Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G02840.1
CDS Infomation	\| LHY/CCA1-like 1 \| Chr5:648794-651212 FORWARD LENGTH=882 \| 201606
Sequence	ATGACCTCAACCAATCCGGTGGTCGCCGAAGTAATACCGGCGGAAACTTCTACAGATGCT ACAGAGACGACGATTGCAACGACGGAAGCTGGTGAAGCACCGGAGAAGAAGGTGAGGAAA GCTTACACAATCACCAAGTCTAGAGAGAGTTGGACTGAAGGAGAACACGACAAGTTTCTG GAAGCTCTTCAATTGTTTGATCGTGACTGGAAAAAGATAGAAGATTTTGTTGGTTCAAAG ACAGTTATTCAGATCAGGAGCCATGCCCAAAAATACTTTCTAAAGGTCCAAAAAAATGGG ACTTTAGCACATGTTCCACCCCCTAGGCCTAAGCGCAAAGCTGCTCATCCATATCCTCAA AAGGCATCGAAAAATGCTCAAATGTCGCTTCACGTTTCCATGTCCTTTCCTACTCAAATA AATAACCTGCCTGGATATACTCCATGGGATGATGATACATCTGCATTGTTAAACATTGCT GTAAGTGGGGTTATTCCACCAGAAGATGAACTTGATACTCTTTGTGGAGCAGAAGTTGAT GTTGGATCAAATGACATGATAAGTGAAACTAGTCCTTCAGCATCTGGTATCGGAAGCTCA AGCAGAACACTATCAGATTCTAAGGGTTTGAGACTGGCGAAACAAGCTCCCTCAATGCAT GGTCTTCCTGATTTTGCTGAGGTTTATAACTTCATTGGGAGTGTGTTCGATCCTGACAGC AAAGGCCGCATGAAAAAGCTCAAGGAAATGGATCCTATAAATTTCGAAACTGTTTTGCTG TTGATGAGAAACCTCACAGTGAACTTGTCAAACCCTGACTTTGAACCTACTTCTGAATAT GTTGATGCTGCAGAGGAAGGTCATGAACACTTAAGCTCTTAG

Peptide Sequence

PEP ID	AT5G02840.1
PEP Infomation	\| LHY/CCA1-like 1 \| Chr5:648794-651212 FORWARD LENGTH=293 \| 201606
Sequence	MTSTNPVVAEVIPAETSTDATETTIATTEAGEAPEKKVRKAYTITKSRESWTEGEHDKFL EALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQ KASKNAQMSLHVSMSFPTQINNLPGYTPWDDDTSALLNIAVSGVIPPEDELDTLCGAEVD VGSNDMISETSPSASGIGSSSRTLSDSKGLRLAKQAPSMHGLPDFAEVYNFIGSVFDPDS KGRMKKLKEMDPINFETVLLLMRNLTVNLSNPDFEPTSEYVDAAEEGHEHLSS

Transcript Sequence

Transcript ID	AT5G02840.1
Transcript Infomation	\| LHY/CCA1-like 1 \| Chr5:648648-651979 FORWARD LENGTH=1476 \| 201606
Sequence	CTGAAATTGCAAGCGAAGCGTCTCCACATATTATACACCAACTTCTTGCCCGCCATGTGG ATATCGTCGTCATTTCTCTCTCTAACCCCTTCTCTCTTCAGTCTCTCTCTCTCTAGACGA TCTCTATCTTGAATAAAATACCGATAATGACCTCAACCAATCCGGTGGTCGCCGAAGTAA TACCGGCGGAAACTTCTACAGATGCTACAGAGACGACGATTGCAACGACGGAAGCTGGTG AAGCACCGGAGAAGAAGGTGAGGAAAGCTTACACAATCACCAAGTCTAGAGAGAGTTGGA CTGAAGGAGAACACGACAAGTTTCTGGAAGCTCTTCAATTGTTTGATCGTGACTGGAAAA AGATAGAAGATTTTGTTGGTTCAAAGACAGTTATTCAGATCAGGAGCCATGCCCAAAAAT ACTTTCTAAAGGTCCAAAAAAATGGGACTTTAGCACATGTTCCACCCCCTAGGCCTAAGC GCAAAGCTGCTCATCCATATCCTCAAAAGGCATCGAAAAATGCTCAAATGTCGCTTCACG TTTCCATGTCCTTTCCTACTCAAATAAATAACCTGCCTGGATATACTCCATGGGATGATG ATACATCTGCATTGTTAAACATTGCTGTAAGTGGGGTTATTCCACCAGAAGATGAACTTG ATACTCTTTGTGGAGCAGAAGTTGATGTTGGATCAAATGACATGATAAGTGAAACTAGTC CTTCAGCATCTGGTATCGGAAGCTCAAGCAGAACACTATCAGATTCTAAGGGTTTGAGAC TGGCGAAACAAGCTCCCTCAATGCATGGTCTTCCTGATTTTGCTGAGGTTTATAACTTCA TTGGGAGTGTGTTCGATCCTGACAGCAAAGGCCGCATGAAAAAGCTCAAGGAAATGGATC CTATAAATTTCGAAACTGTTTTGCTGTTGATGAGAAACCTCACAGTGAACTTGTCAAACC CTGACTTTGAACCTACTTCTGAATATGTTGATGCTGCAGAGGAAGGTCATGAACACTTAA GCTCTTAGCTGTTTGTGCACTCAACAAGTTATATATCTTCTTGACGACTTCTTGCTCGCA ACAACTCTCTACCAGCTATCAAATGCATTCTACGGTTGTTGTCTGAGGAGAACATAACTG AGTCGTCGTCACAAACAAGAGGAACATATGCAGTTTCGGTCAGAACCAGTCGTGTGAATG GTAGATATATGTATGTGTGTGTAGAAAATGGTTACCAATTGTATCTTCTTTTTGATAATT ATTTTTTCATGCCTTTTGTAATATGTAAGTTTCTTTACCTCGTTCTCTGATTGGTTATTT TCTGGTTATCTGTTTAACCAAAAGCTATGTAACACAGTAGCAAATTGTTACTTAACTCGG AAGTGAGATACATAACTCTGTTGTATTGCACTTGTATCAAGCGTTAACGTCCATGATTCG TCTCTGTTATTGTCAATAACAATTGTTCGAAAGCCA