Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G38030.1
CDS Infomation	\| Rhamnogalacturonate lyase family protein \| Chr4:17863206-17866730 REVERSE LENGTH=2004 \| 201606
Sequence	ATGGTATCGCAGAAGAAGATCGCTTCGTTATTTATTTGTTTCCTTCTGTTGCTTCTTCTT CCACTCTCCTTTTCCAAGCCGACAAGGAACTTAGATGGAATAAGTGCAAGAGCTCCAACA GTGCAGCAGATAAGAAGCAGACATCATGGGACTAGAGAGGTGATAGTGGACAATGGGATA ATCAGAGTCAGTTTCTCGAATCCTCAAGGACTTATAACTGGGATCAAATACAAAGGAATT GATAATGTTCTTCATCCACATCTCCGAGATAGAGGGTACTGGGACATAACATGGCAAGGA ACAAACATTCGCCAAGGCGGCTTAGATCGAATCGAAGGAACAAATTTTAGAATCATCACT CAAACCCAAGAACAAGTGGAGATATCGTTCTCTAGAACATGGGAGGATGGTCATATTCCA TTAAACGTAGACAAGAGGTATATCATACGTAGAAATACTTCAGGAATCTACATGTACGGA ATCTTCGAGAGACTTCCCGAATGGCCAGAACTCGACATGGGTTTAATTCGAATCGCTTTC AAACTCAACCCTGAGAGATTTCATTACATGGCGGTGGCGGATAATCGACAAAGAGAAATG CCAACGGAAGATGACCGTGACATCAAACGTGGTCATGCCAAGGCTCTTGGTTATAAAGAG GCTGTACAATTGACTCATCCTCATAACTCCATGTTCAAAAACCAGGTGGATGATAAGTAC CAGTACACATGTGAGATCAAAGACAACAAAGTGCACGGTTGGATCTCAACCAAGTCCCGT GTCGGCTTTTGGATCATCTCACCAAGCGGTGAATATCGCTCCGGTGGACCGATCAAACAA GAGCTCACGTCTCACGTCGGACCCACGGCCATCACGACTTTTATAAGCGGACATTATGTT GGTGCGGACATGGAGGCACATTACAGACCTGGTGAAGCGTGGAAAAAGGTCTTGGGACCT GTTTTTATTTACTTAAACTCTGATTCTACCAGCAACAATAAGCCTCAAGATTTGTTATGG GAAGATGCTAAACAACAGTCCGAAAAAGAAGTCAAAGCCTGGCCGTACGATTTTGTAGCA TCCTCTGACTATCTTTCTCGTCGAGAAAGAGGAAGCGTCACTGGTCGTCTACTAGTCAAC GACAGATTCTTGACGCCGGGAAAATCTGCATATGTCGGTTTAGCACCGCCGGGAGAAGCT GGTTCGTGGCAGACAAATACTAAGGGATATCAGTTTTGGACCAAGACGAACGAAACCGGT TACTTCACGATAGAAAACGTTAGACCGGGAACTTACAATCTGTATGGATGGGTTCCTGGT TTTATCGGGGACTTTCGATACCAAAACCTTGTTAACGTAGCTGCAGGTTCAGTGATTAGT CTCGGTAGAGTCGTGTACAAGCCACCTAGGAACGGTCCAACGTTATGGGAGATTGGTGTA CCGGATCGAACCGCTCGAGAATACTTTATACCGGAGCCATACAAGGATACAATGAATCCG TTATACCTAAACCACACCGACAAGTTTAGACAGTACGGACTGTGGCAACGATACACAGAG TTATATCCAACTCATGATCTCGTCTACACAGTTGGAGTTAGTAACTATAGCCAAGACTGG TTCTACGCCCAAGTCACAAGGAAAACCGGTGATTTAACGTACGTACCAACAATATGGCAG ATCGTGTTTCATCTTCCATACGTAAACTCGCGAGGCAGCTACACATTGCAGGTAGCTTTA GCCTCGGCTGCATGGGCTAATCTACAAGTTCGGATCAATAACCAAAACTCGTGGCCGTTT TTCTCAACGGGTACTATCGGAAAAGACAATGCTATAGCAAGACATGGAATCCATGGAATG TACCGGCTTTATACCATCGATGTGCCTGGAAGGTTGCTAAGAACCGGGACCAACACGATT TATCTTCGACAGCCTAAAGCACAAGGACCATTTGAAGGTCTTATGTATGATTACATTCGT CTAGAAGAGCCTTCTAGAGCTTAG

Peptide Sequence

PEP ID	AT4G38030.1
PEP Infomation	\| Rhamnogalacturonate lyase family protein \| Chr4:17863206-17866730 REVERSE LENGTH=667 \| 201606
Sequence	MVSQKKIASLFICFLLLLLLPLSFSKPTRNLDGISARAPTVQQIRSRHHGTREVIVDNGI IRVSFSNPQGLITGIKYKGIDNVLHPHLRDRGYWDITWQGTNIRQGGLDRIEGTNFRIIT QTQEQVEISFSRTWEDGHIPLNVDKRYIIRRNTSGIYMYGIFERLPEWPELDMGLIRIAF KLNPERFHYMAVADNRQREMPTEDDRDIKRGHAKALGYKEAVQLTHPHNSMFKNQVDDKY QYTCEIKDNKVHGWISTKSRVGFWIISPSGEYRSGGPIKQELTSHVGPTAITTFISGHYV GADMEAHYRPGEAWKKVLGPVFIYLNSDSTSNNKPQDLLWEDAKQQSEKEVKAWPYDFVA SSDYLSRRERGSVTGRLLVNDRFLTPGKSAYVGLAPPGEAGSWQTNTKGYQFWTKTNETG YFTIENVRPGTYNLYGWVPGFIGDFRYQNLVNVAAGSVISLGRVVYKPPRNGPTLWEIGV PDRTAREYFIPEPYKDTMNPLYLNHTDKFRQYGLWQRYTELYPTHDLVYTVGVSNYSQDW FYAQVTRKTGDLTYVPTIWQIVFHLPYVNSRGSYTLQVALASAAWANLQVRINNQNSWPF FSTGTIGKDNAIARHGIHGMYRLYTIDVPGRLLRTGTNTIYLRQPKAQGPFEGLMYDYIR LEEPSRA

Transcript Sequence

Transcript ID	AT4G38030.1
Transcript Infomation	\| Rhamnogalacturonate lyase family protein \| Chr4:17863073-17866730 REVERSE LENGTH=2137 \| 201606
Sequence	ATGGTATCGCAGAAGAAGATCGCTTCGTTATTTATTTGTTTCCTTCTGTTGCTTCTTCTT CCACTCTCCTTTTCCAAGCCGACAAGGAACTTAGATGGAATAAGTGCAAGAGCTCCAACA GTGCAGCAGATAAGAAGCAGACATCATGGGACTAGAGAGGTGATAGTGGACAATGGGATA ATCAGAGTCAGTTTCTCGAATCCTCAAGGACTTATAACTGGGATCAAATACAAAGGAATT GATAATGTTCTTCATCCACATCTCCGAGATAGAGGGTACTGGGACATAACATGGCAAGGA ACAAACATTCGCCAAGGCGGCTTAGATCGAATCGAAGGAACAAATTTTAGAATCATCACT CAAACCCAAGAACAAGTGGAGATATCGTTCTCTAGAACATGGGAGGATGGTCATATTCCA TTAAACGTAGACAAGAGGTATATCATACGTAGAAATACTTCAGGAATCTACATGTACGGA ATCTTCGAGAGACTTCCCGAATGGCCAGAACTCGACATGGGTTTAATTCGAATCGCTTTC AAACTCAACCCTGAGAGATTTCATTACATGGCGGTGGCGGATAATCGACAAAGAGAAATG CCAACGGAAGATGACCGTGACATCAAACGTGGTCATGCCAAGGCTCTTGGTTATAAAGAG GCTGTACAATTGACTCATCCTCATAACTCCATGTTCAAAAACCAGGTGGATGATAAGTAC CAGTACACATGTGAGATCAAAGACAACAAAGTGCACGGTTGGATCTCAACCAAGTCCCGT GTCGGCTTTTGGATCATCTCACCAAGCGGTGAATATCGCTCCGGTGGACCGATCAAACAA GAGCTCACGTCTCACGTCGGACCCACGGCCATCACGACTTTTATAAGCGGACATTATGTT GGTGCGGACATGGAGGCACATTACAGACCTGGTGAAGCGTGGAAAAAGGTCTTGGGACCT GTTTTTATTTACTTAAACTCTGATTCTACCAGCAACAATAAGCCTCAAGATTTGTTATGG GAAGATGCTAAACAACAGTCCGAAAAAGAAGTCAAAGCCTGGCCGTACGATTTTGTAGCA TCCTCTGACTATCTTTCTCGTCGAGAAAGAGGAAGCGTCACTGGTCGTCTACTAGTCAAC GACAGATTCTTGACGCCGGGAAAATCTGCATATGTCGGTTTAGCACCGCCGGGAGAAGCT GGTTCGTGGCAGACAAATACTAAGGGATATCAGTTTTGGACCAAGACGAACGAAACCGGT TACTTCACGATAGAAAACGTTAGACCGGGAACTTACAATCTGTATGGATGGGTTCCTGGT TTTATCGGGGACTTTCGATACCAAAACCTTGTTAACGTAGCTGCAGGTTCAGTGATTAGT CTCGGTAGAGTCGTGTACAAGCCACCTAGGAACGGTCCAACGTTATGGGAGATTGGTGTA CCGGATCGAACCGCTCGAGAATACTTTATACCGGAGCCATACAAGGATACAATGAATCCG TTATACCTAAACCACACCGACAAGTTTAGACAGTACGGACTGTGGCAACGATACACAGAG TTATATCCAACTCATGATCTCGTCTACACAGTTGGAGTTAGTAACTATAGCCAAGACTGG TTCTACGCCCAAGTCACAAGGAAAACCGGTGATTTAACGTACGTACCAACAATATGGCAG ATCGTGTTTCATCTTCCATACGTAAACTCGCGAGGCAGCTACACATTGCAGGTAGCTTTA GCCTCGGCTGCATGGGCTAATCTACAAGTTCGGATCAATAACCAAAACTCGTGGCCGTTT TTCTCAACGGGTACTATCGGAAAAGACAATGCTATAGCAAGACATGGAATCCATGGAATG TACCGGCTTTATACCATCGATGTGCCTGGAAGGTTGCTAAGAACCGGGACCAACACGATT TATCTTCGACAGCCTAAAGCACAAGGACCATTTGAAGGTCTTATGTATGATTACATTCGT CTAGAAGAGCCTTCTAGAGCTTAGAATCATACAGTATAGTTAGGATTTTTTTTATTTTTT TTTAACACTGTTGTTAGGAAATTGTGTAGATCAAAAAGGGGTTTTGAGATTTACTGACTT TTGATGGATTTATTTATAAAATTGATTTGGATTTTGA