTTT AAATTTGAAGGTGAGATAGAGAATGAGGTTAGGGATATTTTCCAGAGCTGGGGAGAGGAA GTTATGCAAGACTTTATGGGTTCTCTCGAAGAGCGATGGAAATGGCACTGGCTGCTCACT AGAGGAGATTTTCTCTCTTTGAGACATATTAGAGAGAAATTACCACAAGACCTGATTGAT GCTTATGATGAATTTCAGGAGCAGGTGGACAAACATTTGGCTCCGACCCAGGCTAAAAAG GTACTTGAGGATGAGGAGAGGAGAGTAGAAGAAGAAGAGGAACAGAGATATGCTGAAAGG ACAGTTGAGGATTTGACTAAGTTATGCATGAAGGTGTCAGCTCCGGAGGAACTTGTCAGA AAGGCTATTAAAGTATCAGATCTTGACGGGAGGGAAGAGGCCCATTTTCCATCGGAAAGA GAGGTTAAGATGATGGGAGACAAGAACCTTTCAGACCCTAAACCTGTGGATGGCACACTA TCGTTGCTTTTGATCAGGCTCGCATCTGATGAGCCCTTGCATCACTGTGCTGCTAGTTTT TGTGAACGATCAGATACAATTATGCACCGTGTACATCTACTGCAAAACCGTTTACATATC AACCCACTAGACGAAGAGAAATGGGTTCCTGGCATGGGCACCATCCACTCAGCTTTGAAT CGGAAATGTCTCCCTTTGTGCTCCACTCACATCAGTGATGTATACTTGGGTAAAATAACC CTTCAGGATGTTGATAGTAGTTCATTCATCGATCTCAGGCGAAAATGCGTGCCAACAGGG TGTATCACATACACATTTTGTCTTGATTTCATCATGATAGGAAAATGA

Peptide Sequence

PEP ID	AT5G04050.2
PEP Infomation	\| RNA-directed DNA polymerase (reverse transcriptase) \| Chr5:1096092-1098512 FORWARD LENGTH=695 \| 201606
Sequence	MVLRLRVHSFYNRGISFLVSSSLRNLSTASSLFLNSDQTITEPLVKSELEALVLKQYSHG KFYSLVKNAVSLPCVLLAACQNLSLSANSSGDLADRVSRRFSIEEMGREIREGRFDIRSC CVEFISSSLVLPNLKLKVLIEAIRMVLEIVYDDRFATFSYGGRVGMGRHTAIRYLKNSVE NPRWWFRVSFAREMFEERNVDILCGFVGEKINDVMLIEMIKKLFEFGILKIELGGCNSGR GFPQECGLCSILINVYFDGLDKEIQDLRLKMKVKNPRVGTGDEESTGNVFFKPVNIYAVR YLDEILVITSGSKMLTMDLKKRIVDILEQRLELRVDRLNTSIHSAVSEKINFLGMYLQAV PPSVLRPPKSEKAVRAMKKYQRQKDVRKLELRNARERNRKTLGLKIFRHVLKKIKQSNGF KFEGEIENEVRDIFQSWGEEVMQDFMGSLEERWKWHWLLTRGDFLSLRHIREKLPQDLID AYDEFQEQVDKHLAPTQAKKVLEDEERRVEEEEEQRYAERTVEDLTKLCMKVSAPEELVR KAIKVSDLDGREEAHFPSEREVKMMGDKNLSDPKPVDGTLSLLLIRLASDEPLHHCAASF CERSDTIMHRVHLLQNRLHINPLDEEKWVPGMGTIHSALNRKCLPLCSTHISDVYLGKIT LQDVDSSSFIDLRRKCVPTGCITYTFCLDFIMIGK

Transcript Sequence

Transcript ID	AT5G04050.2
Transcript Infomation	\| RNA-directed DNA polymerase (reverse transcriptase) \| Chr5:1096016-1098920 FORWARD LENGTH=2572 \| 201606
Sequence	AATTTGTTTTCTCCCTCTCTGCTCTGCTCCTCCTCCGTCGCCGCCGGTGAACACTTCGCT GAACTTTTTCTATTCCATGGTTTTGCGGCTGAGAGTTCACTCTTTCTACAACCGTGGAAT CTCATTCCTTGTCTCTTCTTCCTTGAGGAATCTTAGTACTGCTTCTTCGCTTTTTTTGAA CTCCGACCAAACCATCACTGAGCCATTGGTGAAATCAGAGCTCGAAGCCCTAGTTCTCAA GCAATACTCTCATGGTAAGTTCTACAGTCTCGTTAAAAACGCCGTTTCTCTGCCTTGTGT CCTTCTCGCCGCCTGTCAGAATCTGTCTCTCTCCGCCAATTCGTCCGGAGATTTAGCCGA TCGTGTCTCCCGGAGGTTCTCAATCGAAGAAATGGGGCGCGAGATACGCGAAGGCAGGTT TGATATTCGTTCATGTTGCGTCGAATTCATCTCTTCAAGTCTTGTTCTTCCCAATTTAAA ACTCAAAGTGTTGATAGAAGCTATTAGAATGGTTCTTGAGATTGTGTATGATGATCGATT CGCTACGTTTTCGTATGGTGGACGTGTTGGTATGGGTAGGCATACAGCGATTCGTTACCT GAAAAACTCGGTTGAGAATCCACGGTGGTGGTTTCGTGTTTCGTTTGCTCGAGAAATGTT TGAAGAACGTAATGTGGATATACTGTGTGGCTTTGTTGGAGAGAAGATCAACGATGTTAT GTTGATTGAGATGATCAAGAAGCTGTTTGAGTTTGGGATTCTGAAGATTGAGCTTGGTGG ATGTAATAGTGGAAGAGGTTTTCCACAAGAGTGTGGCTTGTGTTCGATTTTGATCAATGT TTACTTTGATGGACTTGACAAAGAGATTCAAGATTTGAGGCTAAAGATGAAAGTTAAGAA TCCTCGCGTTGGTACAGGAGATGAGGAATCAACAGGTAATGTTTTCTTTAAGCCAGTGAA TATTTATGCAGTTAGGTATTTGGATGAGATACTTGTGATAACATCAGGCTCGAAAATGCT GACGATGGATTTGAAGAAGCGGATTGTTGACATTTTGGAACAGAGACTAGAGTTGAGAGT AGATAGATTGAACACATCGATTCATAGTGCAGTGTCAGAGAAGATTAACTTTTTAGGGAT GTATCTTCAGGCTGTTCCACCTTCGGTTTTGCGCCCGCCTAAGTCTGAGAAGGCGGTCAG AGCAATGAAGAAGTATCAGAGGCAGAAAGACGTTAGGAAGTTGGAGTTAAGAAATGCTAG GGAGAGGAATCGTAAGACACTGGGGCTTAAAATATTTAGACATGTCTTGAAGAAAATCAA GCAGAGCAATGGGTTTAAATTTGAAGGTGAGATAGAGAATGAGGTTAGGGATATTTTCCA GAGCTGGGGAGAGGAAGTTATGCAAGACTTTATGGGTTCTCTCGAAGAGCGATGGAAATG GCACTGGCTGCTCACTAGAGGAGATTTTCTCTCTTTGAGACATATTAGAGAGAAATTACC ACAAGACCTGATTGATGCTTATGATGAATTTCAGGAGCAGGTGGACAAACATTTGGCTCC GACCCAGGCTAAAAAGGTACTTGAGGATGAGGAGAGGAGAGTAGAAGAAGAAGAGGAACA GAGATATGCTGAAAGGACAGTTGAGGATTTGACTAAGTTATGCATGAAGGTGTCAGCTCC GGAGGAACTTGTCAGAAAGGCTATTAAAGTATCAGATCTTGACGGGAGGGAAGAGGCCCA TTTTCCATCGGAAAGAGAGGTTAAGATGATGGGAGACAAGAACCTTTCAGACCCTAAACC TGTGGATGGCACACTATCGTTGCTTTTGATCAGGCTCGCATCTGATGAGCCCTTGCATCA CTGTGCTGCTAGTTTTTGTGAACGATCAGATACAATTATGCACCGTGTACATCTACTGCA AAACCGTTTACATATCAACCCACTAGACGAAGAGAAATGGGTTCCTGGCATGGGCACCAT CCACTCAGCTTTGAATCGGAAATGTCTCCCTTTGTGCTCCACTCACATCAGTGATGTATA CTTGGGTAAAATAACCCTTCAGGATGTTGATAGTAGTTCATTCATCGATCTCAGGCGAAA ATGCGTGCCAACAGGGTGTATCACATACACATTTTGTCTTGATTTCATCATGATAGGAAA ATGAATGAATACTTCATAAGCAACTGTCTGGCTGCGCAATGGCATAGTAAGCTTCATAAT TGTCAGGGGGTTTGGTTCTTCTCAGGATCAGGAAACAAAGATTTGAGCATTAGTTACCTG AAAAACGCAATGATCATCTGCATACACCTGAGCTGTACCTTGCACGGAGCGAACATGTTT GTTCCTTTACGGTCGTCAGTATCACGCTCAGCATTGTGATCTCATTTGACACACCAAAAG CAGTTGACACGATGGATATTTGTCGAATTGGCGGTTGGCAATTGACAGTTGTATAACTAT AATTTTGCAATCGTGTAATGTATGAATCTACATTTTAGTATTGTAGTAGTAAGAGGGACA CTTTTCTTCTGTATCATGTAAAGAAAGAAGTGAGGTCAATTACTGTTCTGGT