Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G01630.1
CDS Infomation	\| BRCA2-like B \| Chr5:235117-240911 REVERSE LENGTH=3468 \| 201606
Sequence	ATGTCGACGTGGCATTTATTTTCCGATTCCAGCGGCGATGGTTTCCGGTGGGAAGTCGCT GGCCGGATTCTTCAGTCCGTCTCGGATTCTACGCCAACCAAGGCGCTCGAATCGACAGCT CCTCTACCTTCCATGGCCGATCTCTTGCTCCAAGGATGCTCGAAGCTTATAGAACGGGAA GAATCGATGCCTGGGGAAATCCCAATGTTCAGGACTGGGCTGGGGAAGTCTGTAGTTCTT AAAGAGTCTTCGATTGCTAAAGCCAAATCCATTTTAGCAGAGAATGTTGCTTATTCAGAT TTGCAGAACACAAATTGCTCAATTCCCCAAACGAGACAAGTGGATACAGCTGAAACTATG CCAATGTTCAGGACGGCCTTGGGGAAAACTGTCCCTTTGAAAGAGTCTTCAATTGCCAAA CCTTTGTCTATTCTAGGAAGTGATATGATAATTGACTCAGACAACGTTCTTCCCAGGGAG AGTGGGTTTGGTGTTCCCAACAGTCTTTTTCAGACAGCTTCCAACAAAAAGGTTAATGTA TCTTCTGCCGGTTTAGCAAGAGCCAAGGCATTGTTAGGACTAGAAGAAGATGATTTGAAT GGATTTAACCATGTGAACCAGTCGTCTTCTTCCCTCCAGCAACATGGGTGGTCCGGTTTA AAAACTCATGAGGAGTTTGATGCTACAGTGGTTAAGCATCATTCAGGAACTCCAGGACAA TATGAGAATTATGTATCTGGGAAGAGATCTGAAATCTTAAATCCATCGTTAAAGGTGCCT CCAACAAAGTTTCAGACTGCTGGTGGAAAATCATTGTCAGTGTCAGCTGAGGCGTTGAAA CGTGCCAGAAACCTTCTTGGTGACCCTGAGTTAGGGTCTTTCTTTGATGATGTAGCTGGA GGTGATCAATTTTTTACACCACAGAAAGATGAAAGGCTAAGTGATATTGCTATAAACAAT GGAAGTGTCAACACAGGTTATATTGCTCATGAAGAAAAGACAAGCAACAAACATACGTCA AATAGTTTTGTATCTCCTCTTCATTCATCTTCAAAGCAATTTAGATCAGTTAACTTGGAG AACCTAGCTTCAGGGGGTAATTTGATCAAGAAATTTGATACGGCTGTTGATGAGACCAAT TGTGCTCTGAATATCAGTAAACCTGCTACACATGGACTATCAAATAACAGGCCTTTAGCA TCAGATATGGCAGTGAATAATTCCAAGGGAAACGGTTTCATTCCAAGAGCTAGGCAACTT GGAAGGCCTGCTGATCAGCCACTTGTTGATATAACAAATCGCAGAGATACAGCTTATGCA AACAATAAACAAGACAGTACCCAAAAGAAAAGGCTGGGAAAGACAGTCTCCGTTTCTCCT TTCAAAAGGCCAAGGATTTCATCCTTTAAAACTCCTTTAAAGAAAAATGCTCAGCAAGCT TCAAGTGGTTTGTCTGTTGTATCGTGTGATACACTTACTTCCAAAAAGGTACTTTCTACA AGATATCCAGAAAAGTCTCCAAGAGTATATATCAAGGAGTTTTTTGGAATGCATCCGACA GCTACGACCAGGATGGATTATGTGCCAGACCATGTCAGAAGAATCAAATCAAGTAATGCA GATAAATATGTATTCTGTGATGAGTCTTCTTCAAACAAGGTTGGAGCTGAAACTTTTCTT CAAATGTTGGCTGAGTCGGGTGCTTCCTTACAACATGCATCCAGAAAGTGGGTTACTAAT CACTACAGGTGGATAGTCTGGAAACTTGCATGCTACGACATATACTACCCAGCCAAATGC AGAGGAAACTTTCTAACAATCACCAATGTTCTTGAGGAACTAAAATACAGATATGAGAGA GAGGTCAATCATGGTCATTGCTCTGCAATCAAGAGGATTCTGAGTGGTGATGCTCCAGCT TCTTCAATGATGGTCCTCTGCATATCAGCTATTAATCCAAGGACCGATAATGGTTCTCAG GAAGCACATTGTTCTGATAATTGCAGCAATGTGAAAGTCGAACTCACTGATGGGTGGTAC TCGATGAATGCTGCTCTGGATGTCGTGCTAACCAAGCAGCTGAATGCTGGCAAATTGTTT GTGGGGCAGAAGCTTCGAATCCTCGGGGCAGGACTTTCTGGCTGGGCTACCCCAACATCA CCACTTGAGGCAGTGATTTCAAGTACAATCTGTTTGTTGTTGAATATTAATGGGACATAC AGAGCTCACTGGGCGGACCGACTAGGCTTCTGTAAAGAAATTGGTGTCCCTCTGGCTTTC AACTGTATCAAGTGCAATGGGGGTCCAGTGCCTAAAACGCTAGCTGGCATCACACGAATA TACCCCATCCTATACAAGGAAAGGTTAGGTGAAAAGAAGTCAATAGTTCGATCAGAGAGA ATAGAAAGTAGAATTATACAGCTGCATAATCAGAGGCGCTCAGCTCTTGTTGAGGGTATT ATGTGTGAGTACCAGAGAGGAATTAATGGTGTTCACAGCCAAAACGATACTGACAGCGAA GAAGGAGCCAAGGTCTTTAAGCTGTTAGAGACGGCTGCTGAACCTGAACTTCTTATGGCT GAAATGAGCCTAGAGCAGTTGACATCTTTCACTACATATAAAGCAAAATTTGAGGCAGCC AAGCAAATGCAGATGGAAAAATCAGTGGCAAAAGCTCTGGAAGACGCTGGTTTAGGTGAA AGGAACGTCACCCCATTCATGAGGATTAGGCTTGTTGGCCTGACGAGCTTAAGTAATGAA GGAGAGCACAATCCAAAAGAAGGCATTGTAACAATCTGGGATCCCACGGAGAGACAGAGA ACCGAGCTGACGGAGGGGAAAATATACATAATGAAAGGGCTAGTACCAATGAACTCAGAT TCAGAAACACTTTACTTACATGCCAGAGGGTCAAGCTCAAGATGGCAGCCTTTGTCTCCA AAAGATTCTGAAAATTTTCAGCCTTTTTTCAACCCTCGTAAACCAATCTCTTTGTCAAAT CTTGGTGAAATTCCTCTGTCAAGTGAATTTGATATCGCTGCGTACGTTGTATATGTTGGA GATGCATACACAGATGTTCTACAAAAGAAGCAGTGGGTGTTTGTGACAGATGGATCCACA CAACATTCAGGGGAAATCTCAAACAGTCTTCTTGCTATAAGCTTCAGCACCCCATTCATG GATGATAGCTCTGTTTCCCACATCAGCCATAATTTGGTTGGATCCGTGGTCGGATTTTGC AATCTAATTAAAAGAGCAAAGGATGCGACAAACGAAATGTGGGTTGCTGAGACAACAGAG AACTCAGTCTACTTCATAAACGCAGAAGCTGCCTACTCTTCTCACCTTAAAACCCGCAGT GCCCATATCCAAACATGGGCTAAGCTCTATTCTTCCAAATCCGTCATCCATGAACTTCGG CAAAGAGTCCTATTTATAATCGGTGCTTGTAAATCACCTTCATGCTGA

Peptide Sequence

PEP ID	AT5G01630.1
PEP Infomation	\| BRCA2-like B \| Chr5:235117-240911 REVERSE LENGTH=1155 \| 201606
Sequence	MSTWHLFSDSSGDGFRWEVAGRILQSVSDSTPTKALESTAPLPSMADLLLQGCSKLIERE ESMPGEIPMFRTGLGKSVVLKESSIAKAKSILAENVAYSDLQNTNCSIPQTRQVDTAETM PMFRTALGKTVPLKESSIAKPLSILGSDMIIDSDNVLPRESGFGVPNSLFQTASNKKVNV SSAGLARAKALLGLEEDDLNGFNHVNQSSSSLQQHGWSGLKTHEEFDATVVKHHSGTPGQ YENYVSGKRSEILNPSLKVPPTKFQTAGGKSLSVSAEALKRARNLLGDPELGSFFDDVAG GDQFFTPQKDERLSDIAINNGSVNTGYIAHEEKTSNKHTSNSFVSPLHSSSKQFRSVNLE NLASGGNLIKKFDTAVDETNCALNISKPATHGLSNNRPLASDMAVNNSKGNGFIPRARQL GRPADQPLVDITNRRDTAYANNKQDSTQKKRLGKTVSVSPFKRPRISSFKTPLKKNAQQA SSGLSVVSCDTLTSKKVLSTRYPEKSPRVYIKEFFGMHPTATTRMDYVPDHVRRIKSSNA DKYVFCDESSSNKVGAETFLQMLAESGASLQHASRKWVTNHYRWIVWKLACYDIYYPAKC RGNFLTITNVLEELKYRYEREVNHGHCSAIKRILSGDAPASSMMVLCISAINPRTDNGSQ EAHCSDNCSNVKVELTDGWYSMNAALDVVLTKQLNAGKLFVGQKLRILGAGLSGWATPTS PLEAVISSTICLLLNINGTYRAHWADRLGFCKEIGVPLAFNCIKCNGGPVPKTLAGITRI YPILYKERLGEKKSIVRSERIESRIIQLHNQRRSALVEGIMCEYQRGINGVHSQNDTDSE EGAKVFKLLETAAEPELLMAEMSLEQLTSFTTYKAKFEAAKQMQMEKSVAKALEDAGLGE RNVTPFMRIRLVGLTSLSNEGEHNPKEGIVTIWDPTERQRTELTEGKIYIMKGLVPMNSD SETLYLHARGSSSRWQPLSPKDSENFQPFFNPRKPISLSNLGEIPLSSEFDIAAYVVYVG DAYTDVLQKKQWVFVTDGSTQHSGEISNSLLAISFSTPFMDDSSVSHISHNLVGSVVGFC NLIKRAKDATNEMWVAETTENSVYFINAEAAYSSHLKTRSAHIQTWAKLYSSKSVIHELR QRVLFIIGACKSPSC

Transcript Sequence

Transcript ID	AT5G01630.1
Transcript Infomation	\| BRCA2-like B \| Chr5:234851-241106 REVERSE LENGTH=3929 \| 201606
Sequence	CAGAACTTTTAACTTTTTGGATTTTTGGTGATGATTTTGGTTTGGGGAAAGAAAATAAAA CAATAAAAATAAAAATTCCGCACTCCCGACTCCTCCCTCTTGGCGTGGTAGGCAATTCTG AATCGCGAGGTTTAGTTCTCCGGCTGAATCATATAACGACGAATCGGAAAACTTGGAAAC CCTAGAACTGAATAAATGTCGACGTGGCATTTATTTTCCGATTCCAGCGGCGATGGTTTC CGGTGGGAAGTCGCTGGCCGGATTCTTCAGTCCGTCTCGGATTCTACGCCAACCAAGGCG CTCGAATCGACAGCTCCTCTACCTTCCATGGCCGATCTCTTGCTCCAAGGATGCTCGAAG CTTATAGAACGGGAAGAATCGATGCCTGGGGAAATCCCAATGTTCAGGACTGGGCTGGGG AAGTCTGTAGTTCTTAAAGAGTCTTCGATTGCTAAAGCCAAATCCATTTTAGCAGAGAAT GTTGCTTATTCAGATTTGCAGAACACAAATTGCTCAATTCCCCAAACGAGACAAGTGGAT ACAGCTGAAACTATGCCAATGTTCAGGACGGCCTTGGGGAAAACTGTCCCTTTGAAAGAG TCTTCAATTGCCAAACCTTTGTCTATTCTAGGAAGTGATATGATAATTGACTCAGACAAC GTTCTTCCCAGGGAGAGTGGGTTTGGTGTTCCCAACAGTCTTTTTCAGACAGCTTCCAAC AAAAAGGTTAATGTATCTTCTGCCGGTTTAGCAAGAGCCAAGGCATTGTTAGGACTAGAA GAAGATGATTTGAATGGATTTAACCATGTGAACCAGTCGTCTTCTTCCCTCCAGCAACAT GGGTGGTCCGGTTTAAAAACTCATGAGGAGTTTGATGCTACAGTGGTTAAGCATCATTCA GGAACTCCAGGACAATATGAGAATTATGTATCTGGGAAGAGATCTGAAATCTTAAATCCA TCGTTAAAGGTGCCTCCAACAAAGTTTCAGACTGCTGGTGGAAAATCATTGTCAGTGTCA GCTGAGGCGTTGAAACGTGCCAGAAACCTTCTTGGTGACCCTGAGTTAGGGTCTTTCTTT GATGATGTAGCTGGAGGTGATCAATTTTTTACACCACAGAAAGATGAAAGGCTAAGTGAT ATTGCTATAAACAATGGAAGTGTCAACACAGGTTATATTGCTCATGAAGAAAAGACAAGC AACAAACATACGTCAAATAGTTTTGTATCTCCTCTTCATTCATCTTCAAAGCAATTTAGA TCAGTTAACTTGGAGAACCTAGCTTCAGGGGGTAATTTGATCAAGAAATTTGATACGGCT GTTGATGAGACCAATTGTGCTCTGAATATCAGTAAACCTGCTACACATGGACTATCAAAT AACAGGCCTTTAGCATCAGATATGGCAGTGAATAATTCCAAGGGAAACGGTTTCATTCCA AGAGCTAGGCAACTTGGAAGGCCTGCTGATCAGCCACTTGTTGATATAACAAATCGCAGA GATACAGCTTATGCAAACAATAAACAAGACAGTACCCAAAAGAAAAGGCTGGGAAAGACA GTCTCCGTTTCTCCTTTCAAAAGGCCAAGGATTTCATCCTTTAAAACTCCTTTAAAGAAA AATGCTCAGCAAGCTTCAAGTGGTTTGTCTGTTGTATCGTGTGATACACTTACTTCCAAA AAGGTACTTTCTACAAGATATCCAGAAAAGTCTCCAAGAGTATATATCAAGGAGTTTTTT GGAATGCATCCGACAGCTACGACCAGGATGGATTATGTGCCAGACCATGTCAGAAGAATC AAATCAAGTAATGCAGATAAATATGTATTCTGTGATGAGTCTTCTTCAAACAAGGTTGGA GCTGAAACTTTTCTTCAAATGTTGGCTGAGTCGGGTGCTTCCTTACAACATGCATCCAGA AAGTGGGTTACTAATCACTACAGGTGGATAGTCTGGAAACTTGCATGCTACGACATATAC TACCCAGCCAAATGCAGAGGAAACTTTCTAACAATCACCAATGTTCTTGAGGAACTAAAA TACAGATATGAGAGAGAGGTCAATCATGGTCATTGCTCTGCAATCAAGAGGATTCTGAGT GGTGATGCTCCAGCTTCTTCAATGATGGTCCTCTGCATATCAGCTATTAATCCAAGGACC GATAATGGTTCTCAGGAAGCACATTGTTCTGATAATTGCAGCAATGTGAAAGTCGAACTC ACTGATGGGTGGTACTCGATGAATGCTGCTCTGGATGTCGTGCTAACCAAGCAGCTGAAT GCTGGCAAATTGTTTGTGGGGCAGAAGCTTCGAATCCTCGGGGCAGGACTTTCTGGCTGG GCTACCCCAACATCACCACTTGAGGCAGTGATTTCAAGTACAATCTGTTTGTTGTTGAAT ATTAATGGGACATACAGAGCTCACTGGGCGGACCGACTAGGCTTCTGTAAAGAAATTGGT GTCCCTCTGGCTTTCAACTGTATCAAGTGCAATGGGGGTCCAGTGCCTAAAACGCTAGCT GGCATCACACGAATATACCCCATCCTATACAAGGAAAGGTTAGGTGAAAAGAAGTCAATA GTTCGATCAGAGAGAATAGAAAGTAGAATTATACAGCTGCATAATCAGAGGCGCTCAGCT CTTGTTGAGGGTATTATGTGTGAGTACCAGAGAGGAATTAATGGTGTTCACAGCCAAAAC GATACTGACAGCGAAGAAGGAGCCAAGGTCTTTAAGCTGTTAGAGACGGCTGCTGAACCT GAACTTCTTATGGCTGAAATGAGCCTAGAGCAGTTGACATCTTTCACTACATATAAAGCA AAATTTGAGGCAGCCAAGCAAATGCAGATGGAAAAATCAGTGGCAAAAGCTCTGGAAGAC GCTGGTTTAGGTGAAAGGAACGTCACCCCATTCATGAGGATTAGGCTTGTTGGCCTGACG AGCTTAAGTAATGAAGGAGAGCACAATCCAAAAGAAGGCATTGTAACAATCTGGGATCCC ACGGAGAGACAGAGAACCGAGCTGACGGAGGGGAAAATATACATAATGAAAGGGCTAGTA CCAATGAACTCAGATTCAGAAACACTTTACTTACATGCCAGAGGGTCAAGCTCAAGATGG CAGCCTTTGTCTCCAAAAGATTCTGAAAATTTTCAGCCTTTTTTCAACCCTCGTAAACCA ATCTCTTTGTCAAATCTTGGTGAAATTCCTCTGTCAAGTGAATTTGATATCGCTGCGTAC GTTGTATATGTTGGAGATGCATACACAGATGTTCTACAAAAGAAGCAGTGGGTGTTTGTG ACAGATGGATCCACACAACATTCAGGGGAAATCTCAAACAGTCTTCTTGCTATAAGCTTC AGCACCCCATTCATGGATGATAGCTCTGTTTCCCACATCAGCCATAATTTGGTTGGATCC GTGGTCGGATTTTGCAATCTAATTAAAAGAGCAAAGGATGCGACAAACGAAATGTGGGTT GCTGAGACAACAGAGAACTCAGTCTACTTCATAAACGCAGAAGCTGCCTACTCTTCTCAC CTTAAAACCCGCAGTGCCCATATCCAAACATGGGCTAAGCTCTATTCTTCCAAATCCGTC ATCCATGAACTTCGGCAAAGAGTCCTATTTATAATCGGTGCTTGTAAATCACCTTCATGC TGAAGATAAATCATACACCACCTCTTCTCTTTTTTTTTTTTTTTTCACAACACCATTTCT CTTAAGTTTTTGTTTATAAATCTAGCCCTCTGCTGATTGTATCTATTAAAGCCCATTTTG CTACATCAATTTCGTACAAAATAAAAAATCTTTACATTTTGCTAAGTTAAGCTCATGACG CCTGACTATAGGCAAGGGATGTAACAAATTTGGATCCTTATAGCTAGCTAAAATCACCCC GTTATATAATTTATGGGTGATATTCGGCC