Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G24560.1
CDS Infomation	\| ubiquitin-specific protease 16 \| Chr4:12679493-12684528 REVERSE LENGTH=3027 \| 201606
Sequence	ATGCTCCTTGTTTTGGATCTAGGGATTTCTAGTCTAGTCCTTGTGGTCTCTCTTGTTTTA CCTTTGATCGGTCTCTTTGTTCGTCACAAATGGAGGGTCGCTGCCCAAAGAAGGGAGGAG ATTAGAAGACTTCTTATTCATGCTTCTGAAGAGGCTGCCAGGGCTGAGCTAGAGGCCTCT GTTGAGTTCTCTTCTGTTGCCGTCTCTAATGTCTTCCATTGTCCTGTTTGCTATTGTCTT GCCACGACTCGTTGCTCTCGCTGCAAAGCCGTTCGATATTGTTCCGGGAAATGTCAAATC ATTCACTGGCGGCAAGGTCACAAAGATGAATGTCATCCTGCTTCCATTGTATATGATAGT GAAGATGAGAGTGATTCCGATTTGAGATTAGGAGAAGAAAATGGACAAAATACTCCTGAG GAAACTTTACTGGTGGGTCCAGAACCAGTTACTATACCAATCGGGGAATCACTATTATCT AATCGTGCCAGATCTCCTGAAGATGGGAATGGAGATATTGCAGATAACAAAGATGACCTT ATAGATAAGGAAGAAGCTGTTTCTGTTGCTGAAACATCTGGATCCTCGTTTTCTGGCTTC TCCTCCTCCCCCCGTAATGACTCTGGCGACGAGATTTCTCGTTGTGAGAGCTTCAGTTCA TCTGAATCCGAGAGATCAGAGTCCCTACTTGATGCTCATGTCTCTGTAGAGCCAGAAGAC ACCTGTTTCAGCACCATTGAAGATGCTCCATCCAAACTGTTGTCTCCAAAATTTGTGCAC TTGGTTGAATCTGTAGATAATCTCGCTAATCTGCCTAAATTAAGTGTACATAAACCTGAG GATGATGCTGGGCAGAACCAGAGCCAATCAAGGAGCTTACACTCATTAGTTACGGATAGG CATCCAGTATCAGCTGACCCATCTCTGAAGTCATCTGATTTTTGGGGTACGGCTCTTGGA TCAGCCGAACGTGTGAGTGATTCTTGTGTTAAATCTAAATCTGGTAGACCTGGTAACTCC TCTCTGCATTTCTCCTTTGGCTCTGGCTCCTCTAGAGACACCTCAGCTGCTAAAGTTTCT GAGCAGAGGAGTAGCATTTTAAAAGAAGCTCCTAGGGGGACTGGTTATATATCTGATGGA GTAAACTTAAGAGAAAGAAATGCTAAAAGATTTGATGAAGCTGAAATTGCATTACCAATT TCCTCTTCTACTGATGCGCTGAGTCCTTTGGACTCTTCTAATTTGTCCCATGTGACCCTT CCGAAGTCAAAGAGCGCTAGTAGTGAAAATGGCTCTATGTTGGCCCCTTTGAAGGTTGGG GAAGTCCAACTTTTGGCATCCAAGGCCTCGAATACCAAGAAGTGTGCTGATCTTATGAAG CATTCTCCTTTAGGTGCAAAATCGGTAAGAGTTCTTGATCATCAGAAACAGAATGGTGCT GTCGTTCAGCATATAAATTCTCTACATGGAAGAAGTGGTTTAAAGGCATCAGTACTGAAA GTTGTAGACCAGTGGACCAGACCGAAGTCTGAAAATGAGATGGCAGGAAGACATGGTCAT AAGGGGCTCTTTCCATATGAAGTCTTTGCTAAACTGTATACATATAAAATTGAGTTCCAG CCTTGTGGCCTCATCAACGTTGGCAATAGCTGCTTTGCTAATGTTGTCTTTCAATGCCTT ATGTTCACTCCTCCTCTGACGACATACTTCCTCCAGCAATTTCATTCCAGAGCATGTACA AAAAAAGAACAGTGCTTCACCTGTGGGTTTGAGAAGCTGGTCGTAAAGGCAAAAGAAGAG AAGTCTCCACTGTCCCCTAATGGCTTGCTATCTCAGCTGCAGAATATTGGAATCTTTCTT GGGAATGGCAAGGAAGAAGATGCACATGAATTCCTTAGGTTTGTTGTCGATACAATGCAG TCTGTGTGCATTAAGGCATCTGAATATGATATGACCAAGAGTAGCAAATTAGAAGATACA ACTCTTATTGGTTTGACATTTGGGGGATACCTCCGGTCAAAGATTAAATGCATGAAATGT CAAGTAAAATCTGAGCTGCGTGAGAAAATGATGGATCTAACGGTTGAGATTGATGGAGAT ATTAGCACCCTGGATGATGCTTTGCGTCGATTTACAAGGACTGAGATATTGGATGGAGAG AACAAATACAGATGTGGCAGCTGTAAATCCTATGAGAGAGCCAAAAAGAAGCTGAAAATA ACAGAGCCTCCGAATGTCCTTACCATTGCACTAAAACGATTCCAGGCAGGGAAATTCGGG AAGCTCAATAAGTTGATTAGGTTTCCAGAAACTCTAGATTTGGCTCCATATGTCAGTGGG GGAAGTGAAAAATCACATGACTACAAACTCTATGGAGTTATTGTTCACTTGGATGTAATG AATGCAGCATTTTCTGGCCATTATGTCTGCTATATTAGAAACCAAAATAAGTGGTACAAG GCTGATGATAGCACGGTAGTAACTTCGGATGTGGAAAGGATCTTGACAAAGGGAGCGTAT ATGTTGTTCTACGCAAGGTGCACTCCAACGCCTCCAAGATTAGCAGTATGTACCAAAACT GAAGCATCCAATAAAAAAAGCAGAGTGCCACTACCTAAGGCTAATGAGAAAAGTACCATA TCCCGGTCTGTGTCTACTTCAAGTCCTGAGTTGTCTTCCAACACGCCTGGTGGTGGTCGA TCCGGCAATATACAGTCATTTTATTCTAGTTTCCAGAGGCTGCAGAAGATTTTAGAAGAA GACTCGGCGAGTGACAGTTCATCTCTCTTTGACAGCAACTCAGATGAATGCTCTTGTAGC ACAGACAGTACAAGCATGGACGACTTTGCTGATTTCATTTTTGGAGATCATCAGGGACGG GCTCACGGACAGTCTGAGACTCCCTCACCAACATCATCGTCTTCCTCATCTTCTCCCCCC TTCACAAGGCGTTCGCCGCTCAGTCGTTCTTCTCCAGAAACTTACGGAACCTCAAGACAT CAGTTGCCCTTGGGAGGAGAAAGGTAA

Peptide Sequence

PEP ID	AT4G24560.1
PEP Infomation	\| ubiquitin-specific protease 16 \| Chr4:12679493-12684528 REVERSE LENGTH=1008 \| 201606
Sequence	MLLVLDLGISSLVLVVSLVLPLIGLFVRHKWRVAAQRREEIRRLLIHASEEAARAELEAS VEFSSVAVSNVFHCPVCYCLATTRCSRCKAVRYCSGKCQIIHWRQGHKDECHPASIVYDS EDESDSDLRLGEENGQNTPEETLLVGPEPVTIPIGESLLSNRARSPEDGNGDIADNKDDL IDKEEAVSVAETSGSSFSGFSSSPRNDSGDEISRCESFSSSESERSESLLDAHVSVEPED TCFSTIEDAPSKLLSPKFVHLVESVDNLANLPKLSVHKPEDDAGQNQSQSRSLHSLVTDR HPVSADPSLKSSDFWGTALGSAERVSDSCVKSKSGRPGNSSLHFSFGSGSSRDTSAAKVS EQRSSILKEAPRGTGYISDGVNLRERNAKRFDEAEIALPISSSTDALSPLDSSNLSHVTL PKSKSASSENGSMLAPLKVGEVQLLASKASNTKKCADLMKHSPLGAKSVRVLDHQKQNGA VVQHINSLHGRSGLKASVLKVVDQWTRPKSENEMAGRHGHKGLFPYEVFAKLYTYKIEFQ PCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFEKLVVKAKEE KSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMTKSSKLEDT TLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILDGE NKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKFGKLNKLIRFPETLDLAPYVSG GSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRNQNKWYKADDSTVVTSDVERILTKGAY MLFYARCTPTPPRLAVCTKTEASNKKSRVPLPKANEKSTISRSVSTSSPELSSNTPGGGR SGNIQSFYSSFQRLQKILEEDSASDSSSLFDSNSDECSCSTDSTSMDDFADFIFGDHQGR AHGQSETPSPTSSSSSSSPPFTRRSPLSRSSPETYGTSRHQLPLGGER

Transcript Sequence

Transcript ID	AT4G24560.1
Transcript Infomation	\| ubiquitin-specific protease 16 \| Chr4:12679200-12684976 REVERSE LENGTH=3768 \| 201606
Sequence	CAAAAAAAAAAAAAGGTTGTCTGGTCTGGTAAAATGAAAAAGCAAAGCGTCTTGGTATAG AAAAGTAATATACTGCCTCCTAATTTCTTCGTCCTTCTACCGAAGAATCTCTCCACTCTT GCCCTCTTTCGAAACCCTAAACCAGAAGCACCAGATTTTTTCAACTTTTTCCCAGAGAAC AATAGAAAACCCAACTTGTGCTCTCTAGGGTTTTCTTTATTCCTTCTCATCTTTGGATTT TCTTGGGTCATCATTTTGGAAGCTTACCCACCAGCGAAAAAATTATAACTTCCATCGATT CCTGGCTTCTCTCTCTCGCTCTCTCTGCATGTGCTAAATCGCCGGACTGATCCTCACTGT CACCTCTGTTCCCGGCTTATTCGCCGGTGAAATCTATGGTTGGTGCTCAGATTTATTTCC AATTGTTTGTGCATCTGGTGGAGGATAAATGCTCCTTGTTTTGGATCTAGGGATTTCTAG TCTAGTCCTTGTGGTCTCTCTTGTTTTACCTTTGATCGGTCTCTTTGTTCGTCACAAATG GAGGGTCGCTGCCCAAAGAAGGGAGGAGATTAGAAGACTTCTTATTCATGCTTCTGAAGA GGCTGCCAGGGCTGAGCTAGAGGCCTCTGTTGAGTTCTCTTCTGTTGCCGTCTCTAATGT CTTCCATTGTCCTGTTTGCTATTGTCTTGCCACGACTCGTTGCTCTCGCTGCAAAGCCGT TCGATATTGTTCCGGGAAATGTCAAATCATTCACTGGCGGCAAGGTCACAAAGATGAATG TCATCCTGCTTCCATTGTATATGATAGTGAAGATGAGAGTGATTCCGATTTGAGATTAGG AGAAGAAAATGGACAAAATACTCCTGAGGAAACTTTACTGGTGGGTCCAGAACCAGTTAC TATACCAATCGGGGAATCACTATTATCTAATCGTGCCAGATCTCCTGAAGATGGGAATGG AGATATTGCAGATAACAAAGATGACCTTATAGATAAGGAAGAAGCTGTTTCTGTTGCTGA AACATCTGGATCCTCGTTTTCTGGCTTCTCCTCCTCCCCCCGTAATGACTCTGGCGACGA GATTTCTCGTTGTGAGAGCTTCAGTTCATCTGAATCCGAGAGATCAGAGTCCCTACTTGA TGCTCATGTCTCTGTAGAGCCAGAAGACACCTGTTTCAGCACCATTGAAGATGCTCCATC CAAACTGTTGTCTCCAAAATTTGTGCACTTGGTTGAATCTGTAGATAATCTCGCTAATCT GCCTAAATTAAGTGTACATAAACCTGAGGATGATGCTGGGCAGAACCAGAGCCAATCAAG GAGCTTACACTCATTAGTTACGGATAGGCATCCAGTATCAGCTGACCCATCTCTGAAGTC ATCTGATTTTTGGGGTACGGCTCTTGGATCAGCCGAACGTGTGAGTGATTCTTGTGTTAA ATCTAAATCTGGTAGACCTGGTAACTCCTCTCTGCATTTCTCCTTTGGCTCTGGCTCCTC TAGAGACACCTCAGCTGCTAAAGTTTCTGAGCAGAGGAGTAGCATTTTAAAAGAAGCTCC TAGGGGGACTGGTTATATATCTGATGGAGTAAACTTAAGAGAAAGAAATGCTAAAAGATT TGATGAAGCTGAAATTGCATTACCAATTTCCTCTTCTACTGATGCGCTGAGTCCTTTGGA CTCTTCTAATTTGTCCCATGTGACCCTTCCGAAGTCAAAGAGCGCTAGTAGTGAAAATGG CTCTATGTTGGCCCCTTTGAAGGTTGGGGAAGTCCAACTTTTGGCATCCAAGGCCTCGAA TACCAAGAAGTGTGCTGATCTTATGAAGCATTCTCCTTTAGGTGCAAAATCGGTAAGAGT TCTTGATCATCAGAAACAGAATGGTGCTGTCGTTCAGCATATAAATTCTCTACATGGAAG AAGTGGTTTAAAGGCATCAGTACTGAAAGTTGTAGACCAGTGGACCAGACCGAAGTCTGA AAATGAGATGGCAGGAAGACATGGTCATAAGGGGCTCTTTCCATATGAAGTCTTTGCTAA ACTGTATACATATAAAATTGAGTTCCAGCCTTGTGGCCTCATCAACGTTGGCAATAGCTG CTTTGCTAATGTTGTCTTTCAATGCCTTATGTTCACTCCTCCTCTGACGACATACTTCCT CCAGCAATTTCATTCCAGAGCATGTACAAAAAAAGAACAGTGCTTCACCTGTGGGTTTGA GAAGCTGGTCGTAAAGGCAAAAGAAGAGAAGTCTCCACTGTCCCCTAATGGCTTGCTATC TCAGCTGCAGAATATTGGAATCTTTCTTGGGAATGGCAAGGAAGAAGATGCACATGAATT CCTTAGGTTTGTTGTCGATACAATGCAGTCTGTGTGCATTAAGGCATCTGAATATGATAT GACCAAGAGTAGCAAATTAGAAGATACAACTCTTATTGGTTTGACATTTGGGGGATACCT CCGGTCAAAGATTAAATGCATGAAATGTCAAGTAAAATCTGAGCTGCGTGAGAAAATGAT GGATCTAACGGTTGAGATTGATGGAGATATTAGCACCCTGGATGATGCTTTGCGTCGATT TACAAGGACTGAGATATTGGATGGAGAGAACAAATACAGATGTGGCAGCTGTAAATCCTA TGAGAGAGCCAAAAAGAAGCTGAAAATAACAGAGCCTCCGAATGTCCTTACCATTGCACT AAAACGATTCCAGGCAGGGAAATTCGGGAAGCTCAATAAGTTGATTAGGTTTCCAGAAAC TCTAGATTTGGCTCCATATGTCAGTGGGGGAAGTGAAAAATCACATGACTACAAACTCTA TGGAGTTATTGTTCACTTGGATGTAATGAATGCAGCATTTTCTGGCCATTATGTCTGCTA TATTAGAAACCAAAATAAGTGGTACAAGGCTGATGATAGCACGGTAGTAACTTCGGATGT GGAAAGGATCTTGACAAAGGGAGCGTATATGTTGTTCTACGCAAGGTGCACTCCAACGCC TCCAAGATTAGCAGTATGTACCAAAACTGAAGCATCCAATAAAAAAAGCAGAGTGCCACT ACCTAAGGCTAATGAGAAAAGTACCATATCCCGGTCTGTGTCTACTTCAAGTCCTGAGTT GTCTTCCAACACGCCTGGTGGTGGTCGATCCGGCAATATACAGTCATTTTATTCTAGTTT CCAGAGGCTGCAGAAGATTTTAGAAGAAGACTCGGCGAGTGACAGTTCATCTCTCTTTGA CAGCAACTCAGATGAATGCTCTTGTAGCACAGACAGTACAAGCATGGACGACTTTGCTGA TTTCATTTTTGGAGATCATCAGGGACGGGCTCACGGACAGTCTGAGACTCCCTCACCAAC ATCATCGTCTTCCTCATCTTCTCCCCCCTTCACAAGGCGTTCGCCGCTCAGTCGTTCTTC TCCAGAAACTTACGGAACCTCAAGACATCAGTTGCCCTTGGGAGGAGAAAGGTAAGGGAA ACAAGATGGTTTTTTGTCCACTTGGCCCCAACTAAGTCAAAAGTAGTAGAAGAAAGTAGA TTTGATTACACGTAGATTGAGTGGTTTTATTAACAACCCGTATTTAGGCTTGGTGAAAGT GGTTAATGAGAGAAGTGGTGGTATATAGTAGTGTATAGTGGGGAAGAGAGTTTTTGCCCA TGAAATTGTATCACGTAATGGAACGGAATTTACCTTTGTTAATAAGTTGTTTTGACTTTT ATTATAATCAATCAATAAAGCTAATCTAATATTGTCTCATCGTTGCAC