Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G02330.1
CDS Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr5:487272-489242 REVERSE LENGTH=1971 \| 201606
Sequence	ATGAATTCAAATTCAGTCGGTGTATTTCGTGAGAAGGAAATCGATGGGAAACCATTCCAC ACATACACTTTATCATCTCAAACAGACACCACAACCCCTTCTTCTTCCGGTGAAACAGCC ATTGATGGCGACGACCATCTCTCTCTTCAACAACCTCTTTTCCTCTGTCCTTCTTTACGT CTTAAAGCTGACGAGATAAACTATTCTTATAGTGAAATTCTACCGTTCAATATTTCCCCG TACTTCCCCAGCATAAGAGGCGCTGATCAACAAGTCCAGCATTTGCTTGATTCCGACAGC CAACAAGTCCATGATTTGCTTCATTCCGACAACAGCCATGATGATGATGGTGATGAAATC TGTAAGCTCCCAGTTGTCCCTATCTATTGGTGTAACAGTAAAGAAATTGAGTTCGATCAA TTCAATTGCGGTGCATGTGAACGATCAAAGATTGGCACAGACTATTATATCTGTCTCACG TGTGATCTAATGTTCCACAAAGAATGCGTGGAGTCTCCCCTTGAGATCAAACACCCTTCC TATCCCTTTCTTTCACTCAAACTTTACACTCGTCACGAGCAGCTCATGAGTTGCATGTGC TGTAAACACCCTTCCAATCTTATTTTTTATTATTGTCCCACCTACAAATTGAGTTTGCAT CCCGATTGTGCGATGAAGCCAATATCCATTTTTATAGACCACCCAAAAAGGCATCCCCAC CTTCTCACCTTTTTTCCCAAACAAGCTTCCTTACTTTGCGATGTTTGTAGCCTCATTAAA GAAGCTTTCCCCACCTATGTGTGTCTTCGATGTATCTTTGTAGCCCATCGAGATTGTATC TATTTCCCGTATGTCATTAAAATATGTCGTCACCAACACCGTATCTCTTTTACCTCTTCT CTTCCATCTGGAAAATGGTCTTGTGGAGTATGTCGTAAAAAGGTTGACAACAATTGTGGT GCATACACTTGCAACAAGTGTAGCCACTATTTTGTTCATACAAGATGTGCGTTACGGGAA GACTTGTGGGATGGAAAGGATCTCGAGGGAGTACCTGAAGAACCTGAAATAATTCTCGAG CCATTTGAGACGATAGCTGATGGAATAATACTCCATTTTTCTCATGGCCATCATCTGAAA CTCAAGACCAGTGGAGTTTACAACGAAAACATTATTTGTCAAGCGTGCATCCTTCCAATC TATGAGGGTAATTATTACTCGTGTATGGATCAATGCAACTTCATCCTCCACGAAGCATGT GCAAATGCTTCTCGCAAGAAAGATCATGCCTTACACAGTCACCCACTTACGCTAAAAGTT GTCTCTGATATACAGAATGAATACTTTAAAGGTTACTTCAGGTGTTCCGCTTGTGATCGT GAAAGTTGTGGCTTCATCTATGAGGAGGATCAATACAGCATAGACATACGGTGTGCCTCT GTTTCTGAACCATTTGATTATCAAGGCCATGAGCATCCCTTATTCCAAGCTTTAGACCGA AAAGAAGAAAGGGAGGCAATTTGTCAAATTTGCCGAAAAAAGTATGGTCGAAAACTAAAT TGCATCGAATGCAATTATATTATATGTTTCAGTTGTGCTACTTTACCATACAAGGCAAAG TATAAGCTTGACAAACATTTCCTCACATTTCGGGAAGGGGAAGAGGGAAGTGATCAGTTA GACTGGTGTGAGGTATGCGAAAAGAAATTAGAATACTCAAGAGAAGGTGGGTTCTATGCG TGTGATGACTGCTGCACCACTCTCCATGTTGATTGTTTGCTTGGAAAAGAGATGTATATG TTGAATCCTGGTCATACTGTAATGGCTTATAGGTCAAACATTTATATTCTTCCCAACAAT ACCATGACTCGACCATTCTGCCAACTTCATAAAGAAGATCGTTGTCCACACAAAGTAATT TTCAATTGGCATGACATGACATTTTGCTCTTACAGTTGTTCGATGGATTAG

Peptide Sequence

PEP ID	AT5G02330.1
PEP Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr5:487272-489242 REVERSE LENGTH=656 \| 201606
Sequence	MNSNSVGVFREKEIDGKPFHTYTLSSQTDTTTPSSSGETAIDGDDHLSLQQPLFLCPSLR LKADEINYSYSEILPFNISPYFPSIRGADQQVQHLLDSDSQQVHDLLHSDNSHDDDGDEI CKLPVVPIYWCNSKEIEFDQFNCGACERSKIGTDYYICLTCDLMFHKECVESPLEIKHPS YPFLSLKLYTRHEQLMSCMCCKHPSNLIFYYCPTYKLSLHPDCAMKPISIFIDHPKRHPH LLTFFPKQASLLCDVCSLIKEAFPTYVCLRCIFVAHRDCIYFPYVIKICRHQHRISFTSS LPSGKWSCGVCRKKVDNNCGAYTCNKCSHYFVHTRCALREDLWDGKDLEGVPEEPEIILE PFETIADGIILHFSHGHHLKLKTSGVYNENIICQACILPIYEGNYYSCMDQCNFILHEAC ANASRKKDHALHSHPLTLKVVSDIQNEYFKGYFRCSACDRESCGFIYEEDQYSIDIRCAS VSEPFDYQGHEHPLFQALDRKEEREAICQICRKKYGRKLNCIECNYIICFSCATLPYKAK YKLDKHFLTFREGEEGSDQLDWCEVCEKKLEYSREGGFYACDDCCTTLHVDCLLGKEMYM LNPGHTVMAYRSNIYILPNNTMTRPFCQLHKEDRCPHKVIFNWHDMTFCSYSCSMD

Transcript Sequence

Transcript ID	AT5G02330.1
Transcript Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr5:487114-489242 REVERSE LENGTH=2129 \| 201606
Sequence	ATGAATTCAAATTCAGTCGGTGTATTTCGTGAGAAGGAAATCGATGGGAAACCATTCCAC ACATACACTTTATCATCTCAAACAGACACCACAACCCCTTCTTCTTCCGGTGAAACAGCC ATTGATGGCGACGACCATCTCTCTCTTCAACAACCTCTTTTCCTCTGTCCTTCTTTACGT CTTAAAGCTGACGAGATAAACTATTCTTATAGTGAAATTCTACCGTTCAATATTTCCCCG TACTTCCCCAGCATAAGAGGCGCTGATCAACAAGTCCAGCATTTGCTTGATTCCGACAGC CAACAAGTCCATGATTTGCTTCATTCCGACAACAGCCATGATGATGATGGTGATGAAATC TGTAAGCTCCCAGTTGTCCCTATCTATTGGTGTAACAGTAAAGAAATTGAGTTCGATCAA TTCAATTGCGGTGCATGTGAACGATCAAAGATTGGCACAGACTATTATATCTGTCTCACG TGTGATCTAATGTTCCACAAAGAATGCGTGGAGTCTCCCCTTGAGATCAAACACCCTTCC TATCCCTTTCTTTCACTCAAACTTTACACTCGTCACGAGCAGCTCATGAGTTGCATGTGC TGTAAACACCCTTCCAATCTTATTTTTTATTATTGTCCCACCTACAAATTGAGTTTGCAT CCCGATTGTGCGATGAAGCCAATATCCATTTTTATAGACCACCCAAAAAGGCATCCCCAC CTTCTCACCTTTTTTCCCAAACAAGCTTCCTTACTTTGCGATGTTTGTAGCCTCATTAAA GAAGCTTTCCCCACCTATGTGTGTCTTCGATGTATCTTTGTAGCCCATCGAGATTGTATC TATTTCCCGTATGTCATTAAAATATGTCGTCACCAACACCGTATCTCTTTTACCTCTTCT CTTCCATCTGGAAAATGGTCTTGTGGAGTATGTCGTAAAAAGGTTGACAACAATTGTGGT GCATACACTTGCAACAAGTGTAGCCACTATTTTGTTCATACAAGATGTGCGTTACGGGAA GACTTGTGGGATGGAAAGGATCTCGAGGGAGTACCTGAAGAACCTGAAATAATTCTCGAG CCATTTGAGACGATAGCTGATGGAATAATACTCCATTTTTCTCATGGCCATCATCTGAAA CTCAAGACCAGTGGAGTTTACAACGAAAACATTATTTGTCAAGCGTGCATCCTTCCAATC TATGAGGGTAATTATTACTCGTGTATGGATCAATGCAACTTCATCCTCCACGAAGCATGT GCAAATGCTTCTCGCAAGAAAGATCATGCCTTACACAGTCACCCACTTACGCTAAAAGTT GTCTCTGATATACAGAATGAATACTTTAAAGGTTACTTCAGGTGTTCCGCTTGTGATCGT GAAAGTTGTGGCTTCATCTATGAGGAGGATCAATACAGCATAGACATACGGTGTGCCTCT GTTTCTGAACCATTTGATTATCAAGGCCATGAGCATCCCTTATTCCAAGCTTTAGACCGA AAAGAAGAAAGGGAGGCAATTTGTCAAATTTGCCGAAAAAAGTATGGTCGAAAACTAAAT TGCATCGAATGCAATTATATTATATGTTTCAGTTGTGCTACTTTACCATACAAGGCAAAG TATAAGCTTGACAAACATTTCCTCACATTTCGGGAAGGGGAAGAGGGAAGTGATCAGTTA GACTGGTGTGAGGTATGCGAAAAGAAATTAGAATACTCAAGAGAAGGTGGGTTCTATGCG TGTGATGACTGCTGCACCACTCTCCATGTTGATTGTTTGCTTGGAAAAGAGATGTATATG TTGAATCCTGGTCATACTGTAATGGCTTATAGGTCAAACATTTATATTCTTCCCAACAAT ACCATGACTCGACCATTCTGCCAACTTCATAAAGAAGATCGTTGTCCACACAAAGTAATT TTCAATTGGCATGACATGACATTTTGCTCTTACAGTTGTTCGATGGATTAGATGTCATCA TCGCCGGTGCTTCGTCGTCCCTTATTCGCTATATTTCACTCCCCATTTGCTTGTCTACGT TTTGTAATATGTTTCTTCTATTAAAACGTATTGTAATACTTTTGGATTCTTAACTTCTTC TAGTTCCCCATTTGCTCAATCTTCTTGTT