Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G25540.1
CDS Infomation	\| homolog of DNA mismatch repair protein MSH3 \| Chr4:13042700-13048115 REVERSE LENGTH=3246 \| 201606
Sequence	ATGGGCAAGCAAAAGCAGCAGACGATTTCTCGTTTCTTCGCTCCCAAACCCAAATCCCCG ACTCACGAACCGAATCCGGTAGCCGAATCATCAACACCGCCACCGAAGATATCCGCCACT GTATCCTTCTCTCCTTCCAAGCGTAAGCTTCTCTCCGACCACCTCGCCGCCGCGTCACCC AAAAAGCCTAAACTTTCTCCTCACACTCAAAACCCAGTACCCGATCCCAATTTACACCAA AGATTTCTCCAGAGATTTCTGGAACCCTCGCCGGAGGAATATGTTCCCGAAACGTCATCA TCGAGGAAATACACACCATTGGAACAGCAAGTGGTGGAGCTAAAGAGCAAGTACCCAGAT GTGGTTTTGATGGTGGAAGTTGGTTACAGGTACAGATTCTTCGGAGAAGACGCGGAGATC GCAGCACGCGTGTTGGGTATTTACGCTCATATGGATCACAATTTCATGACGGCGAGTGTG CCAACATTTCGATTGAATTTCCATGTGAGAAGACTGGTGAATGCAGGATACAAGATTGGT GTAGTGAAGCAGACTGAAACTGCAGCCATTAAGTCCCATGGTGCAAACCGGACCGGCCCT TTTTTCCGGGGACTGTCGGCGTTGTATACCAAAGCCACGCTTGAAGCGGCTGAGGATATA AGTGGTGGTTGTGGTGGTGAAGAAGGTTTTGGTTCACAGAGTAATTTCTTGGTTTGTGTT GTGGATGAGAGAGTTAAGTCGGAGACATTAGGCTGTGGTATTGAAATGAGTTTTGATGTT AGAGTCGGTGTTGTTGGCGTTGAAATTTCGACAGGTGAAGTTGTTTATGAAGAGTTCAAT GATAATTTCATGAGAAGTGGATTAGAGGCTGTGATTTTGAGCTTGTCACCAGCTGAGCTG TTGCTTGGCCAGCCTCTTTCACAACAAACTGAGAAGTTTTTGGTGGCACATGCTGGACCT ACCTCAAACGTTCGAGTGGAACGTGCCTCACTGGATTGTTTCAGCAATGGTAATGCAGTA GATGAGGTTATTTCATTATGTGAAAAAATCAGCGCAGGTAACTTAGAAGATGATAAAGAA ATGAAGCTGGAGGCTGCTGAAAAAGGAATGTCTTGCTTGACAGTTCATACAATTATGAAC ATGCCACATCTGACTGTTCAAGCCCTCGCCCTAACGTTTTGCCATCTCAAACAGTTTGGA TTTGAAAGGATCCTTTACCAAGGGGCCTCATTTCGCTCTTTGTCAAGTAACACAGAGATG ACTCTCTCAGCCAATACTCTGCAACAGTTGGAGGTTGTGAAAAATAATTCAGATGGATCG GAATCTGGCTCCTTATTCCATAATATGAATCACACACTTACAGTATATGGTTCCAGGCTT CTTAGACACTGGGTGACTCATCCTCTATGCGATAGAAATTTGATATCTGCTCGGCTTGAT GCTGTTTCTGAGATTTCTGCTTGCATGGGATCTCATAGTTCTTCCCAGCTCAGCAGTGAG TTGGTTGAAGAAGGTTCTGAGAGAGCAATTGTATCACCTGAGTTTTATCTCGTGCTCTCC TCAGTCTTGACAGCTATGTCTAGATCATCTGATATTCAACGTGGAATAACAAGAATCTTT CATCGGACTGCTAAAGCCACAGAGTTCATTGCAGTTATGGAAGCTATTTTACTTGCGGGG AAGCAAATTCAGCGGCTTGGCATAAAGCAAGACTCTGAAATGAGGAGTATGCAATCTGCA ACTGTGCGATCTACTCTTTTGAGAAAATTGATTTCTGTTATTTCATCCCCTGTTGTGGTT GACAATGCCGGAAAACTTCTCTCTGCCCTAAATAAGGAAGCGGCTGTTCGAGGTGACTTG CTCGACATACTAATCACTTCCAGCGACCAATTTCCTGAGCTTGCTGAAGCTCGCCAAGCA GTTTTAGTCATCAGGGAAAAGCTGGATTCCTCGATAGCTTCATTTCGCAAGAAGCTCGCT ATTCGAAATTTGGAATTTCTTCAAGTGTCGGGGATCACACATTTGATAGAGCTGCCCGTT GATTCCAAGGTCCCTATGAATTGGGTGAAAGTAAATAGCACCAAGAAGACTATTCGATAT CATCCCCCAGAAATAGTAGCTGGCTTGGATGAGCTAGCTCTAGCAACTGAACATCTTGCC ATTGTGAACCGAGCTTCGTGGGATAGTTTCCTCAAGAGTTTCAGTAGATACTACACAGAT TTTAAGGCTGCCGTTCAAGCTCTTGCTGCACTGGACTGTTTGCACTCCCTTTCAACTCTA TCTAGAAACAAGAACTATGTCCGTCCCGAGTTTGTGGATGACTGTGAACCAGTTGAGATA AACATACAGTCTGGTCGTCATCCTGTACTGGAGACTATATTACAAGATAACTTCGTCCCA AATGACACAATTTTGCATGCAGAAGGGGAATATTGCCAAATTATCACCGGACCTAACATG GGAGGAAAGAGCTGCTATATCCGTCAAGTTGCTTTAATTTCCATAATGGCTCAGGTTGGT TCCTTTGTACCAGCGTCATTCGCCAAGCTGCACGTGCTTGATGGTGTTTTCACTCGGATG GGTGCTTCAGACAGTATCCAGCATGGCAGAAGTACCTTTCTAGAAGAATTAAGTGAAGCG TCACACATAATCAGAACCTGTTCTTCTCGTTCGCTTGTTATATTAGATGAGCTTGGAAGA GGCACTAGCACACACGACGGTGTAGCCATTGCCTATGCAACATTACAGCATCTCCTAGCA GAAAAGAGATGTTTGGTTCTTTTTGTCACGCATTACCCTGAAATAGCTGAGATCAGTAAC GGATTCCCAGGTTCTGTTGGGACATACCATGTCTCGTATCTGACATTGCAGAAGGATAAA GGCAGTTATGATCATGATGATGTGACCTACCTATATAAGCTTGTGCGTGGTCTTTGCAGC AGGAGCTTTGGTTTTAAGGTTGCTCAGCTTGCCCAGATACCTCCATCATGTATACGTCGA GCCATTTCAATGGCTGCAAAATTGGAAGCTGAGGTACGTGCAAGAGAGAGAAATACACGC ATGGGAGAACCAGAAGGACATGAAGAACCGAGAGGCGCAGAAGAATCTATTTCGGCTCTA GGTGACTTGTTTGCAGACCTGAAATTTGCTCTCTCTGAAGAGGACCCTTGGAAAGCATTC GAGTTTTTAAAGCATGCTTGGAAGATTGCTGGCAAAATCAGACTAAAACCAACTTGTTCA TTTTGA

Peptide Sequence

PEP ID	AT4G25540.1
PEP Infomation	\| homolog of DNA mismatch repair protein MSH3 \| Chr4:13042700-13048115 REVERSE LENGTH=1081 \| 201606
Sequence	MGKQKQQTISRFFAPKPKSPTHEPNPVAESSTPPPKISATVSFSPSKRKLLSDHLAAASP KKPKLSPHTQNPVPDPNLHQRFLQRFLEPSPEEYVPETSSSRKYTPLEQQVVELKSKYPD VVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVPTFRLNFHVRRLVNAGYKIG VVKQTETAAIKSHGANRTGPFFRGLSALYTKATLEAAEDISGGCGGEEGFGSQSNFLVCV VDERVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYEEFNDNFMRSGLEAVILSLSPAEL LLGQPLSQQTEKFLVAHAGPTSNVRVERASLDCFSNGNAVDEVISLCEKISAGNLEDDKE MKLEAAEKGMSCLTVHTIMNMPHLTVQALALTFCHLKQFGFERILYQGASFRSLSSNTEM TLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDRNLISARLD AVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITRIF HRTAKATEFIAVMEAILLAGKQIQRLGIKQDSEMRSMQSATVRSTLLRKLISVISSPVVV DNAGKLLSALNKEAAVRGDLLDILITSSDQFPELAEARQAVLVIREKLDSSIASFRKKLA IRNLEFLQVSGITHLIELPVDSKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHLA IVNRASWDSFLKSFSRYYTDFKAAVQALAALDCLHSLSTLSRNKNYVRPEFVDDCEPVEI NIQSGRHPVLETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVG SFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGR GTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKDK GSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLEAEVRARERNTR MGEPEGHEEPRGAEESISALGDLFADLKFALSEEDPWKAFEFLKHAWKIAGKIRLKPTCS F

Transcript Sequence

Transcript ID	AT4G25540.1
Transcript Infomation	\| homolog of DNA mismatch repair protein MSH3 \| Chr4:13042455-13048262 REVERSE LENGTH=3638 \| 201606
Sequence	TCGTCACTTTGTTGTTCAGTGACAGTGATGGATTAGAGAGATTGGCAACCTAAGAAAGCG CGCGAAAATTGGCAACCCAAGTTCGCCATAGCCACGACCACGACCTTCCATTTCTCTTAA ACGGAGGAGATTACGAATAAAGCAATTATGGGCAAGCAAAAGCAGCAGACGATTTCTCGT TTCTTCGCTCCCAAACCCAAATCCCCGACTCACGAACCGAATCCGGTAGCCGAATCATCA ACACCGCCACCGAAGATATCCGCCACTGTATCCTTCTCTCCTTCCAAGCGTAAGCTTCTC TCCGACCACCTCGCCGCCGCGTCACCCAAAAAGCCTAAACTTTCTCCTCACACTCAAAAC CCAGTACCCGATCCCAATTTACACCAAAGATTTCTCCAGAGATTTCTGGAACCCTCGCCG GAGGAATATGTTCCCGAAACGTCATCATCGAGGAAATACACACCATTGGAACAGCAAGTG GTGGAGCTAAAGAGCAAGTACCCAGATGTGGTTTTGATGGTGGAAGTTGGTTACAGGTAC AGATTCTTCGGAGAAGACGCGGAGATCGCAGCACGCGTGTTGGGTATTTACGCTCATATG GATCACAATTTCATGACGGCGAGTGTGCCAACATTTCGATTGAATTTCCATGTGAGAAGA CTGGTGAATGCAGGATACAAGATTGGTGTAGTGAAGCAGACTGAAACTGCAGCCATTAAG TCCCATGGTGCAAACCGGACCGGCCCTTTTTTCCGGGGACTGTCGGCGTTGTATACCAAA GCCACGCTTGAAGCGGCTGAGGATATAAGTGGTGGTTGTGGTGGTGAAGAAGGTTTTGGT TCACAGAGTAATTTCTTGGTTTGTGTTGTGGATGAGAGAGTTAAGTCGGAGACATTAGGC TGTGGTATTGAAATGAGTTTTGATGTTAGAGTCGGTGTTGTTGGCGTTGAAATTTCGACA GGTGAAGTTGTTTATGAAGAGTTCAATGATAATTTCATGAGAAGTGGATTAGAGGCTGTG ATTTTGAGCTTGTCACCAGCTGAGCTGTTGCTTGGCCAGCCTCTTTCACAACAAACTGAG AAGTTTTTGGTGGCACATGCTGGACCTACCTCAAACGTTCGAGTGGAACGTGCCTCACTG GATTGTTTCAGCAATGGTAATGCAGTAGATGAGGTTATTTCATTATGTGAAAAAATCAGC GCAGGTAACTTAGAAGATGATAAAGAAATGAAGCTGGAGGCTGCTGAAAAAGGAATGTCT TGCTTGACAGTTCATACAATTATGAACATGCCACATCTGACTGTTCAAGCCCTCGCCCTA ACGTTTTGCCATCTCAAACAGTTTGGATTTGAAAGGATCCTTTACCAAGGGGCCTCATTT CGCTCTTTGTCAAGTAACACAGAGATGACTCTCTCAGCCAATACTCTGCAACAGTTGGAG GTTGTGAAAAATAATTCAGATGGATCGGAATCTGGCTCCTTATTCCATAATATGAATCAC ACACTTACAGTATATGGTTCCAGGCTTCTTAGACACTGGGTGACTCATCCTCTATGCGAT AGAAATTTGATATCTGCTCGGCTTGATGCTGTTTCTGAGATTTCTGCTTGCATGGGATCT CATAGTTCTTCCCAGCTCAGCAGTGAGTTGGTTGAAGAAGGTTCTGAGAGAGCAATTGTA TCACCTGAGTTTTATCTCGTGCTCTCCTCAGTCTTGACAGCTATGTCTAGATCATCTGAT ATTCAACGTGGAATAACAAGAATCTTTCATCGGACTGCTAAAGCCACAGAGTTCATTGCA GTTATGGAAGCTATTTTACTTGCGGGGAAGCAAATTCAGCGGCTTGGCATAAAGCAAGAC TCTGAAATGAGGAGTATGCAATCTGCAACTGTGCGATCTACTCTTTTGAGAAAATTGATT TCTGTTATTTCATCCCCTGTTGTGGTTGACAATGCCGGAAAACTTCTCTCTGCCCTAAAT AAGGAAGCGGCTGTTCGAGGTGACTTGCTCGACATACTAATCACTTCCAGCGACCAATTT CCTGAGCTTGCTGAAGCTCGCCAAGCAGTTTTAGTCATCAGGGAAAAGCTGGATTCCTCG ATAGCTTCATTTCGCAAGAAGCTCGCTATTCGAAATTTGGAATTTCTTCAAGTGTCGGGG ATCACACATTTGATAGAGCTGCCCGTTGATTCCAAGGTCCCTATGAATTGGGTGAAAGTA AATAGCACCAAGAAGACTATTCGATATCATCCCCCAGAAATAGTAGCTGGCTTGGATGAG CTAGCTCTAGCAACTGAACATCTTGCCATTGTGAACCGAGCTTCGTGGGATAGTTTCCTC AAGAGTTTCAGTAGATACTACACAGATTTTAAGGCTGCCGTTCAAGCTCTTGCTGCACTG GACTGTTTGCACTCCCTTTCAACTCTATCTAGAAACAAGAACTATGTCCGTCCCGAGTTT GTGGATGACTGTGAACCAGTTGAGATAAACATACAGTCTGGTCGTCATCCTGTACTGGAG ACTATATTACAAGATAACTTCGTCCCAAATGACACAATTTTGCATGCAGAAGGGGAATAT TGCCAAATTATCACCGGACCTAACATGGGAGGAAAGAGCTGCTATATCCGTCAAGTTGCT TTAATTTCCATAATGGCTCAGGTTGGTTCCTTTGTACCAGCGTCATTCGCCAAGCTGCAC GTGCTTGATGGTGTTTTCACTCGGATGGGTGCTTCAGACAGTATCCAGCATGGCAGAAGT ACCTTTCTAGAAGAATTAAGTGAAGCGTCACACATAATCAGAACCTGTTCTTCTCGTTCG CTTGTTATATTAGATGAGCTTGGAAGAGGCACTAGCACACACGACGGTGTAGCCATTGCC TATGCAACATTACAGCATCTCCTAGCAGAAAAGAGATGTTTGGTTCTTTTTGTCACGCAT TACCCTGAAATAGCTGAGATCAGTAACGGATTCCCAGGTTCTGTTGGGACATACCATGTC TCGTATCTGACATTGCAGAAGGATAAAGGCAGTTATGATCATGATGATGTGACCTACCTA TATAAGCTTGTGCGTGGTCTTTGCAGCAGGAGCTTTGGTTTTAAGGTTGCTCAGCTTGCC CAGATACCTCCATCATGTATACGTCGAGCCATTTCAATGGCTGCAAAATTGGAAGCTGAG GTACGTGCAAGAGAGAGAAATACACGCATGGGAGAACCAGAAGGACATGAAGAACCGAGA GGCGCAGAAGAATCTATTTCGGCTCTAGGTGACTTGTTTGCAGACCTGAAATTTGCTCTC TCTGAAGAGGACCCTTGGAAAGCATTCGAGTTTTTAAAGCATGCTTGGAAGATTGCTGGC AAAATCAGACTAAAACCAACTTGTTCATTTTGATTTAATCTTAACATTATAGCAACTGCA AGGTCTTGATCATCTGTTAGTTGCGTACTAACTTATGTGTATTAGTATAACAAGAAAAGA GAATTAGAGAGATGGATTCTAATCCGGTGTTGCAGTACATCTTTTCTCCACCCGCAACCC TGTTTCTTTTCAGCTTGATTTCTAGTAGTTATTAGAATTCTGGAATGCATTTTTCACCTG ATATAGTGAAGCATGATCTCCATCAATGTTGAATACGA