Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G36290.1
CDS Infomation	\| compromized recognition of TCV 1 \| Chr4:17169669-17173187 REVERSE LENGTH=1908 \| 201606
Sequence	ATGGCGAAAAATTACACAGTCGCCGATGTCGTAAATATCGACAGTGACAGTGACAGTGAC GACGACAACGGAGGAGTAATAGGAATGGTTCCGAGCTTGGCATCTCTAATAGAGAATCAG AAAGTTTCGATCGCTGATGCTGCGACGGTGGCTCCTCGAGAAACCCTAGAGTGCCGAAGT TTCTGGAAAGCCGGCGAAAACTTTGTGATCCCTTCAAGTGTTACTCTAACTGCCATAGGT ATGGTTGAGCATGCTCGTGTTCATCCAAAGTTTCTTCACTCGAATGCTACTTCACATAAA TGGGCTTTTGGAGCAATCGCCGAGCTACTTGACAATGCGGTTGATGAGATACAAAACGGT GCTACCGTTGTCAAGATTGATAAGATCAATATTGTTAAAGATAATACACCTGCCTTAGTT TTCCAAGATAATGGTGGTGGGATGGATCCTAATGGGATCAGAAAATGCATGAGCTTAGGC TACTCGTCAAAGAAGTCTAATACGACAATTGGACAATATGGAAATGGTTTCAAGACAAGT ACAATGAGACTTGGAGCTGATGCCATGGTTTTTAGTCGCTCAACTCGTGGAGGCAAATCT ACACAGAGCATTGGTCTTCTGTCCTATACATTCCTTAGGAAAACTGGTCAGGATGATGTG ATCGTTCCTATGATTGATTTCGATATATCCAGTGATAGCCCCCAACCAATTATTTATGGG TCTCCCGGAGATTGGTCTACCAACCTTAACATTCTTCTCAAATGGTCCCCGTTTTCAACA ATGGTCGAACTTTTGCAGCAGTTCGAGGATATTGGAACACATGGAACAAAAGTAATTATA TACAACTTGTGGCTTAATGATGAAGGAATCTATGAGCTGAGTTTTGACGACGATGATGTG GATATACGGCTCCGAGATGAAAATGCCCAGGACGGGAAACGGTTGCACGCTAAAACATTG GAAGTAAGATCTCATATTTCGTACCGCTATCGACATTCTCTAAGGGCTTACATTTCCATG TTATATCTCAAAAAGTTCAAAAACTTCAAAATTATTCTTCGGGGAGTCTCTGTGGCGCAA TTCAACATTGCTGATGAATTCAGACATCCTGAGACAATAATGTACAAACCCCAAGCAGCT GCAGTGGATTATGCTGCCACTGGAATTAAAGTTGGATTCATCAAGGAGGCCCCTAAACTT CCAATTTGTGGTTTCAATGTCTATCACAAAAACCGTCTCATCCGGCCATTCTGGAAGGTC GTTCTGGAAGGGTCAACGAGAGGCAATGGTGTTATGGGAGTTCTTGAGGCAAACTTCATA GAACCAGCCCACGACAAGCAAGATTTTGAGAGGTCTTCTCTATTTCTGCGGCTGGAGGCG AGGCTGAAAAGGATAACCTCTGATTACTGGCAAAATCACTGTCACATTTTCGGATACCAA ACTGCTCAAATCCCTGCAGATAAGTCGAAAAGGACAGTAATACCTGATCAACCGCCTACT GTCAATACATACAATCCTTCGCCTTTGCCTTCTGATAGAATCAGTCATGGTGGTCCTATA ATACGTGAAATCAATCTTAGTAACGCCACTTCAAGCCGAACAGCTGCTGTTGCCGCGCCA CATTTGAGAAATTACACAGGTTTAAGAAATAACTTCCAACCCGTGCAGCTCAACCCACAA CCACCTGCAGCTGGCGATACTGGAAACAACCTCGTTGGCAAGTTAGCGGCTGAGATACGC GAAGAGAACTTACAACTCTTCATGAGGTGCGAGGAATATGTAAAGAAAGAGAATGAAGTA GAACAGACGGTAAAGAGCTTAGAAAAAGAACTGGAAGAAATTAAAAGTAAATGTGCACAA CTTGCTCTGCTTGTGGATGCTAAGAAGAAGGAGATGCAACAAGTTTAG

Peptide Sequence

PEP ID	AT4G36290.1
PEP Infomation	\| compromized recognition of TCV 1 \| Chr4:17169669-17173187 REVERSE LENGTH=635 \| 201606
Sequence	MAKNYTVADVVNIDSDSDSDDDNGGVIGMVPSLASLIENQKVSIADAATVAPRETLECRS FWKAGENFVIPSSVTLTAIGMVEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEIQNG ATVVKIDKINIVKDNTPALVFQDNGGGMDPNGIRKCMSLGYSSKKSNTTIGQYGNGFKTS TMRLGADAMVFSRSTRGGKSTQSIGLLSYTFLRKTGQDDVIVPMIDFDISSDSPQPIIYG SPGDWSTNLNILLKWSPFSTMVELLQQFEDIGTHGTKVIIYNLWLNDEGIYELSFDDDDV DIRLRDENAQDGKRLHAKTLEVRSHISYRYRHSLRAYISMLYLKKFKNFKIILRGVSVAQ FNIADEFRHPETIMYKPQAAAVDYAATGIKVGFIKEAPKLPICGFNVYHKNRLIRPFWKV VLEGSTRGNGVMGVLEANFIEPAHDKQDFERSSLFLRLEARLKRITSDYWQNHCHIFGYQ TAQIPADKSKRTVIPDQPPTVNTYNPSPLPSDRISHGGPIIREINLSNATSSRTAAVAAP HLRNYTGLRNNFQPVQLNPQPPAAGDTGNNLVGKLAAEIREENLQLFMRCEEYVKKENEV EQTVKSLEKELEEIKSKCAQLALLVDAKKKEMQQV

Transcript Sequence

Transcript ID	AT4G36290.1
Transcript Infomation	\| compromized recognition of TCV 1 \| Chr4:17169385-17173361 REVERSE LENGTH=2366 \| 201606
Sequence	TTTTCGCCATAAGAGCAAAGCTATATACAGTATCGGAGATTAAAATTTTCTTACTATTAG TTAAACTGACTCTTAAAGCAAAAGCTCTAGTGATCTGCACACAACGCGTTGTTTTAGTTT CAAATAGGGAAACATCACGCTGTTTTGTTCGAATTCGTTTTGTCGCCGTCGGTAATGGCG AAAAATTACACAGTCGCCGATGTCGTAAATATCGACAGTGACAGTGACAGTGACGACGAC AACGGAGGAGTAATAGGAATGGTTCCGAGCTTGGCATCTCTAATAGAGAATCAGAAAGTT TCGATCGCTGATGCTGCGACGGTGGCTCCTCGAGAAACCCTAGAGTGCCGAAGTTTCTGG AAAGCCGGCGAAAACTTTGTGATCCCTTCAAGTGTTACTCTAACTGCCATAGGTATGGTT GAGCATGCTCGTGTTCATCCAAAGTTTCTTCACTCGAATGCTACTTCACATAAATGGGCT TTTGGAGCAATCGCCGAGCTACTTGACAATGCGGTTGATGAGATACAAAACGGTGCTACC GTTGTCAAGATTGATAAGATCAATATTGTTAAAGATAATACACCTGCCTTAGTTTTCCAA GATAATGGTGGTGGGATGGATCCTAATGGGATCAGAAAATGCATGAGCTTAGGCTACTCG TCAAAGAAGTCTAATACGACAATTGGACAATATGGAAATGGTTTCAAGACAAGTACAATG AGACTTGGAGCTGATGCCATGGTTTTTAGTCGCTCAACTCGTGGAGGCAAATCTACACAG AGCATTGGTCTTCTGTCCTATACATTCCTTAGGAAAACTGGTCAGGATGATGTGATCGTT CCTATGATTGATTTCGATATATCCAGTGATAGCCCCCAACCAATTATTTATGGGTCTCCC GGAGATTGGTCTACCAACCTTAACATTCTTCTCAAATGGTCCCCGTTTTCAACAATGGTC GAACTTTTGCAGCAGTTCGAGGATATTGGAACACATGGAACAAAAGTAATTATATACAAC TTGTGGCTTAATGATGAAGGAATCTATGAGCTGAGTTTTGACGACGATGATGTGGATATA CGGCTCCGAGATGAAAATGCCCAGGACGGGAAACGGTTGCACGCTAAAACATTGGAAGTA AGATCTCATATTTCGTACCGCTATCGACATTCTCTAAGGGCTTACATTTCCATGTTATAT CTCAAAAAGTTCAAAAACTTCAAAATTATTCTTCGGGGAGTCTCTGTGGCGCAATTCAAC ATTGCTGATGAATTCAGACATCCTGAGACAATAATGTACAAACCCCAAGCAGCTGCAGTG GATTATGCTGCCACTGGAATTAAAGTTGGATTCATCAAGGAGGCCCCTAAACTTCCAATT TGTGGTTTCAATGTCTATCACAAAAACCGTCTCATCCGGCCATTCTGGAAGGTCGTTCTG GAAGGGTCAACGAGAGGCAATGGTGTTATGGGAGTTCTTGAGGCAAACTTCATAGAACCA GCCCACGACAAGCAAGATTTTGAGAGGTCTTCTCTATTTCTGCGGCTGGAGGCGAGGCTG AAAAGGATAACCTCTGATTACTGGCAAAATCACTGTCACATTTTCGGATACCAAACTGCT CAAATCCCTGCAGATAAGTCGAAAAGGACAGTAATACCTGATCAACCGCCTACTGTCAAT ACATACAATCCTTCGCCTTTGCCTTCTGATAGAATCAGTCATGGTGGTCCTATAATACGT GAAATCAATCTTAGTAACGCCACTTCAAGCCGAACAGCTGCTGTTGCCGCGCCACATTTG AGAAATTACACAGGTTTAAGAAATAACTTCCAACCCGTGCAGCTCAACCCACAACCACCT GCAGCTGGCGATACTGGAAACAACCTCGTTGGCAAGTTAGCGGCTGAGATACGCGAAGAG AACTTACAACTCTTCATGAGGTGCGAGGAATATGTAAAGAAAGAGAATGAAGTAGAACAG ACGGTAAAGAGCTTAGAAAAAGAACTGGAAGAAATTAAAAGTAAATGTGCACAACTTGCT CTGCTTGTGGATGCTAAGAAGAAGGAGATGCAACAAGTTTAGTAAAAGCGTTACGAGTTA AAACTCTCTGGAACCTAAAAAACCCTAGTTTGATTCAGATTTTTTTGGTGTTCTTGATTT TTGTTTTTCAACTTTCATGGTGTTCTTGTATTTGCTTAATAGCCTGTCATGTGCATATAT GTAACGGTATGTACATAAGCGTATTACTCATATAAACATTTTTGAGAAATGGGCCTATAA GTATTTGAGATATGGAGCCCAATTAGACTGTTGACCCAAAAAAAGAAACGCAAGGCAATG AATAATGATGACGAAGAAGACGTTTG