Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G24430.1
CDS Infomation	\| Rhamnogalacturonate lyase family protein \| Chr4:12630018-12632975 FORWARD LENGTH=1941 \| 201606
Sequence	ATGTCGAACCAAGATTCTGTTCAGTTGGATGTCCAAGAAAGCCATGTGGTCATGGGAAAT GGTAAAGTGAAAGTGACCATATCAAAACCAGATGGTTTTGTTACCGGAATCTCTTACCAG GGCGTCGACAATCTACTAGAAACTCACAACGAAGATTTCAATCGAGGGTACTGGGACCTT GTTTGGAGCGATGAAGGGACGCCTGGAACCACAGGGAAATCCGAGCGGATCAAAGGCACA AGTTTTGAAGTAGTAGTGGAAAATGAAGAGCTGGTAGAAATTTCCTTCTCAAGGAAATGG GATTCTTCTCTCCAAGACAGTATTGCTCCTATTAATGTTGACAAGAGGTTCATAATGCGT AAAGATGTAACTGGATTCTACTCATATGCGATATTTGAGCATCTAGCGGAATGGCCAGCT TTTAACTTGCCTCAGACAAGGATTGTCTACAAGCTTCGTAAAGACAAGTTTAAATATATG GCGATTGCTGATAACAGGCAGAGGAAAATGCCACTTCCAGAGGATAGATTGGGGAAAAGA GGAAGACCTTTGGCTTATCCTGAAGCTGTTCTTCTTGTTCATCCTGTTGAAGACGAGTTT AAAGGAGAGGTTGATGACAAGTATGAGTATTCAAGTGAGAACAAAGATCTGAAAGTGCAT GGATGGATCTCACATAACTTGGATTTGGGTTGCTGGCAAATCATTCCTAGCAATGAGTTC AGATCAGGTGGCTTGTCCAAACAGAACCTTACTTCTCATGTTGGTCCCATCAGTCTTGCT ATGTTTTTGAGTGCTCACTACGCGGGTGAGGATATGGTGATGAAGGTGAAAGCAGGGGAC TCATGGAAGAAAGTGTTTGGTCCTGTCTTTACTTACCTCAATTGCTTGCCTGACAAAACC TCTGACCCTCTTTCGCTATGGCAAGACGCTAAAAACCAGATGTTAACTGAAGTCCAAAGC TGGCCTTACGATTTCCCTGCTTCAGAAGACTTTCCAGTGTCCGATAAGCGCGGTTGCATC AGCGGTAGATTACTAGTATGCGACAAATTTCTTAGTGATGATTTTTTACCAGCAAATGGT GCTTTCGTAGGGTTGGCTCCACCAGGAGAGGTTGGATCCTGGCAATTAGAATCTAAGGGA TATCAATTCTGGACAGAAGCAGATTCTGATGGTTATTTCGCGATAAATGATATCCGAGAA GGCGAGTATAATCTCAATGGTTATGTGACAGGATGGATAGGAGACTATCAATACGAACAA TTGATTAACATTACTGCAGGCTGCGACATTGACGTTGGCAATATCGTGTATGAACCGCCC CGAGATGGGCCAACAGTGTGGGAAATAGGGATACCTGACCGGTCTGCAGCTGAGTTCTTT GTTCCAGACCCAAATCCCAAATACATCAACAAACTATATATTGGTCATCCTGATAGGTTT AGGCAATACGGGCTATGGGAAAGATACACAGAACTATATCCTAAGGAAGATTTGGTGTTC ACCATTGGCGTCAGTGATTACAAAAAAGATTGGTTCTTTGCACACGTTACCAGGAAAATG GGAGATGATACATATCAGAAAACAACATGGCAAATCAAGTTCAAGCTAGAGAATGTACAG AAAAGTTGCACATACAAAATCCGGATCGCGCTAGCAACTGCAAATGTAGCAGAATTACAG GTGAGGATGAATGATGATGACACAGAAAAGACTACTCCTATATTCACAACGGGTGTAATC GGGCACGATAACGCGATTGCAAGACATGGGATACATGGAATCTATAGGCTTTATAATGTG GATGTACCAAGTGAGAAGCTTGTGGAAGGAGACAACACTTTGTTCTTGACACAAACCATG ACCACCACTGGAGCCTTTAATGGTCTCATGTATGACTATATCCGCCTCGAAGGACCTCCT TTAGATTCATACTCTCACTAG

Peptide Sequence

PEP ID	AT4G24430.1
PEP Infomation	\| Rhamnogalacturonate lyase family protein \| Chr4:12630018-12632975 FORWARD LENGTH=646 \| 201606
Sequence	MSNQDSVQLDVQESHVVMGNGKVKVTISKPDGFVTGISYQGVDNLLETHNEDFNRGYWDL VWSDEGTPGTTGKSERIKGTSFEVVVENEELVEISFSRKWDSSLQDSIAPINVDKRFIMR KDVTGFYSYAIFEHLAEWPAFNLPQTRIVYKLRKDKFKYMAIADNRQRKMPLPEDRLGKR GRPLAYPEAVLLVHPVEDEFKGEVDDKYEYSSENKDLKVHGWISHNLDLGCWQIIPSNEF RSGGLSKQNLTSHVGPISLAMFLSAHYAGEDMVMKVKAGDSWKKVFGPVFTYLNCLPDKT SDPLSLWQDAKNQMLTEVQSWPYDFPASEDFPVSDKRGCISGRLLVCDKFLSDDFLPANG AFVGLAPPGEVGSWQLESKGYQFWTEADSDGYFAINDIREGEYNLNGYVTGWIGDYQYEQ LINITAGCDIDVGNIVYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRF RQYGLWERYTELYPKEDLVFTIGVSDYKKDWFFAHVTRKMGDDTYQKTTWQIKFKLENVQ KSCTYKIRIALATANVAELQVRMNDDDTEKTTPIFTTGVIGHDNAIARHGIHGIYRLYNV DVPSEKLVEGDNTLFLTQTMTTTGAFNGLMYDYIRLEGPPLDSYSH

Transcript Sequence

Transcript ID	AT4G24430.1
Transcript Infomation	\| Rhamnogalacturonate lyase family protein \| Chr4:12629951-12633132 FORWARD LENGTH=2165 \| 201606
Sequence	TACAAAAGCTTCAACCTCATATCTCTGAAAACAACACAATTAGAAAGAAAGATTGTGAGA GAAAGAGATGTCGAACCAAGATTCTGTTCAGTTGGATGTCCAAGAAAGCCATGTGGTCAT GGGAAATGGTAAAGTGAAAGTGACCATATCAAAACCAGATGGTTTTGTTACCGGAATCTC TTACCAGGGCGTCGACAATCTACTAGAAACTCACAACGAAGATTTCAATCGAGGGTACTG GGACCTTGTTTGGAGCGATGAAGGGACGCCTGGAACCACAGGGAAATCCGAGCGGATCAA AGGCACAAGTTTTGAAGTAGTAGTGGAAAATGAAGAGCTGGTAGAAATTTCCTTCTCAAG GAAATGGGATTCTTCTCTCCAAGACAGTATTGCTCCTATTAATGTTGACAAGAGGTTCAT AATGCGTAAAGATGTAACTGGATTCTACTCATATGCGATATTTGAGCATCTAGCGGAATG GCCAGCTTTTAACTTGCCTCAGACAAGGATTGTCTACAAGCTTCGTAAAGACAAGTTTAA ATATATGGCGATTGCTGATAACAGGCAGAGGAAAATGCCACTTCCAGAGGATAGATTGGG GAAAAGAGGAAGACCTTTGGCTTATCCTGAAGCTGTTCTTCTTGTTCATCCTGTTGAAGA CGAGTTTAAAGGAGAGGTTGATGACAAGTATGAGTATTCAAGTGAGAACAAAGATCTGAA AGTGCATGGATGGATCTCACATAACTTGGATTTGGGTTGCTGGCAAATCATTCCTAGCAA TGAGTTCAGATCAGGTGGCTTGTCCAAACAGAACCTTACTTCTCATGTTGGTCCCATCAG TCTTGCTATGTTTTTGAGTGCTCACTACGCGGGTGAGGATATGGTGATGAAGGTGAAAGC AGGGGACTCATGGAAGAAAGTGTTTGGTCCTGTCTTTACTTACCTCAATTGCTTGCCTGA CAAAACCTCTGACCCTCTTTCGCTATGGCAAGACGCTAAAAACCAGATGTTAACTGAAGT CCAAAGCTGGCCTTACGATTTCCCTGCTTCAGAAGACTTTCCAGTGTCCGATAAGCGCGG TTGCATCAGCGGTAGATTACTAGTATGCGACAAATTTCTTAGTGATGATTTTTTACCAGC AAATGGTGCTTTCGTAGGGTTGGCTCCACCAGGAGAGGTTGGATCCTGGCAATTAGAATC TAAGGGATATCAATTCTGGACAGAAGCAGATTCTGATGGTTATTTCGCGATAAATGATAT CCGAGAAGGCGAGTATAATCTCAATGGTTATGTGACAGGATGGATAGGAGACTATCAATA CGAACAATTGATTAACATTACTGCAGGCTGCGACATTGACGTTGGCAATATCGTGTATGA ACCGCCCCGAGATGGGCCAACAGTGTGGGAAATAGGGATACCTGACCGGTCTGCAGCTGA GTTCTTTGTTCCAGACCCAAATCCCAAATACATCAACAAACTATATATTGGTCATCCTGA TAGGTTTAGGCAATACGGGCTATGGGAAAGATACACAGAACTATATCCTAAGGAAGATTT GGTGTTCACCATTGGCGTCAGTGATTACAAAAAAGATTGGTTCTTTGCACACGTTACCAG GAAAATGGGAGATGATACATATCAGAAAACAACATGGCAAATCAAGTTCAAGCTAGAGAA TGTACAGAAAAGTTGCACATACAAAATCCGGATCGCGCTAGCAACTGCAAATGTAGCAGA ATTACAGGTGAGGATGAATGATGATGACACAGAAAAGACTACTCCTATATTCACAACGGG TGTAATCGGGCACGATAACGCGATTGCAAGACATGGGATACATGGAATCTATAGGCTTTA TAATGTGGATGTACCAAGTGAGAAGCTTGTGGAAGGAGACAACACTTTGTTCTTGACACA AACCATGACCACCACTGGAGCCTTTAATGGTCTCATGTATGACTATATCCGCCTCGAAGG ACCTCCTTTAGATTCATACTCTCACTAGGACTTTTAGTCACATTATTGTATACGCAATTT TGTATTGCGGGTTACTTTACTAATAAAAAAAAAGACATTATATGGGCCTTGTGTTGGGCC TTCTTTCTAATCTCAGATTTGACTTTATTACAAACGAAAGGGTAAGAATGTAATTTTTCG CCGAC