Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G39952.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr4:18527680-18530007 FORWARD LENGTH=2328 \| 201606
Sequence	ATGTTGCGTCGTCTCTTGAAACCCAATCTTGTTGTTACTCTACGCAAACTCTCTTCTTCT TCCGCAAGCTACGTCGATCGTCATATTAGTGTGATTCTCTGCGATCAGAGCTTGAGCTTA GAGTCTCTGCGCAAACACAACGCTCTTATCATCACCGGAGGACTCTCGGAAAACATCTTC GTCGCATCGAAGCTAATTTCATCTTACGCTTCTTACGGGAAACCCAATTTGTCTTCCAGA GTCTTCCATTTGGTTACTCGAAGAGATATCTTTCTTTGGAATTCTATTATCAAAGCACAT TTCTCCAATGGGGATTATGCTCGATCCTTGTGTTTCTTCTTCTCAATGCTCTTGTCTGGC CAATCCCCTGATCATTTCACTGCTCCCATGGTTGTTTCTGCTTGTGCGGAGCTTTTGTGG TTTCATGTTGGGACTTTCGTTCACGGGCTTGTTTTGAAACATGGAGGTTTTGATAGAAAC ACTGCTGTGGGAGCTTCCTTTGTGTATTTCTACTCAAAGTGTGGGTTTTTACAAGATGCG TGTCTTGTGTTCGACGAAATGCCTGACAGAGATGTTGTTGCTTGGACTGCCATTATATCT GGGCATGTGCAGAACGGCGAGAGCGAGGGAGGTTTGGGTTATCTTTGCAAGATGCATAGT GCTGGTTCTGATGTTGATAAGCCGAATCCCAGAACATTGGAATGCGGATTCCAAGCTTGT TCTAATCTGGGAGCTTTGAAAGAAGGAAGATGTCTTCATGGATTTGCGGTGAAAAATGGT TTAGCTTCTTCCAAGTTTGTCCAGTCTTCCATGTTTTCATTCTATTCGAAATCTGGGAAT CCATCCGAGGCTTATCTTTCTTTCCGTGAACTTGGGGATGAAGATATGTTTTCATGGACT TCGATTATAGCGTCACTGGCGAGATCAGGTGACATGGAGGAAAGTTTTGATATGTTCTGG GAAATGCAGAACAAGGGAATGCACCCAGATGGGGTTGTCATTAGCTGTTTGATTAATGAA CTAGGTAAGATGATGCTTGTCCCTCAGGGTAAAGCCTTTCACGGGTTCGTCATAAGACAT TGTTTCTCTTTAGACAGTACAGTTTGCAATTCCTTGTTATCGATGTACTGCAAATTCGAG CTTCTGTCTGTGGCTGAGAAGCTTTTCTGTAGGATAAGCGAAGAAGGAAACAAAGAAGCT TGGAATACAATGCTTAAAGGCTATGGTAAAATGAAATGTCACGTAAAGTGTATCGAGTTA TTTAGAAAAATTCAGAATCTTGGAATTGAAATCGACTCTGCCAGCGCAACCTCTGTCATA TCTTCTTGTTCCCACATAGGAGCGGTGCTACTAGGGAAGTCGTTGCATTGCTATGTTGTC AAAACTAGCCTGGATCTTACCATCTCAGTGGTCAATTCCCTCATTGATTTGTATGGAAAA ATGGGAGACTTGACTGTAGCTTGGAGGATGTTTTGTGAAGCAGATACTAACGTTATCACT TGGAACGCAATGATTGCGTCTTATGTTCACTGTGAGCAATCCGAAAAAGCCATTGCATTG TTCGATAGAATGGTTTCTGAGAATTTCAAACCCAGCTCAATAACTTTGGTGACTCTGCTT ATGGCTTGTGTCAATACTGGCTCTCTGGAGAGAGGACAGATGATTCATCGGTACATCACT GAAACAGAGCACGAGATGAATCTTTCTCTTTCAGCTGCTCTCATTGACATGTACGCGAAA TGTGGCCACCTTGAAAAGTCACGAGAACTGTTTGATGCTGGAAATCAGAAGGATGCCGTT TGTTGGAATGTGATGATATCAGGTTATGGAATGCACGGAGATGTTGAATCGGCCATAGCA CTTTTTGATCAAATGGAAGAGTCTGATGTTAAACCAACCGGACCTACATTTCTTGCGCTT CTATCGGCTTGCACGCACGCTGGTTTAGTAGAACAAGGGAAAAAACTATTTCTCAAGATG CATCAGTACGATGTGAAACCCAACTTAAAGCATTACTCTTGTCTTGTGGATCTTCTTTCC AGGTCTGGTAATTTGGAGGAAGCTGAAAGCACAGTCATGTCTATGCCATTCTCACCAGAC GGGGTCATATGGGGAACATTGTTGAGCTCATGCATGACCCATGGGGAGTTTGAGATGGGA ATTCGAATGGCAGAACGTGCGGTTGCTAGTGATCCGCAGAACGATGGGTATTATATAATG CTTGCGAACATGTACAGTGCTGCAGGTAAGTGGGAAGAAGCGGAAAGGGCACGAGAGATG ATGAGGGAAAGCGGAGTTGGTAAGAGAGCTGGTCATAGTGTAGTCTAA

Peptide Sequence

PEP ID	AT4G39952.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr4:18527680-18530007 FORWARD LENGTH=775 \| 201606
Sequence	MLRRLLKPNLVVTLRKLSSSSASYVDRHISVILCDQSLSLESLRKHNALIITGGLSENIF VASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSG QSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDA CLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQAC SNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWT SIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRH CFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIEL FRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGK MGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLL MACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAV CWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMG IRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV

Transcript Sequence

Transcript ID	AT4G39952.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr4:18527637-18530274 FORWARD LENGTH=2638 \| 201606
Sequence	TTTGTTATTTAATTACAAAAAGGCCCATTAGAGAAATATTGCAATGTTGCGTCGTCTCTT GAAACCCAATCTTGTTGTTACTCTACGCAAACTCTCTTCTTCTTCCGCAAGCTACGTCGA TCGTCATATTAGTGTGATTCTCTGCGATCAGAGCTTGAGCTTAGAGTCTCTGCGCAAACA CAACGCTCTTATCATCACCGGAGGACTCTCGGAAAACATCTTCGTCGCATCGAAGCTAAT TTCATCTTACGCTTCTTACGGGAAACCCAATTTGTCTTCCAGAGTCTTCCATTTGGTTAC TCGAAGAGATATCTTTCTTTGGAATTCTATTATCAAAGCACATTTCTCCAATGGGGATTA TGCTCGATCCTTGTGTTTCTTCTTCTCAATGCTCTTGTCTGGCCAATCCCCTGATCATTT CACTGCTCCCATGGTTGTTTCTGCTTGTGCGGAGCTTTTGTGGTTTCATGTTGGGACTTT CGTTCACGGGCTTGTTTTGAAACATGGAGGTTTTGATAGAAACACTGCTGTGGGAGCTTC CTTTGTGTATTTCTACTCAAAGTGTGGGTTTTTACAAGATGCGTGTCTTGTGTTCGACGA AATGCCTGACAGAGATGTTGTTGCTTGGACTGCCATTATATCTGGGCATGTGCAGAACGG CGAGAGCGAGGGAGGTTTGGGTTATCTTTGCAAGATGCATAGTGCTGGTTCTGATGTTGA TAAGCCGAATCCCAGAACATTGGAATGCGGATTCCAAGCTTGTTCTAATCTGGGAGCTTT GAAAGAAGGAAGATGTCTTCATGGATTTGCGGTGAAAAATGGTTTAGCTTCTTCCAAGTT TGTCCAGTCTTCCATGTTTTCATTCTATTCGAAATCTGGGAATCCATCCGAGGCTTATCT TTCTTTCCGTGAACTTGGGGATGAAGATATGTTTTCATGGACTTCGATTATAGCGTCACT GGCGAGATCAGGTGACATGGAGGAAAGTTTTGATATGTTCTGGGAAATGCAGAACAAGGG AATGCACCCAGATGGGGTTGTCATTAGCTGTTTGATTAATGAACTAGGTAAGATGATGCT TGTCCCTCAGGGTAAAGCCTTTCACGGGTTCGTCATAAGACATTGTTTCTCTTTAGACAG TACAGTTTGCAATTCCTTGTTATCGATGTACTGCAAATTCGAGCTTCTGTCTGTGGCTGA GAAGCTTTTCTGTAGGATAAGCGAAGAAGGAAACAAAGAAGCTTGGAATACAATGCTTAA AGGCTATGGTAAAATGAAATGTCACGTAAAGTGTATCGAGTTATTTAGAAAAATTCAGAA TCTTGGAATTGAAATCGACTCTGCCAGCGCAACCTCTGTCATATCTTCTTGTTCCCACAT AGGAGCGGTGCTACTAGGGAAGTCGTTGCATTGCTATGTTGTCAAAACTAGCCTGGATCT TACCATCTCAGTGGTCAATTCCCTCATTGATTTGTATGGAAAAATGGGAGACTTGACTGT AGCTTGGAGGATGTTTTGTGAAGCAGATACTAACGTTATCACTTGGAACGCAATGATTGC GTCTTATGTTCACTGTGAGCAATCCGAAAAAGCCATTGCATTGTTCGATAGAATGGTTTC TGAGAATTTCAAACCCAGCTCAATAACTTTGGTGACTCTGCTTATGGCTTGTGTCAATAC TGGCTCTCTGGAGAGAGGACAGATGATTCATCGGTACATCACTGAAACAGAGCACGAGAT GAATCTTTCTCTTTCAGCTGCTCTCATTGACATGTACGCGAAATGTGGCCACCTTGAAAA GTCACGAGAACTGTTTGATGCTGGAAATCAGAAGGATGCCGTTTGTTGGAATGTGATGAT ATCAGGTTATGGAATGCACGGAGATGTTGAATCGGCCATAGCACTTTTTGATCAAATGGA AGAGTCTGATGTTAAACCAACCGGACCTACATTTCTTGCGCTTCTATCGGCTTGCACGCA CGCTGGTTTAGTAGAACAAGGGAAAAAACTATTTCTCAAGATGCATCAGTACGATGTGAA ACCCAACTTAAAGCATTACTCTTGTCTTGTGGATCTTCTTTCCAGGTCTGGTAATTTGGA GGAAGCTGAAAGCACAGTCATGTCTATGCCATTCTCACCAGACGGGGTCATATGGGGAAC ATTGTTGAGCTCATGCATGACCCATGGGGAGTTTGAGATGGGAATTCGAATGGCAGAACG TGCGGTTGCTAGTGATCCGCAGAACGATGGGTATTATATAATGCTTGCGAACATGTACAG TGCTGCAGGTAAGTGGGAAGAAGCGGAAAGGGCACGAGAGATGATGAGGGAAAGCGGAGT TGGTAAGAGAGCTGGTCATAGTGTAGTCTAATAATCTTTGATACAATGAATATCCTTGTG ATTCATCTGTTTGAAACACATGTTCAATGGACAATGATGCATAGATTAGAAGATTAATTA GCTCACCAAATAAGTAAAATTACGAGTCGATTACGACCACTTTAATTTTGGTTACACACA TTGATCATGACTTGTTTTGAAGAAGAAACAATTTACGTAAAGAATAAACAAAAATGGGAG CAGACACGTTTCCTTTCCCTTGGAATATTTTACATAGATTTGCATTCACTGTATCAGA