Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G03800.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:1010894-1013584 REVERSE LENGTH=2691 \| 201606
Sequence	ATGTCCACCGTTAATCATCACTGCCTCCTCAATTTTCCTCATATCCCACCTTCAATTCCT CCGAATCATCGTCCCAAACTTCTTTCTTCTCTCTCCCTCTATCGAAAACCAGAACGCCTC TTTGCTCTCTCTGCGTCTCTGTCTCTTTCACCAGCAACAATCCATGAATGTTCTTCTTCC TCATCTTCTTCTTCTTCATCGTTCGATAAAGAAGAAACGGAAGACATTGAATCTGTTATT GATGGGTTTTTCTATCTGCTTCGATTGTCTGCTCAATACCACGACGTCGAGGTAACAAAA GCTGTGCACGCTTCGTTTCTTAAGCTCAGAGAAGAAAAAACCCGTCTTGGAAATGCCCTT ATCTCTACTTATCTCAAACTTGGTTTCCCTCGTGAAGCTATTCTCGTCTTCGTGTCTCTG TCTTCGCCAACGGTGGTTTCTTACACAGCTCTTATCTCGGGTTTCTCAAGGTTAAACCTT GAAATTGAGGCTCTTAAGGTTTTCTTCAGGATGAGAAAAGCAGGTCTTGTTCAGCCGAAT GAGTATACTTTTGTAGCGATTTTGACTGCTTGCGTGAGAGTTTCCCGATTCTCGCTTGGG ATTCAGATTCATGGATTGATAGTTAAATCAGGGTTTTTGAATTCTGTGTTTGTTAGTAAT TCGCTGATGAGTTTGTATGATAAGGATTCTGGGTCTTCGTGTGATGATGTGCTTAAGTTG TTCGATGAAATTCCTCAGAGAGATGTGGCGTCTTGGAACACTGTGGTTTCGAGTTTAGTG AAAGAGGGCAAGTCTCATAAAGCTTTCGATTTGTTTTATGAGATGAATAGAGTCGAAGGA TTTGGAGTTGATAGTTTTACGCTTTCAACGCTTTTGAGCTCTTGTACTGATTCTAGTGTC TTATTGAGAGGTAGAGAACTCCATGGTCGTGCAATTAGGATAGGGTTGATGCAGGAGTTG AGTGTGAACAACGCTCTGATTGGGTTTTATTCTAAATTTTGGGATATGAAAAAGGTAGAG AGTTTATACGAGATGATGATGGCGCAAGATGCTGTTACTTTCACGGAGATGATCACAGCT TACATGTCATTTGGAATGGTGGATTCCGCTGTTGAGATATTCGCGAATGTAACTGAAAAA AACACTATTACGTATAATGCGCTCATGGCTGGGTTCTGTAGAAATGGCCATGGCTTGAAG GCACTAAAATTATTCACTGATATGCTGCAGAGAGGTGTTGAGTTGACGGATTTTAGTTTA ACAAGCGCTGTTGATGCTTGTGGTTTAGTTTCAGAGAAGAAAGTAAGCGAACAGATTCAC GGGTTTTGTATTAAGTTTGGAACTGCTTTCAACCCTTGTATCCAGACTGCATTGCTTGAT ATGTGCACAAGGTGTGAAAGGATGGCAGATGCTGAGGAGATGTTTGACCAATGGCCTTCT AATCTCGATAGCTCGAAAGCAACGACGTCTATAATCGGTGGTTACGCTCGGAATGGCTTA CCTGATAAGGCTGTATCGCTATTCCATCGCACTCTCTGTGAACAGAAGTTGTTTTTAGAT GAAGTTTCGTTGACTTTGATTCTTGCGGTCTGCGGGACATTAGGTTTTCGGGAAATGGGT TATCAGATCCATTGCTATGCTCTTAAAGCTGGGTACTTTTCTGATATAAGCTTGGGAAAT TCTTTGATTAGCATGTACGCGAAATGTTGTGACTCAGATGATGCCATAAAGATTTTCAAC ACTATGCGAGAACATGATGTTATTTCTTGGAACAGCTTGATTTCTTGCTACATCCTTCAA AGAAATGGTGATGAGGCACTGGCTCTATGGTCGAGGATGAATGAGAAAGAGATCAAGCCT GACATAATCACCCTCACTCTTGTTATTTCTGCATTTCGGTATACAGAGTCAAATAAGCTT AGTAGCTGCCGTGATCTGTTTCTCTCCATGAAGACTATCTATGACATTGAACCAACGACT GAACATTACACTGCATTCGTCCGTGTTCTTGGTCATTGGGGTCTTCTTGAAGAAGCGGAA GACACAATAAACTCAATGCCGGTTCAGCCCGAGGTCTCTGTTTTGAGAGCTCTGCTTGAT AGCTGCAGAATACATTCAAACACAAGCGTTGCGAAACGAGTAGCAAAGCTTATACTATCT ACAAAGCCAGAAACCCCGTCTGAGTACATCCTCAAATCCAACATCTACTCAGCTTCCGGA TTCTGGCATCGCTCTGAAATGATAAGAGAGGAAATGCGGGAAAGAGGTTACCGGAAACAT CCTGCTAAAAGCTGGATAATCCATGAGAACAAAATACATTCCTTTCACGCGCGTGACACA TCCCACCCGCAAGAGAAAGACATATACAGGGGATTGGAGATACTGATAATGGAATGTCTG AAAGTTGGATACGAACCAAACACAGAGTATGTTCTTCAGGAGGTTGATGAGTTTATGAAG AAGAGTTTCTTGTTTCACCACAGCGCGAAACTCGCAGTGACTTATGGAATTCTCTCGAGC AATACTCGGGGCAAGCCGGTTCGGGTTATGAAGAACGTAATGCTCTGTGGTGATTGCCAC GAGTTCTTCAAGTATATTTCAGTTGTGGTAAAAAGAGAGATAGTTTTGAGAGATTCCTCA GGGTTTCATCATTTTGTGAATGGCAAGTGTTCTTGTAGAGATCTGTGGTGA

Peptide Sequence

PEP ID	AT5G03800.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:1010894-1013584 REVERSE LENGTH=896 \| 201606
Sequence	MSTVNHHCLLNFPHIPPSIPPNHRPKLLSSLSLYRKPERLFALSASLSLSPATIHECSSS SSSSSSSFDKEETEDIESVIDGFFYLLRLSAQYHDVEVTKAVHASFLKLREEKTRLGNAL ISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPN EYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKL FDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSV LLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITA YMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSL TSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPS NLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG YQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQ RNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTT EHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILS TKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDT SHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSS NTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW

Transcript Sequence

Transcript ID	AT5G03800.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:1010766-1013678 REVERSE LENGTH=2913 \| 201606
Sequence	TACAAAAATGGTCCTTCTCTTCTGAAGTAAATAGAACAAGTGAGAAAGGTTTATCCATGG CGATTTAGGCGCCCAAAAGCTCAAAAATTCATTCATGTCCACCGTTAATCATCACTGCCT CCTCAATTTTCCTCATATCCCACCTTCAATTCCTCCGAATCATCGTCCCAAACTTCTTTC TTCTCTCTCCCTCTATCGAAAACCAGAACGCCTCTTTGCTCTCTCTGCGTCTCTGTCTCT TTCACCAGCAACAATCCATGAATGTTCTTCTTCCTCATCTTCTTCTTCTTCATCGTTCGA TAAAGAAGAAACGGAAGACATTGAATCTGTTATTGATGGGTTTTTCTATCTGCTTCGATT GTCTGCTCAATACCACGACGTCGAGGTAACAAAAGCTGTGCACGCTTCGTTTCTTAAGCT CAGAGAAGAAAAAACCCGTCTTGGAAATGCCCTTATCTCTACTTATCTCAAACTTGGTTT CCCTCGTGAAGCTATTCTCGTCTTCGTGTCTCTGTCTTCGCCAACGGTGGTTTCTTACAC AGCTCTTATCTCGGGTTTCTCAAGGTTAAACCTTGAAATTGAGGCTCTTAAGGTTTTCTT CAGGATGAGAAAAGCAGGTCTTGTTCAGCCGAATGAGTATACTTTTGTAGCGATTTTGAC TGCTTGCGTGAGAGTTTCCCGATTCTCGCTTGGGATTCAGATTCATGGATTGATAGTTAA ATCAGGGTTTTTGAATTCTGTGTTTGTTAGTAATTCGCTGATGAGTTTGTATGATAAGGA TTCTGGGTCTTCGTGTGATGATGTGCTTAAGTTGTTCGATGAAATTCCTCAGAGAGATGT GGCGTCTTGGAACACTGTGGTTTCGAGTTTAGTGAAAGAGGGCAAGTCTCATAAAGCTTT CGATTTGTTTTATGAGATGAATAGAGTCGAAGGATTTGGAGTTGATAGTTTTACGCTTTC AACGCTTTTGAGCTCTTGTACTGATTCTAGTGTCTTATTGAGAGGTAGAGAACTCCATGG TCGTGCAATTAGGATAGGGTTGATGCAGGAGTTGAGTGTGAACAACGCTCTGATTGGGTT TTATTCTAAATTTTGGGATATGAAAAAGGTAGAGAGTTTATACGAGATGATGATGGCGCA AGATGCTGTTACTTTCACGGAGATGATCACAGCTTACATGTCATTTGGAATGGTGGATTC CGCTGTTGAGATATTCGCGAATGTAACTGAAAAAAACACTATTACGTATAATGCGCTCAT GGCTGGGTTCTGTAGAAATGGCCATGGCTTGAAGGCACTAAAATTATTCACTGATATGCT GCAGAGAGGTGTTGAGTTGACGGATTTTAGTTTAACAAGCGCTGTTGATGCTTGTGGTTT AGTTTCAGAGAAGAAAGTAAGCGAACAGATTCACGGGTTTTGTATTAAGTTTGGAACTGC TTTCAACCCTTGTATCCAGACTGCATTGCTTGATATGTGCACAAGGTGTGAAAGGATGGC AGATGCTGAGGAGATGTTTGACCAATGGCCTTCTAATCTCGATAGCTCGAAAGCAACGAC GTCTATAATCGGTGGTTACGCTCGGAATGGCTTACCTGATAAGGCTGTATCGCTATTCCA TCGCACTCTCTGTGAACAGAAGTTGTTTTTAGATGAAGTTTCGTTGACTTTGATTCTTGC GGTCTGCGGGACATTAGGTTTTCGGGAAATGGGTTATCAGATCCATTGCTATGCTCTTAA AGCTGGGTACTTTTCTGATATAAGCTTGGGAAATTCTTTGATTAGCATGTACGCGAAATG TTGTGACTCAGATGATGCCATAAAGATTTTCAACACTATGCGAGAACATGATGTTATTTC TTGGAACAGCTTGATTTCTTGCTACATCCTTCAAAGAAATGGTGATGAGGCACTGGCTCT ATGGTCGAGGATGAATGAGAAAGAGATCAAGCCTGACATAATCACCCTCACTCTTGTTAT TTCTGCATTTCGGTATACAGAGTCAAATAAGCTTAGTAGCTGCCGTGATCTGTTTCTCTC CATGAAGACTATCTATGACATTGAACCAACGACTGAACATTACACTGCATTCGTCCGTGT TCTTGGTCATTGGGGTCTTCTTGAAGAAGCGGAAGACACAATAAACTCAATGCCGGTTCA GCCCGAGGTCTCTGTTTTGAGAGCTCTGCTTGATAGCTGCAGAATACATTCAAACACAAG CGTTGCGAAACGAGTAGCAAAGCTTATACTATCTACAAAGCCAGAAACCCCGTCTGAGTA CATCCTCAAATCCAACATCTACTCAGCTTCCGGATTCTGGCATCGCTCTGAAATGATAAG AGAGGAAATGCGGGAAAGAGGTTACCGGAAACATCCTGCTAAAAGCTGGATAATCCATGA GAACAAAATACATTCCTTTCACGCGCGTGACACATCCCACCCGCAAGAGAAAGACATATA CAGGGGATTGGAGATACTGATAATGGAATGTCTGAAAGTTGGATACGAACCAAACACAGA GTATGTTCTTCAGGAGGTTGATGAGTTTATGAAGAAGAGTTTCTTGTTTCACCACAGCGC GAAACTCGCAGTGACTTATGGAATTCTCTCGAGCAATACTCGGGGCAAGCCGGTTCGGGT TATGAAGAACGTAATGCTCTGTGGTGATTGCCACGAGTTCTTCAAGTATATTTCAGTTGT GGTAAAAAGAGAGATAGTTTTGAGAGATTCCTCAGGGTTTCATCATTTTGTGAATGGCAA GTGTTCTTGTAGAGATCTGTGGTGAATCGACCAAGACCCTTAGTTTTTGTAATGTTTTCT TTTATAAATTCGTAAGTTGTTAATACGAGAGTTTTGGTTCTGATAGCTACATAGTCCATT CAAAGTTTCAAATAAAAAAGCATTGCAAACGCA