Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G21880.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr4:11605156-11610651 FORWARD LENGTH=2532 \| 201606
Sequence	ATGGCTTTAAAGGCGAAGAAAAGCTTAAGCGCGATATTTCGCTTTGCGATGAGAAACGCT GCCAAAACTGCCGAAGTTGAAGCCAAAGCCGTAGCCGGAGATTCTCTGATTTCAGACACT GGACCAGTGTCAATGTCTTTAATACCGGATTTTCTCTCATCGCTTAAGTCTCCGGAAGAT TCTTCCAACATTGGTCAAGATTTTGGTGAACCGGCACTTGCGGGTCAGGTCTCGTCTGCG TTAGATGTTAAATCTATTGGATATAATCTTCTTCGAGAAAGAAATGGCGAGAAAGTTTTT CCGAAGAACGTATTGGAAACCTTAGATTTACTGTCTAGGAAAGGTTGTTCGTCGCAAAAG CCAAAGCAGGCTTCACGTGGTAGGATGCTGACAGAAAATTACCAGAACAAACAGTCTGAG ATTATGGAGAAGCTTGCCAAGGGATGTGTTCGGAAGTTGGGAACTGAGACTATGTTTGAG GTGTTGACTAAAATGGGGAAAGAAGCGGGTGAGAAAGAATACAATGCAATGACTAAACTT TGCATACAACGTGCGAGGAGAAGCAATGATGCAGAATATGCTCTTGATCAAATTGGGAAG GCTATTGAACATCTCAAAGAAATGAGACAGCTTGGATTCTCTATTGGAGAAGGAGCTTAT GGCCCTTTTTTTAAGTACTTAGTTGATATGGAAATGGTAGCGGAGTTCCAAATTCTCAAG GATTTTATTAAGGAGGCATGTCCTGAGTCTTGTGGGAGACTTGTCTACTATGAAATGCTT CTTTGGATCCAAGTCAACGACGAAGAGAAGATCCACAAACTTTGCAATAAAGTTGATGAT AGTGGGCTAAGTTTATCAATCCTACAAGAATATTATTTGGTTGCACTGTGCGAGAAAGAC AGTAAGGAAAATTTTCAGAAGCTGTTAGAAATTGTCGACATAACAACAGTATCTTCACCA GACGCATTGAAGAGCATATTTGGATACCTTGGAAAATCGCTGTTGGAGTCTGTTGCAATG AAGCTACTTTGGGAACTAAGAGACTGTCGTAAAGATGGAGTGGAGACAGTTTCAAATCTC ATATTCAGCTATGCAACCTGCATCCCAAATTCAACGGTAGAGGATGCCATTTTCAAGTTT AACAAGTTGCATGAAGAACTAGATATCGTGCCTTCATCTACATCTTATGAGAATCTTGTC AGTTATCTTTGTGGCTCAAATGAGGTGGTCACTGCTCTTGATATAGTTGAAAATATGTGT GAAGCAGGTCTGGTAATATCAGCAAACATCCTGCACTCATTGTTACAGGCCATTGAGCAG ATTCTTGAGTTTAATTTGGTGCAAAGAATCTATTCAATAATGAGCAACAAGAGTGTGAAG CCAAATAGTGAGACTTTCAGGAAATCTATAAATTTGTGCATAAGAATCAAAGATTTTGAA GGTGCATATAACATGCTTGGTAATTTAAAGAATTTCAATTTGGCACCGAACTCTAGCATG TACAATTCTATAATGGCAGGATATTTCCGGGAGAAAAAAGTGAACAGTGCCTTAAAGGTC CTCAAGGAAATGAAAGAAGCTGATGTTAAACCTGATTCGGTGACTTTTAGCTATCTAATA AACTATTGTGGCGAGGAGGCGACTATTGCGAAGTATTATAAGGAGATGAAGCAAGCAGGA GTTGAAGTTAATAAGCACGTTTACATGTCCCTTGTTAAAGCATATGCATCATGCGGACAG TTTGAAAAGGCAAAACAGGTGCTCATGGACCTGGAAGTTCCGGCTAAGGATCACAATGAG CTGAAAAGTGTACTTATATCTGCTCTGGCATCAAATGGAAATATAACAGAGGCTTTAAGT ATTTATGAAGAAATGAAGAAACTCCGCTGCCCCGTAGAGCCAAAAGCTATCTTATCTCTT ATAGAGAACTCTGATTCAAACGCAGAGCTGGGAACGTTGGTTGAACTCACTCATGAGCTG CGTGATTCTAAATTTTGGATAGATGGTTTCTTCAAAATTATCGTGTTTGCTGTTCGCAAC AATAGATCAAGCTCTATTCTGGATTTGTTAGAGCAGACCAAAAACCACTTGTCCAAGGAT GACGTCGGTGTGGAATATTGGTTTGAAGAGGTGTTTAAGTCAATAGCGGAAACAGAGTCT AGTGATGTGAAGGTAGGGCTGGACTTGGTGAGTTTTATGAAAGAAGAGCTTGAGTTATGT CCTTCAAGAAAATGTCTGGATTTTCTTCTACATGCTTGTGTCAATGCCAAAGATAAGCAG AGCGCTCTACTGGTATGGGAAGAGTACCAATGTGCAGAACTTCCTTACAATGTCATCAAC TATTTAAGGATGTATCAGGTTCTAGTAGCTGCAGGAGATTCGAAAAGTGCAGAGGCAATA GTATCAAAGATTCCTAATGATGATAAAGATGTCAAATGTATAATTAAAGAAAGCCGTATT GTATTTACTCCAAAACTGAAGAAGAAAAAGAAAAAGTCTAAACAGAAAGGATTATCTCTT CAAGCAAAGTAG

Peptide Sequence

PEP ID	AT4G21880.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr4:11605156-11610651 FORWARD LENGTH=843 \| 201606
Sequence	MALKAKKSLSAIFRFAMRNAAKTAEVEAKAVAGDSLISDTGPVSMSLIPDFLSSLKSPED SSNIGQDFGEPALAGQVSSALDVKSIGYNLLRERNGEKVFPKNVLETLDLLSRKGCSSQK PKQASRGRMLTENYQNKQSEIMEKLAKGCVRKLGTETMFEVLTKMGKEAGEKEYNAMTKL CIQRARRSNDAEYALDQIGKAIEHLKEMRQLGFSIGEGAYGPFFKYLVDMEMVAEFQILK DFIKEACPESCGRLVYYEMLLWIQVNDEEKIHKLCNKVDDSGLSLSILQEYYLVALCEKD SKENFQKLLEIVDITTVSSPDALKSIFGYLGKSLLESVAMKLLWELRDCRKDGVETVSNL IFSYATCIPNSTVEDAIFKFNKLHEELDIVPSSTSYENLVSYLCGSNEVVTALDIVENMC EAGLVISANILHSLLQAIEQILEFNLVQRIYSIMSNKSVKPNSETFRKSINLCIRIKDFE GAYNMLGNLKNFNLAPNSSMYNSIMAGYFREKKVNSALKVLKEMKEADVKPDSVTFSYLI NYCGEEATIAKYYKEMKQAGVEVNKHVYMSLVKAYASCGQFEKAKQVLMDLEVPAKDHNE LKSVLISALASNGNITEALSIYEEMKKLRCPVEPKAILSLIENSDSNAELGTLVELTHEL RDSKFWIDGFFKIIVFAVRNNRSSSILDLLEQTKNHLSKDDVGVEYWFEEVFKSIAETES SDVKVGLDLVSFMKEELELCPSRKCLDFLLHACVNAKDKQSALLVWEEYQCAELPYNVIN YLRMYQVLVAAGDSKSAEAIVSKIPNDDKDVKCIIKESRIVFTPKLKKKKKKSKQKGLSL QAK

Transcript Sequence

Transcript ID	AT4G21880.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr4:11604986-11610651 FORWARD LENGTH=2702 \| 201606
Sequence	AAAGATTAATTACATAAGTGCCACTACCACAAAATCTTGCAGGGTTTATCAAACACTTGT TCCGAATGATTCATCTTCTTCTTCTTCTTCTTCTCCGATCTCATGTTATTGGGGGATTTC GTTCTAGGCCTTGATTCGATTTTGTTAACTGTTGTAAATGTGAAAAAACAATGGCTTTAA AGGCGAAGAAAAGCTTAAGCGCGATATTTCGCTTTGCGATGAGAAACGCTGCCAAAACTG CCGAAGTTGAAGCCAAAGCCGTAGCCGGAGATTCTCTGATTTCAGACACTGGACCAGTGT CAATGTCTTTAATACCGGATTTTCTCTCATCGCTTAAGTCTCCGGAAGATTCTTCCAACA TTGGTCAAGATTTTGGTGAACCGGCACTTGCGGGTCAGGTCTCGTCTGCGTTAGATGTTA AATCTATTGGATATAATCTTCTTCGAGAAAGAAATGGCGAGAAAGTTTTTCCGAAGAACG TATTGGAAACCTTAGATTTACTGTCTAGGAAAGGTTGTTCGTCGCAAAAGCCAAAGCAGG CTTCACGTGGTAGGATGCTGACAGAAAATTACCAGAACAAACAGTCTGAGATTATGGAGA AGCTTGCCAAGGGATGTGTTCGGAAGTTGGGAACTGAGACTATGTTTGAGGTGTTGACTA AAATGGGGAAAGAAGCGGGTGAGAAAGAATACAATGCAATGACTAAACTTTGCATACAAC GTGCGAGGAGAAGCAATGATGCAGAATATGCTCTTGATCAAATTGGGAAGGCTATTGAAC ATCTCAAAGAAATGAGACAGCTTGGATTCTCTATTGGAGAAGGAGCTTATGGCCCTTTTT TTAAGTACTTAGTTGATATGGAAATGGTAGCGGAGTTCCAAATTCTCAAGGATTTTATTA AGGAGGCATGTCCTGAGTCTTGTGGGAGACTTGTCTACTATGAAATGCTTCTTTGGATCC AAGTCAACGACGAAGAGAAGATCCACAAACTTTGCAATAAAGTTGATGATAGTGGGCTAA GTTTATCAATCCTACAAGAATATTATTTGGTTGCACTGTGCGAGAAAGACAGTAAGGAAA ATTTTCAGAAGCTGTTAGAAATTGTCGACATAACAACAGTATCTTCACCAGACGCATTGA AGAGCATATTTGGATACCTTGGAAAATCGCTGTTGGAGTCTGTTGCAATGAAGCTACTTT GGGAACTAAGAGACTGTCGTAAAGATGGAGTGGAGACAGTTTCAAATCTCATATTCAGCT ATGCAACCTGCATCCCAAATTCAACGGTAGAGGATGCCATTTTCAAGTTTAACAAGTTGC ATGAAGAACTAGATATCGTGCCTTCATCTACATCTTATGAGAATCTTGTCAGTTATCTTT GTGGCTCAAATGAGGTGGTCACTGCTCTTGATATAGTTGAAAATATGTGTGAAGCAGGTC TGGTAATATCAGCAAACATCCTGCACTCATTGTTACAGGCCATTGAGCAGATTCTTGAGT TTAATTTGGTGCAAAGAATCTATTCAATAATGAGCAACAAGAGTGTGAAGCCAAATAGTG AGACTTTCAGGAAATCTATAAATTTGTGCATAAGAATCAAAGATTTTGAAGGTGCATATA ACATGCTTGGTAATTTAAAGAATTTCAATTTGGCACCGAACTCTAGCATGTACAATTCTA TAATGGCAGGATATTTCCGGGAGAAAAAAGTGAACAGTGCCTTAAAGGTCCTCAAGGAAA TGAAAGAAGCTGATGTTAAACCTGATTCGGTGACTTTTAGCTATCTAATAAACTATTGTG GCGAGGAGGCGACTATTGCGAAGTATTATAAGGAGATGAAGCAAGCAGGAGTTGAAGTTA ATAAGCACGTTTACATGTCCCTTGTTAAAGCATATGCATCATGCGGACAGTTTGAAAAGG CAAAACAGGTGCTCATGGACCTGGAAGTTCCGGCTAAGGATCACAATGAGCTGAAAAGTG TACTTATATCTGCTCTGGCATCAAATGGAAATATAACAGAGGCTTTAAGTATTTATGAAG AAATGAAGAAACTCCGCTGCCCCGTAGAGCCAAAAGCTATCTTATCTCTTATAGAGAACT CTGATTCAAACGCAGAGCTGGGAACGTTGGTTGAACTCACTCATGAGCTGCGTGATTCTA AATTTTGGATAGATGGTTTCTTCAAAATTATCGTGTTTGCTGTTCGCAACAATAGATCAA GCTCTATTCTGGATTTGTTAGAGCAGACCAAAAACCACTTGTCCAAGGATGACGTCGGTG TGGAATATTGGTTTGAAGAGGTGTTTAAGTCAATAGCGGAAACAGAGTCTAGTGATGTGA AGGTAGGGCTGGACTTGGTGAGTTTTATGAAAGAAGAGCTTGAGTTATGTCCTTCAAGAA AATGTCTGGATTTTCTTCTACATGCTTGTGTCAATGCCAAAGATAAGCAGAGCGCTCTAC TGGTATGGGAAGAGTACCAATGTGCAGAACTTCCTTACAATGTCATCAACTATTTAAGGA TGTATCAGGTTCTAGTAGCTGCAGGAGATTCGAAAAGTGCAGAGGCAATAGTATCAAAGA TTCCTAATGATGATAAAGATGTCAAATGTATAATTAAAGAAAGCCGTATTGTATTTACTC CAAAACTGAAGAAGAAAAAGAAAAAGTCTAAACAGAAAGGATTATCTCTTCAAGCAAAGT AG