Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT4G34370.1
CDS Infomation

| RING/U-box superfamily protein | Chr4:16434547-16437037 FORWARD LENGTH=1794 | 201606
Sequence

ATGGATGATTATTTTAGCGCGGAGGAAGAGGCTTGCTATTACTCCTCCGATCAAGATTCT
TTGGATGGAATTGATAATGAAGAGTCTGAATTGCAGCCTCTGTCCTCTAAAAGATCAAAC
ACTCAGGTCATCACTCAGGAATCGCTTCTAGCAGCACAGAGAGAAGATTTGCTAAGGGTG
ATGGAATTGTTATCAATAAAGGAGCACCATGCACGGACTCTTCTTATTCATTACCAGTGG
GATGTGGAGAAGTTGTTTGCTGTGTTTGTTGAGAAAGGAAAAGATAGCTTGTTTTCTGGA
GCTGGTGTCACTGTCTTCGATTATCAATATGGCAACTCTTCCTTTCCTCAGTCTTCACAG
ATGAGTTGTGATGTTTGCATGGAGGATTTACCAGGTGATCACATGACAAGAATGGACTGT
GGCCATTGCTTTTGCAATAATTGTTGGACGGAGCATTTTACTGTGCAGATAAATGAAGGT
CAGAGCAAAAGGATTAGATGCATGGCTCATCAATGTAATGCTATTTGTGATGAAGATATT
GTCAGGAGTCTAGTCAGTAAAAAGCGTCCAGATCTAGCTGCGAAGTTTGATCGTTACCTT
CTTGAGTCGTACATCGAAGATAACAGAATGGTCAAGTGGTGTCCTAGCACTCCGCATTGT
GGGAATGCTATACGAGCTGAGGATGACAAGTTGTGCGAAGTTGAATGTTCTTGTGGTCTT
CAGTTCTGTTTCAGTTGTCTGTGTCAAGCCCACTCCCCTTGCTCTTGTTTGATGTGGGAG
TTATGGAGAAAGAAGTGTCGAGATGAGTCTGAGACAATCAACTGGATAACCGTTCACACA
AAGCTGTGTCCCAAATGTTACAAACCTGTGGAAAAGAATGGTGGATGCAATCTCGTGAGG
TGTATTTGTGGGCAGTGTTTTTGTTGGCTATGTGGTGGAGCTACTGGAAGTGATCACACT
TATAGGAGTATCGCTGGTCACAGTTGTGGTCGGTACCAAGATGACAAAGAGAAGCAGATG
GAAAGAGCGAAGAGAGATTTAAACAGGTATACGCATTATCATCACCGATACAAAGCTCAT
ACAGATTCATCAAAGCTAGAAGATAAACTTAGGGATACTATCCATGAGAAAGTGTCGAAA
TCAGAAAAGAGGGAGTTGAAGCTTAAAGACTTCAGCTGGGTCACCAATGGACTCGACCGG
TTATTCAGATCAAGGCGAGTTCTTTCATATTCGTATGCTTTTGCATATTATATGTTTGGT
GAAGAGATGTTTAAAGATGAGATGACCCCTGAGGAGAGAGAGATAAAGAAGAATTTGTTT
GAGGATCAGCAGCAACAACTTGAAAGTAATGTGGAGAAACTTTCGCAGTTCCTTGAGGAG
CCCTTTGATGAATTTAGTAATGATAAAGTTATGGCGATAAGGATTCAAATCATCAATTTG
TCTGTCGCCGTCGATACACTCTGCAAGAAAATGTACGAGTGCATTGAGAATGACTTACTC
GGATCTCTCCAACTTGGCATCCACAACATCTCACCTTACAGATCGAAGGGAATCGAACAA
GCAGCTCAGTTTTATGCTTCCTGGAATTCCAAAGATGCTGACAAATTCCAACCTTTGGAT
AGTGGTACAAGCGGAGTGACATCGAGGCCTGAGCAAGCTTCAGGATCAAGGAGCTCGGAA
GACACCATTTGCTCATCTTCACAGAAACGTCCCAAAAAAGAAGGAAGTTTCTTAAACAAC
AAAGTCACTTTATTGGATTTGAACTTGCCAGCTGATTTCGTCGACCAGAACTGA

Peptide Sequence

PEP ID

AT4G34370.1
PEP Infomation

| RING/U-box superfamily protein | Chr4:16434547-16437037 FORWARD LENGTH=597 | 201606
Sequence

MDDYFSAEEEACYYSSDQDSLDGIDNEESELQPLSSKRSNTQVITQESLLAAQREDLLRV
MELLSIKEHHARTLLIHYQWDVEKLFAVFVEKGKDSLFSGAGVTVFDYQYGNSSFPQSSQ
MSCDVCMEDLPGDHMTRMDCGHCFCNNCWTEHFTVQINEGQSKRIRCMAHQCNAICDEDI
VRSLVSKKRPDLAAKFDRYLLESYIEDNRMVKWCPSTPHCGNAIRAEDDKLCEVECSCGL
QFCFSCLCQAHSPCSCLMWELWRKKCRDESETINWITVHTKLCPKCYKPVEKNGGCNLVR
CICGQCFCWLCGGATGSDHTYRSIAGHSCGRYQDDKEKQMERAKRDLNRYTHYHHRYKAH
TDSSKLEDKLRDTIHEKVSKSEKRELKLKDFSWVTNGLDRLFRSRRVLSYSYAFAYYMFG
EEMFKDEMTPEEREIKKNLFEDQQQQLESNVEKLSQFLEEPFDEFSNDKVMAIRIQIINL
SVAVDTLCKKMYECIENDLLGSLQLGIHNISPYRSKGIEQAAQFYASWNSKDADKFQPLD
SGTSGVTSRPEQASGSRSSEDTICSSSQKRPKKEGSFLNNKVTLLDLNLPADFVDQN

Transcript Sequence

Transcript ID

AT4G34370.1
Transcript Infomation

| RING/U-box superfamily protein | Chr4:16434302-16437389 FORWARD LENGTH=2391 | 201606
Sequence

AAATGTATCGTTTTGCATAAAAGCAGTAAAAGTGAGAGAGAGAGAGAGACAGATAGGAAT
CTTTGAGCGATTCGTCTTCCTCCTCTATCGCCCTCTACTCTTCACCGGAACTGTGATCTC
ACCGGAATATCCCTCCTTTATTTATCCTCTACTCATCCGTTTTACTCTCTCCCTCCGTCG
ATCTTCTCTTTCTCTTGATCGCCTCCGTCCATTCTTTATCATTTCTTAATTCAGAATTGT
GATCGATGGATGATTATTTTAGCGCGGAGGAAGAGGCTTGCTATTACTCCTCCGATCAAG
ATTCTTTGGATGGAATTGATAATGAAGAGTCTGAATTGCAGCCTCTGTCCTCTAAAAGAT
CAAACACTCAGGTCATCACTCAGGAATCGCTTCTAGCAGCACAGAGAGAAGATTTGCTAA
GGGTGATGGAATTGTTATCAATAAAGGAGCACCATGCACGGACTCTTCTTATTCATTACC
AGTGGGATGTGGAGAAGTTGTTTGCTGTGTTTGTTGAGAAAGGAAAAGATAGCTTGTTTT
CTGGAGCTGGTGTCACTGTCTTCGATTATCAATATGGCAACTCTTCCTTTCCTCAGTCTT
CACAGATGAGTTGTGATGTTTGCATGGAGGATTTACCAGGTGATCACATGACAAGAATGG
ACTGTGGCCATTGCTTTTGCAATAATTGTTGGACGGAGCATTTTACTGTGCAGATAAATG
AAGGTCAGAGCAAAAGGATTAGATGCATGGCTCATCAATGTAATGCTATTTGTGATGAAG
ATATTGTCAGGAGTCTAGTCAGTAAAAAGCGTCCAGATCTAGCTGCGAAGTTTGATCGTT
ACCTTCTTGAGTCGTACATCGAAGATAACAGAATGGTCAAGTGGTGTCCTAGCACTCCGC
ATTGTGGGAATGCTATACGAGCTGAGGATGACAAGTTGTGCGAAGTTGAATGTTCTTGTG
GTCTTCAGTTCTGTTTCAGTTGTCTGTGTCAAGCCCACTCCCCTTGCTCTTGTTTGATGT
GGGAGTTATGGAGAAAGAAGTGTCGAGATGAGTCTGAGACAATCAACTGGATAACCGTTC
ACACAAAGCTGTGTCCCAAATGTTACAAACCTGTGGAAAAGAATGGTGGATGCAATCTCG
TGAGGTGTATTTGTGGGCAGTGTTTTTGTTGGCTATGTGGTGGAGCTACTGGAAGTGATC
ACACTTATAGGAGTATCGCTGGTCACAGTTGTGGTCGGTACCAAGATGACAAAGAGAAGC
AGATGGAAAGAGCGAAGAGAGATTTAAACAGGTATACGCATTATCATCACCGATACAAAG
CTCATACAGATTCATCAAAGCTAGAAGATAAACTTAGGGATACTATCCATGAGAAAGTGT
CGAAATCAGAAAAGAGGGAGTTGAAGCTTAAAGACTTCAGCTGGGTCACCAATGGACTCG
ACCGGTTATTCAGATCAAGGCGAGTTCTTTCATATTCGTATGCTTTTGCATATTATATGT
TTGGTGAAGAGATGTTTAAAGATGAGATGACCCCTGAGGAGAGAGAGATAAAGAAGAATT
TGTTTGAGGATCAGCAGCAACAACTTGAAAGTAATGTGGAGAAACTTTCGCAGTTCCTTG
AGGAGCCCTTTGATGAATTTAGTAATGATAAAGTTATGGCGATAAGGATTCAAATCATCA
ATTTGTCTGTCGCCGTCGATACACTCTGCAAGAAAATGTACGAGTGCATTGAGAATGACT
TACTCGGATCTCTCCAACTTGGCATCCACAACATCTCACCTTACAGATCGAAGGGAATCG
AACAAGCAGCTCAGTTTTATGCTTCCTGGAATTCCAAAGATGCTGACAAATTCCAACCTT
TGGATAGTGGTACAAGCGGAGTGACATCGAGGCCTGAGCAAGCTTCAGGATCAAGGAGCT
CGGAAGACACCATTTGCTCATCTTCACAGAAACGTCCCAAAAAAGAAGGAAGTTTCTTAA
ACAACAAAGTCACTTTATTGGATTTGAACTTGCCAGCTGATTTCGTCGACCAGAACTGAA
CTCAAATCCTCTCTTGCTTAGTCCAAATGAGATATGATGACATAGCAAAAGGTGTTTGAC
TATATATCTATCACCTTCAAGACTCGTGACTCTGGACTGATTAATTTGTCTTTCTTATAG
TTTTTCTGGTTTTCGTACAACTATAATTATGACTACCCCTTACTTTTGCTTCTTTAGTTA
TAGATCTTTAATTCAGCCTCTTTAAACTCTGCTGCTTCTCAATGTCTATGATGTCAAAAG
AGTTATTTTATTAGTAACTAATTTAATAACTAAAAACATTTGTATTTACCGGTATAGCTT
CTAGTTGTTATCTCATTTTCTGATTTGATCCCAAGTATAGAGAAGTAACCC