Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G40050.1
CDS Infomation	\| signal transducer%2C putative (DUF3550/UPF0682) \| Chr4:18561206-18563727 REVERSE LENGTH=1800 \| 201606
Sequence	ATGGCGGGTGAAGATGTTTCAAGCAATTTCCGAGCTTTGGTGGAGAACGCAGACCGGAAA TTCGCAAGAGTTCGCGATCTTCCGGCGTTTGGAAGAGCACAGAGTCATTACTTCCAAAAG GTGTTCAAAGCTTATATGAAACTATGGAACTATCAGCAATCTCATAGGTCAAAGCTGGTC GAGTCCGGTTTAAACCGATGGGAAATCGGCGAGATCGCGAGCCGGATTGGTCAGCTTTAC TTTAGTCAATACATGAGGACTAGTGAAGCTAGGTTTCTTCTTGAGGCTTTTGTTTTCTAT GAAGCGATTTTGAAAAGGAGCTACTTTGATGAAGCTCAGGGGAAAGATCTTGGTGCTCGA TTTAAGGAGTTACGCTTCTATGCCAGGTTTCTGCTTGTTTCGTTGATTGTTGATCGGAAA CAAATGCTTTTGCACTTAGCTGACAAGCTTAGGCTTTTGGTTGATCACAGCATATCCAAT TTTAGGGAGACAAACTTTAAGGAGTGGAGGCTAGTTGTGCAAGAAATCACTCGCTTTATA GAATCTGATACAAATTTAACTTATCTCAGGCCTCTACGTTACTGTGCAATGCTTGATTCA TATCCAGCTTCTCAAACTTATCTTGCGCGCTTCCACGCTAAGAAATTGTTTAAGTTTCGT GATGCTCTCTTGGCAAGTTATCACCGTAATGAGGTGAAATATGCTGAAGTGACGTTGGAT ACGTATAGAATGATGCAGTGTTTAGAATGGGAACCCAGTGGATCTTTTTACCAAAAAAAG CCTGTTGAAGCCAAGGAGAATGGGTTTGTGGTTGATCATACTTTAACTTCTGGGCTTATA GATATGAACTTGGCTGCTGATATGGCTGATCCATCATTACCTCCTAATCCTAGGAAAGCT ATTCTTTATCGTCCCACAGTATCACACTTACTAGCGGTCTTGGCAATGATTTGTGATGAG CTCTCTCCAGAGACTGTGATGCTGTTATATTTGTCAGCTTCAGGTGGTCCTGCTCGTGAA AATGTTGCGCAACCAGAGAACTCTGTCGGTTCAAGCAGAACATCAAAAAGCAAGCTGCTT GCCCGAGCTTCCCAAGAACAGAAAAGTTACAAGTCAGAACCTCATAGCAATGGAAAACTA ATGTCGGCTGAGTACTATGAAAATCACCTCTGGTTAGGTCCTAGAGGAGGAAGCTCTGGT TCAAACAACCTTTACCCTGGTGACCTAATCCCTTTTACACGGAAACCACTTTTCTTGATC ATTGATAGCGACACTAGCCGTGCATTCAAGGTTTTGGGCGGCGCAGAGAGAGGCGAGCCT GTTGCTATGCTTCTTTCTCCTCTGAAGCCATCATTCGAGAACCCATCTACTGATGATACG GAAGCACTAAATGGAAGTCAGTTTACTTTTTTCTTAACAGCTCCTTTACAAGCATTCTGT CAAATGCTGGGCCTCTCAAACACCAAACCTGACCCTGAATTATGTGATGAAGCAGAGAGC ATACTTTCTGCTTCCTTTTCCGAGTGGGAAACGATTCTCTTGACTTCCAAAGTCTTGAAT CTTGTCTGGGCACAGGTCTTACCTGATCCATTCTTGAGACGGCTGATTCTCAGATTCATA TTCTGCCGGTCTGTACTCACTTCCTTCAGCCGCACAGAGGATGATGACCCGTATTTACCT CAATGCCACCCGAATCTCCCAGAGCTGCTCTCTTCGGTATCTAAACCGGTGCAGTCCTCA GTACAACGACTAGCTGAGCACTTGGGTGTTGCCAAATCTTTCCACTTCACCAACACATAA

Peptide Sequence

PEP ID	AT4G40050.1
PEP Infomation	\| signal transducer%2C putative (DUF3550/UPF0682) \| Chr4:18561206-18563727 REVERSE LENGTH=599 \| 201606
Sequence	MAGEDVSSNFRALVENADRKFARVRDLPAFGRAQSHYFQKVFKAYMKLWNYQQSHRSKLV ESGLNRWEIGEIASRIGQLYFSQYMRTSEARFLLEAFVFYEAILKRSYFDEAQGKDLGAR FKELRFYARFLLVSLIVDRKQMLLHLADKLRLLVDHSISNFRETNFKEWRLVVQEITRFI ESDTNLTYLRPLRYCAMLDSYPASQTYLARFHAKKLFKFRDALLASYHRNEVKYAEVTLD TYRMMQCLEWEPSGSFYQKKPVEAKENGFVVDHTLTSGLIDMNLAADMADPSLPPNPRKA ILYRPTVSHLLAVLAMICDELSPETVMLLYLSASGGPARENVAQPENSVGSSRTSKSKLL ARASQEQKSYKSEPHSNGKLMSAEYYENHLWLGPRGGSSGSNNLYPGDLIPFTRKPLFLI IDSDTSRAFKVLGGAERGEPVAMLLSPLKPSFENPSTDDTEALNGSQFTFFLTAPLQAFC QMLGLSNTKPDPELCDEAESILSASFSEWETILLTSKVLNLVWAQVLPDPFLRRLILRFI FCRSVLTSFSRTEDDDPYLPQCHPNLPELLSSVSKPVQSSVQRLAEHLGVAKSFHFTNT

Transcript Sequence

Transcript ID	AT4G40050.1
Transcript Infomation	\| signal transducer%2C putative (DUF3550/UPF0682) \| Chr4:18560860-18563987 REVERSE LENGTH=2406 \| 201606
Sequence	ATTAATCCCAAGCTTTTTTTCTTCAACTGCTTTTAGAAAGGTGATCATCAACAAAACAAC TCAACGAGGAAAATAATTATAAAAAAACAGAGTGGAAAATAATAAAACAAAGTAAATAAT ATCATATTTATCTCTCTCTCTCTCTCTCCACCGTCGTTTCCCATTGATTAGTTTCTCTCT CTCTCTTTTCCTTTGTCTCCAGAGCCGATGATAAACGACGGCGGTTTTCACCGGAACTGA GGGAAATTAAGCTGGTAAACATGGCGGGTGAAGATGTTTCAAGCAATTTCCGAGCTTTGG TGGAGAACGCAGACCGGAAATTCGCAAGAGTTCGCGATCTTCCGGCGTTTGGAAGAGCAC AGAGTCATTACTTCCAAAAGGTGTTCAAAGCTTATATGAAACTATGGAACTATCAGCAAT CTCATAGGTCAAAGCTGGTCGAGTCCGGTTTAAACCGATGGGAAATCGGCGAGATCGCGA GCCGGATTGGTCAGCTTTACTTTAGTCAATACATGAGGACTAGTGAAGCTAGGTTTCTTC TTGAGGCTTTTGTTTTCTATGAAGCGATTTTGAAAAGGAGCTACTTTGATGAAGCTCAGG GGAAAGATCTTGGTGCTCGATTTAAGGAGTTACGCTTCTATGCCAGGTTTCTGCTTGTTT CGTTGATTGTTGATCGGAAACAAATGCTTTTGCACTTAGCTGACAAGCTTAGGCTTTTGG TTGATCACAGCATATCCAATTTTAGGGAGACAAACTTTAAGGAGTGGAGGCTAGTTGTGC AAGAAATCACTCGCTTTATAGAATCTGATACAAATTTAACTTATCTCAGGCCTCTACGTT ACTGTGCAATGCTTGATTCATATCCAGCTTCTCAAACTTATCTTGCGCGCTTCCACGCTA AGAAATTGTTTAAGTTTCGTGATGCTCTCTTGGCAAGTTATCACCGTAATGAGGTGAAAT ATGCTGAAGTGACGTTGGATACGTATAGAATGATGCAGTGTTTAGAATGGGAACCCAGTG GATCTTTTTACCAAAAAAAGCCTGTTGAAGCCAAGGAGAATGGGTTTGTGGTTGATCATA CTTTAACTTCTGGGCTTATAGATATGAACTTGGCTGCTGATATGGCTGATCCATCATTAC CTCCTAATCCTAGGAAAGCTATTCTTTATCGTCCCACAGTATCACACTTACTAGCGGTCT TGGCAATGATTTGTGATGAGCTCTCTCCAGAGACTGTGATGCTGTTATATTTGTCAGCTT CAGGTGGTCCTGCTCGTGAAAATGTTGCGCAACCAGAGAACTCTGTCGGTTCAAGCAGAA CATCAAAAAGCAAGCTGCTTGCCCGAGCTTCCCAAGAACAGAAAAGTTACAAGTCAGAAC CTCATAGCAATGGAAAACTAATGTCGGCTGAGTACTATGAAAATCACCTCTGGTTAGGTC CTAGAGGAGGAAGCTCTGGTTCAAACAACCTTTACCCTGGTGACCTAATCCCTTTTACAC GGAAACCACTTTTCTTGATCATTGATAGCGACACTAGCCGTGCATTCAAGGTTTTGGGCG GCGCAGAGAGAGGCGAGCCTGTTGCTATGCTTCTTTCTCCTCTGAAGCCATCATTCGAGA ACCCATCTACTGATGATACGGAAGCACTAAATGGAAGTCAGTTTACTTTTTTCTTAACAG CTCCTTTACAAGCATTCTGTCAAATGCTGGGCCTCTCAAACACCAAACCTGACCCTGAAT TATGTGATGAAGCAGAGAGCATACTTTCTGCTTCCTTTTCCGAGTGGGAAACGATTCTCT TGACTTCCAAAGTCTTGAATCTTGTCTGGGCACAGGTCTTACCTGATCCATTCTTGAGAC GGCTGATTCTCAGATTCATATTCTGCCGGTCTGTACTCACTTCCTTCAGCCGCACAGAGG ATGATGACCCGTATTTACCTCAATGCCACCCGAATCTCCCAGAGCTGCTCTCTTCGGTAT CTAAACCGGTGCAGTCCTCAGTACAACGACTAGCTGAGCACTTGGGTGTTGCCAAATCTT TCCACTTCACCAACACATAAAATTAGAAAAATCCATCCCTGTGGTTGAGAGTAGGTTGGT GGGTGAGAGAGTAGGTTGTTTGTTCGTTTTTGTTATAGAAGTTTGTATTTGTTTAGGGTA TAAAGAAAAGAGAGAATTGTAATTTTTATTTTGATTTGATGATTCTTTAGTTTTGTCATA TTTGTAAAAGATTAGAACAAGGTAATAATCATTAGTCTCTTCTTTAGGATGGTTTGCTTT GTGTACGAGGAGAGGTTAACAATATCTGTGCATTGCATTAAAGAAACTAAGAAAGTGTGA CATTGTTCTATCGCTTTTTCATAAACATCTATGTAAGTTTGAGCCAAGAACGAATTAAAG ATTGAA