Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G19490.1
CDS Infomation	\| VPS54 \| Chr4:10616017-10622934 FORWARD LENGTH=3105 \| 201606
Sequence	ATGGATTCACACCCTTCCCTAATGGGAAGGTCCATTACCAATTCGAACCGATCGAGCTTA GATCTTGGTCGTCCTTCTTCGTCTTCTTCATCTTCTCCTTCACCGTTAACCAAATCGATC TCCGATGCAAGTAGTCAAAGTCTCTCTTCGATCCTTAACAATCCACACGGAGGTAAGTCT GGTGTTTATGGTTCCGATGCATCTTGGGTTGGTTGGTGGTCTTCATCGACATTTGTAGCT CCAGCTGAGTTTGCGCCTGTTGCTTCAACGAAGCTCCCTGGTTCGGAGCTAACCAGATCC GACTTCCATGGCTACGTTTCTTCGATCTCTGAGTCTCATGGTAGATTTGAGGATATTAGG AAGCATACTAGGGAAGAGAGCTGTGGGTTTGATCAGGAGAGCCATGTATCGGGTTTAGCT GCGTGTTTGCGTGAGGTTCCTTCGCTTTACTTTAAGGAGGATTTTGCTCTTGAGGACGGA GCTACATTTCGTTCTGCTTGCCCTTTCTCGAGCCTTAATGAGAATCTAGCGCTTCAAGAG AAGTTGTCACAGTATCTTGATGTGGTGGAGCTGCATCTTGTGAAGGAGATCTCTGTGAGG TCTGATTCGTTTTTTGAGGCTCAAGGACAGTTACAGGATTTGAATGTGAAGATTGTTGAG GGTTGTAGTAGGATTCGTGAGTTGAAAGAGACTATTCGGCTCCTGGATAGGAATTTGGTA GATTCAGCTCGACAGATTCAAGAGCTGAGCTCAACTAGGATTAATATGCTGGAGCTGCAA CGTAAATTAAGACTTATTTTGTATGTTAACCAAGCTCTCTCTGCACTCAAATTGCTTGTT GCGTCCGCAGATTGTGCTGGAGCTTTGGATATAACTGACGATCTCCAGAACTTGCTGGCT GGGGATGAGCTTACTGGTCTATACTGCTTCCGCCATCTTCGGGATCATGTTACTAGTTCC ATAGATTCCATAAACAGTATTCTCACTTCAGAATTCATGCGTATCTCCATACATGATACT GGGGAGATAGATGTACTGATTTTATCTGCAGCAAATATACGGGGATCCATTTCATCTAAC GGGAATACCGGCGAAGAAGTTAAGTTAGAAGAAGAGGATACCTCTACCTTATGTGATCGG CTTCTTCCTTTAGTTATTGGATTGCTAAGAACGGCAAAGTTCCCGTCAATTTTGAGGATG TATCGTGATACACTCACATCCGAAATGAAAAATGCAATCAAGAAAGCAGTTGCTGATCTG CTTCCCATTCTTGTTGCAAGATCGCTCGAATCTGATTTTTCACATGGGGAGCGCTCTGTA GATGATGGTGGTGGCTTATCTCTCGCGAGCAAATTGAGGACTCTGTCATCTGAGGCTTTT GTTAATCTCTTAACTGCTATATTTAAGATTGTTCAGGCACATCTAGTCCGGGCTTCGGAA GTGAAAAAAGCAATTGAATGGATTCTCTGCAATATCGATGGACATTATGCCGCTGATTCA GTTGCAGCTGCAATTGCTGTTGGTGCTGTAGCAGCCGAAACAGCTCAAGAAATAGGTTTC CAAGGCGGGTCATTAGTGTCTTCTCCATTGGGTAAGGCTACCTCAAAGGCCCCTCCATTG CAGGGAAAATCGAGTGATGCATCAAGCTTGATGAACATGTCAAGAAACTTCAGGGCCGAT GTCTTGAGAGAAAATACAGAAGCTGTCTTTGCGGCTTGTGAGGTTACTCATGGTAGGTGG GCAAAGCTACTAGGAGTTCGCGCTCTTCTTCATCCAAAATTGAAATTGCAAGAGTTCATG AGCATTTATGATCTGACCCAAGAATTTATAACATCTACGGAGAAGATTGGTGGAAGGTTG GGTTCTAGTATTCGTGGGACGCTGCAATCACAAGCCAAAGCCTTTGTGGACTCCCAGCAC GAATCTCGGATGACAAAACTAAAAGCTGTGCTTGATCAAGAAACATGGGATGAGATAGAT GTTCCTGAAGAATTTCAATCCATAATCAGTTCTCTTTTTGCATCCCAGCGGTTGATCTCT GGGAAAGTTGATGATGCTGATCTTAATTCATACCACAGTAATCGGCTCCCTCTCAATGGG TCTCTCACTTCTGGATCTGGGGATCAAAATAGTGAATTACGAAATGAAAAATCTGAATCT AGTGAAGGTTCTGTAGTTAGTGATGCACAAGTGAAACCCACAGTCTCACCTGAGTCTCTT GAAAGAAGCAAGGCTGGTGTATCTTCAGCTACGAATAATCAAAGTAATCAGAAGGCGCAC GGAAAATCTAACCTTTTCTATCAAGGAGTTGGTTACCACATGGTAAACTGTGGGTTAATA TTGCTCAAGATGCTGTCGGAATACATTGATATGAACAATTCTTTGCCAGCTTTGTCCTCG GAAATTGTTCTTCGTGTTGTTGAAGTGTTGAGATTTTTCAACACTCGGACATGCCAACTT GTTCTGGGTGCTGGTGCTATGCAGGTATCTGGTTTGAAGTCCATAAAGGCGAAACACTTG GCGCTTGCAAGTCAAGTAATCGACTTCACTTACACTATTATTCCTGAAACCAGAAGGATT CTGTTTTCAAAAGTACCTGAGACGAGAAAGCCTCTGTTGTCAGTAGAGATTGATAAAGTT GCTCAGGATTTTAGAATTCATCGAGATGAAATATACACAAAACTGGTTCAGATTATGAGA GAAAGACTATTGGCGCATCTTCATGGTTTGCCCAAAGTTGTTGAGGGCTGGAACAGACCT CCAGATACCAATAAACAAACTAAAGAGTTTGCATGGCCGCTCACAAGGGAAGTTGGCTAC CTTCACCGTGTGTTGTCTGAGACATTGCACGAAGCCGATGTTCAAGCAATCTTCAGGCAG GTGATTTCAATTATCCACACACAAACCTCTCAAACGCTTACGAACTTGGAGATAAGCTCA ACAGAGGCAAAGAAAAGGCTGAAGCTTCATGTCGAGCTAATCCTCAAATGCATCCGGTCG TTACCATCCGACAATGCCAATCAATCAGACATCCCAAACTGGGGACAACTAGATGAATTC TTTGCAGAGCACTTTAGAGAAGAAGAAGCAGGCGAAGCTGAGTGA

Peptide Sequence

PEP ID	AT4G19490.1
PEP Infomation	\| VPS54 \| Chr4:10616017-10622934 FORWARD LENGTH=1034 \| 201606
Sequence	MDSHPSLMGRSITNSNRSSLDLGRPSSSSSSSPSPLTKSISDASSQSLSSILNNPHGGKS GVYGSDASWVGWWSSSTFVAPAEFAPVASTKLPGSELTRSDFHGYVSSISESHGRFEDIR KHTREESCGFDQESHVSGLAACLREVPSLYFKEDFALEDGATFRSACPFSSLNENLALQE KLSQYLDVVELHLVKEISVRSDSFFEAQGQLQDLNVKIVEGCSRIRELKETIRLLDRNLV DSARQIQELSSTRINMLELQRKLRLILYVNQALSALKLLVASADCAGALDITDDLQNLLA GDELTGLYCFRHLRDHVTSSIDSINSILTSEFMRISIHDTGEIDVLILSAANIRGSISSN GNTGEEVKLEEEDTSTLCDRLLPLVIGLLRTAKFPSILRMYRDTLTSEMKNAIKKAVADL LPILVARSLESDFSHGERSVDDGGGLSLASKLRTLSSEAFVNLLTAIFKIVQAHLVRASE VKKAIEWILCNIDGHYAADSVAAAIAVGAVAAETAQEIGFQGGSLVSSPLGKATSKAPPL QGKSSDASSLMNMSRNFRADVLRENTEAVFAACEVTHGRWAKLLGVRALLHPKLKLQEFM SIYDLTQEFITSTEKIGGRLGSSIRGTLQSQAKAFVDSQHESRMTKLKAVLDQETWDEID VPEEFQSIISSLFASQRLISGKVDDADLNSYHSNRLPLNGSLTSGSGDQNSELRNEKSES SEGSVVSDAQVKPTVSPESLERSKAGVSSATNNQSNQKAHGKSNLFYQGVGYHMVNCGLI LLKMLSEYIDMNNSLPALSSEIVLRVVEVLRFFNTRTCQLVLGAGAMQVSGLKSIKAKHL ALASQVIDFTYTIIPETRRILFSKVPETRKPLLSVEIDKVAQDFRIHRDEIYTKLVQIMR ERLLAHLHGLPKVVEGWNRPPDTNKQTKEFAWPLTREVGYLHRVLSETLHEADVQAIFRQ VISIIHTQTSQTLTNLEISSTEAKKRLKLHVELILKCIRSLPSDNANQSDIPNWGQLDEF FAEHFREEEAGEAE

Transcript Sequence

Transcript ID	AT4G19490.1
Transcript Infomation	\| VPS54 \| Chr4:10615696-10623524 FORWARD LENGTH=3793 \| 201606
Sequence	TTTCTGTAGATGACGTGGATACCTAATGCACCGTCGATTAAATCTGCGTAGTGAAACCCC GCACTGCTCACAGCACCACCTCTCTCGAACCATCGAGTCTCGAACCCAGAGAGGACTTTC CTCAGTGAGTCCTCCGTTCCTTAGCTTCTCTTCCAGATCCAAACTCTCACCAAACTTTCT CACAACACACACACAATTCGATTCGATCCACACTCTTAAAATCCCAAAGATCTCTCTGAT TTTGAAATTCGATTCTTCCCCAGATCAACTTGTGAATTTTTCCACAATTTTGGTTCATGA TTTTGATTTCGTGAAGGACTTATGGATTCACACCCTTCCCTAATGGGAAGGTCCATTACC AATTCGAACCGATCGAGCTTAGATCTTGGTCGTCCTTCTTCGTCTTCTTCATCTTCTCCT TCACCGTTAACCAAATCGATCTCCGATGCAAGTAGTCAAAGTCTCTCTTCGATCCTTAAC AATCCACACGGAGGTAAGTCTGGTGTTTATGGTTCCGATGCATCTTGGGTTGGTTGGTGG TCTTCATCGACATTTGTAGCTCCAGCTGAGTTTGCGCCTGTTGCTTCAACGAAGCTCCCT GGTTCGGAGCTAACCAGATCCGACTTCCATGGCTACGTTTCTTCGATCTCTGAGTCTCAT GGTAGATTTGAGGATATTAGGAAGCATACTAGGGAAGAGAGCTGTGGGTTTGATCAGGAG AGCCATGTATCGGGTTTAGCTGCGTGTTTGCGTGAGGTTCCTTCGCTTTACTTTAAGGAG GATTTTGCTCTTGAGGACGGAGCTACATTTCGTTCTGCTTGCCCTTTCTCGAGCCTTAAT GAGAATCTAGCGCTTCAAGAGAAGTTGTCACAGTATCTTGATGTGGTGGAGCTGCATCTT GTGAAGGAGATCTCTGTGAGGTCTGATTCGTTTTTTGAGGCTCAAGGACAGTTACAGGAT TTGAATGTGAAGATTGTTGAGGGTTGTAGTAGGATTCGTGAGTTGAAAGAGACTATTCGG CTCCTGGATAGGAATTTGGTAGATTCAGCTCGACAGATTCAAGAGCTGAGCTCAACTAGG ATTAATATGCTGGAGCTGCAACGTAAATTAAGACTTATTTTGTATGTTAACCAAGCTCTC TCTGCACTCAAATTGCTTGTTGCGTCCGCAGATTGTGCTGGAGCTTTGGATATAACTGAC GATCTCCAGAACTTGCTGGCTGGGGATGAGCTTACTGGTCTATACTGCTTCCGCCATCTT CGGGATCATGTTACTAGTTCCATAGATTCCATAAACAGTATTCTCACTTCAGAATTCATG CGTATCTCCATACATGATACTGGGGAGATAGATGTACTGATTTTATCTGCAGCAAATATA CGGGGATCCATTTCATCTAACGGGAATACCGGCGAAGAAGTTAAGTTAGAAGAAGAGGAT ACCTCTACCTTATGTGATCGGCTTCTTCCTTTAGTTATTGGATTGCTAAGAACGGCAAAG TTCCCGTCAATTTTGAGGATGTATCGTGATACACTCACATCCGAAATGAAAAATGCAATC AAGAAAGCAGTTGCTGATCTGCTTCCCATTCTTGTTGCAAGATCGCTCGAATCTGATTTT TCACATGGGGAGCGCTCTGTAGATGATGGTGGTGGCTTATCTCTCGCGAGCAAATTGAGG ACTCTGTCATCTGAGGCTTTTGTTAATCTCTTAACTGCTATATTTAAGATTGTTCAGGCA CATCTAGTCCGGGCTTCGGAAGTGAAAAAAGCAATTGAATGGATTCTCTGCAATATCGAT GGACATTATGCCGCTGATTCAGTTGCAGCTGCAATTGCTGTTGGTGCTGTAGCAGCCGAA ACAGCTCAAGAAATAGGTTTCCAAGGCGGGTCATTAGTGTCTTCTCCATTGGGTAAGGCT ACCTCAAAGGCCCCTCCATTGCAGGGAAAATCGAGTGATGCATCAAGCTTGATGAACATG TCAAGAAACTTCAGGGCCGATGTCTTGAGAGAAAATACAGAAGCTGTCTTTGCGGCTTGT GAGGTTACTCATGGTAGGTGGGCAAAGCTACTAGGAGTTCGCGCTCTTCTTCATCCAAAA TTGAAATTGCAAGAGTTCATGAGCATTTATGATCTGACCCAAGAATTTATAACATCTACG GAGAAGATTGGTGGAAGGTTGGGTTCTAGTATTCGTGGGACGCTGCAATCACAAGCCAAA GCCTTTGTGGACTCCCAGCACGAATCTCGGATGACAAAACTAAAAGCTGTGCTTGATCAA GAAACATGGGATGAGATAGATGTTCCTGAAGAATTTCAATCCATAATCAGTTCTCTTTTT GCATCCCAGCGGTTGATCTCTGGGAAAGTTGATGATGCTGATCTTAATTCATACCACAGT AATCGGCTCCCTCTCAATGGGTCTCTCACTTCTGGATCTGGGGATCAAAATAGTGAATTA CGAAATGAAAAATCTGAATCTAGTGAAGGTTCTGTAGTTAGTGATGCACAAGTGAAACCC ACAGTCTCACCTGAGTCTCTTGAAAGAAGCAAGGCTGGTGTATCTTCAGCTACGAATAAT CAAAGTAATCAGAAGGCGCACGGAAAATCTAACCTTTTCTATCAAGGAGTTGGTTACCAC ATGGTAAACTGTGGGTTAATATTGCTCAAGATGCTGTCGGAATACATTGATATGAACAAT TCTTTGCCAGCTTTGTCCTCGGAAATTGTTCTTCGTGTTGTTGAAGTGTTGAGATTTTTC AACACTCGGACATGCCAACTTGTTCTGGGTGCTGGTGCTATGCAGGTATCTGGTTTGAAG TCCATAAAGGCGAAACACTTGGCGCTTGCAAGTCAAGTAATCGACTTCACTTACACTATT ATTCCTGAAACCAGAAGGATTCTGTTTTCAAAAGTACCTGAGACGAGAAAGCCTCTGTTG TCAGTAGAGATTGATAAAGTTGCTCAGGATTTTAGAATTCATCGAGATGAAATATACACA AAACTGGTTCAGATTATGAGAGAAAGACTATTGGCGCATCTTCATGGTTTGCCCAAAGTT GTTGAGGGCTGGAACAGACCTCCAGATACCAATAAACAAACTAAAGAGTTTGCATGGCCG CTCACAAGGGAAGTTGGCTACCTTCACCGTGTGTTGTCTGAGACATTGCACGAAGCCGAT GTTCAAGCAATCTTCAGGCAGGTGATTTCAATTATCCACACACAAACCTCTCAAACGCTT ACGAACTTGGAGATAAGCTCAACAGAGGCAAAGAAAAGGCTGAAGCTTCATGTCGAGCTA ATCCTCAAATGCATCCGGTCGTTACCATCCGACAATGCCAATCAATCAGACATCCCAAAC TGGGGACAACTAGATGAATTCTTTGCAGAGCACTTTAGAGAAGAAGAAGCAGGCGAAGCT GAGTGATGAAGTCGTCATTGTACAGCAATTTGTTTCTTCTCACATCCTTTATAAAGTCAA AAATTCAGAGTTTGGGTTTGAGGATGGACTATTCGCCTGTAGATTTAACTTACAGGCATA CTACAGTTCTTGGCTCGGATGAATATTATAAAGCCAACAGTATCTCTATAAAGTAACAAT CTCTCTTCTTGTTTGAATTTTCTCATTTGCCTCAATTGTTGCTTTTTTATTATCCTTTTT GTTTTTGAGTTGTATGAGATACGACTGATTGAACTGAAGTTTTTGAAAGAGGTAAGCAGT AGATTCTTAGACGTATATAATGTATTTTCAGAGCGAGGAAATATTTAGTCATTTGGTGTG TCCACTGCATAAG