Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G18130.1
CDS Infomation	\| phytochrome E \| Chr4:10042312-10045948 REVERSE LENGTH=3339 \| 201606
Sequence	ATGGGATTCGAGAGTTCAAGCTCAGCTGCAAGCAACATGAAACCTCAACCTCAAAAATCC AACACTGCTCAATACTCTGTTGATGCTGCTCTCTTTGCTGATTTCGCTCAATCCATTTAC ACCGGCAAGTCTTTTAACTACTCCAAATCTGTTATTTCACCTCCCAATCACGTTCCTGAT GAACACATCACAGCTTACTTGTCTAACATCCAAAGAGGCGGTCTAGTTCAGCCCTTTGGT TGTTTGATTGCTGTCGAAGAACCTAGTTTTAGGATACTTGGTCTTAGTGACAACTCTTCT GACTTTCTTGGTTTGTTGTCTCTTCCTTCCACCTCCCATTCTGGTGAGTTTGATAAAGTC AAGGGTTTGATTGGAATCGATGCAAGGACGCTTTTTACTCCTTCCTCTGGAGCTTCTTTG TCTAAAGCTGCTTCCTTTACTGAGATTTCCTTGTTGAATCCTGTTTTGGTCCATTCTAGG ACGACCCAGAAGCCTTTTTATGCTATTCTTCACAGGATTGATGCAGGGATTGTCATGGAT TTGGAGCCTGCTAAATCAGGTGATCCGGCTTTGACCCTTGCAGGCGCAGTTCAGTCTCAG AAGCTAGCCGTTAGGGCCATTTCTAGGCTGCAGTCACTTCCCGGAGGAGATATTGGTGCC TTGTGTGATACTGTTGTGGAAGATGTTCAGAGACTTACCGGTTATGACCGTGTTATGGTC TATCAGTTTCATGAAGATGATCATGGTGAAGTTGTTTCTGAGATTAGAAGGTCTGATTTG GAGCCTTATTTGGGTTTACATTATCCGGCAACAGATATTCCTCAGGCTGCTCGGTTCTTG TTCAAACAGAACCGTGTCCGAATGATTTGTGACTGCAATGCAACTCCGGTTAAGGTTGTT CAGAGTGAGGAACTCAAGAGACCACTTTGTTTAGTTAATTCTACTCTAAGAGCTCCTCAT GGCTGCCATACGCAGTATATGGCGAATATGGGCTCTGTAGCTTCTCTTGCACTCGCAATT GTAGTAAAAGGCAAAGATTCGAGCAAGCTTTGGGGATTAGTTGTTGGTCATCATTGTTCT CCTAGATACGTTCCATTCCCGTTGCGGTATGCTTGTGAGTTTCTGATGCAAGCATTTGGG CTTCAGCTTCAAATGGAACTTCAGTTAGCATCACAGTTAGCCGAGAAGAAGGCTATGCGG ACGCAGACCTTGTTGTGCGATATGCTTCTCCGTGATACTGTTTCCGCTATTGTTACACAA TCTCCGGGTATTATGGACCTTGTGAAATGTGATGGAGCTGCGTTATATTACAAGGGGAAA TGTTGGTTGGTTGGTGTTACTCCTAATGAGTCACAAGTTAAAGACTTGGTGAATTGGCTG GTGGAGAATCACGGTGATGATTCGACGGGTTTAACCACTGATAGTTTGGTGGATGCGGGA TACCCTGGTGCCATCTCACTTGGAGATGCCGTTTGTGGTGTGGCTGCCGCAGGATTTTCT TCAAAAGATTACTTACTTTGGTTCAGGTCCAATACTGCAAGTGCAATCAAATGGGGAGGA GCTAAACATCATCCAAAGGATAAAGATGATGCCGGAAGAATGCATCCGAGGTCATCGTTT ACAGCCTTTCTTGAAGTTGCGAAGAGCAGGAGCTTGCCGTGGGAAATCTCAGAAATTGAT GCTATCCATTCCCTGAGACTTATAATGAGAGAGTCATTTACCAGCTCTAGGCCAGTTTTG TCTGGTAATGGCGTAGCAAGAGATGCTAATGAGCTTACTTCTTTTGTGTGTGAAATGGTT AGGGTGATTGAAACCGCAACTGCACCTATTTTTGGGGTTGATTCATCCGGATGTATTAAT GGTTGGAACAAGAAAACCGCTGAAATGACGGGATTACTAGCTAGTGAAGCAATGGGGAAG TCACTTGCCGATGAGATTGTTCAAGAGGAATCACGCGCAGCTCTTGAAAGTCTCTTGTGC AAAGCCCTACAAGGTGAAGAGGAGAAAAGTGTAATGCTGAAACTGAGAAAGTTTGGTCAA AACAATCATCCGGATTATTCTTCTGATGTGTGTGTTCTCGTTAACTCCTGCACGAGTCGG GATTATACTGAAAATATCATCGGTGTCTGCTTCGTTGGTCAAGACATCACTAGTGAGAAA GCAATAACAGATAGATTCATCAGATTGCAAGGAGATTACAAGACTATTGTTCAAAGCTTA AATCCTTTGATTCCACCGATATTTGCTTCAGATGAAAATGCTTGTTGTTCTGAGTGGAAC GCAGCAATGGAAAAGCTTACGGGATGGTCAAAACACGAGGTGATTGGGAAAATGCTACCC GGTGAAGTCTTTGGAGTCTTTTGTAAAGTGAAATGCCAAGATTCGCTCACAAAGTTCTTG ATCTCTCTGTACCAAGGAATTGCTGGTGATAATGTTCCCGAGAGTTCACTGGTTGAGTTC TTTAATAAGGAAGGGAAGTACATAGAAGCATCCTTAACCGCGAACAAGAGTACAAACATC GAAGGAAAAGTTATAAGATGTTTCTTCTTCTTGCAGATTATCAATAAGGAATCGGGGTTG AGCTGCCCAGAACTGAAAGAGAGCGCTCAAAGCCTCAACGAATTAACTTACGTAAGACAA GAAATCAAGAATCCTCTCAACGGTATCCGATTTGCACATAAGCTTCTTGAATCCTCAGAG ATTTCAGCTAGCCAAAGGCAGTTTCTGGAGACTAGTGATGCTTGTGAGAAGCAAATCACG ACAATAATCGAAAGCACGGACTTGAAAAGCATTGAGGAAGGCAAGTTGCAATTGGAAACA GAAGAGTTTCGACTTGAAAACATCTTGGACACAATCATTAGCCAAGTGATGATTATATTG AGAGAGAGGAACTCACAACTAAGGGTTGAAGTCGCCGAGGAGATCAAAACTCTGCCTCTC AATGGTGACAGAGTCAAGCTCCAGCTTATTCTTGCTGATCTTCTACGCAACATTGTGAAT CATGCGCCGTTTCCAAATAGTTGGGTAGGTATCAGTATCTCACCAGGGCAGGAGCTTTCA CGTGACAATGGTCGCTATATCCATCTACAGTTCAGGATGATACATCCGGGGAAAGGACTT CCTTCAGAGATGCTAAGTGATATGTTTGAGACTCGAGATGGATGGGTCACCCCTGATGGT TTAGGGCTTAAGCTTTCGCGGAAACTATTGGAGCAGATGAATGGCCGTGTGAGTTATGTC CGAGAAGACGAACGGTGTTTCTTTCAGGTGGATCTTCAAGTGAAGACAATGTTAGGTGTT GAGTCAAGAGGAACAGAGGGTAGTTCAAGCATAAAGTAG

Peptide Sequence

PEP ID	AT4G18130.1
PEP Infomation	\| phytochrome E \| Chr4:10042312-10045948 REVERSE LENGTH=1112 \| 201606
Sequence	MGFESSSSAASNMKPQPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSVISPPNHVPD EHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLLSLPSTSHSGEFDKV KGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVMD LEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMV YQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVV QSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSSKLWGLVVGHHCS PRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSAIVTQ SPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSLVDAG YPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDDAGRMHPRSSF TAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTSSRPVLSGNGVARDANELTSFVCEMV RVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLADEIVQEESRAALESLLC KALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSRDYTENIIGVCFVGQDITSEK AITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHEVIGKMLP GEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVPESSLVEFFNKEGKYIEASLTANKSTNI EGKVIRCFFFLQIINKESGLSCPELKESAQSLNELTYVRQEIKNPLNGIRFAHKLLESSE ISASQRQFLETSDACEKQITTIIESTDLKSIEEGKLQLETEEFRLENILDTIISQVMIIL RERNSQLRVEVAEEIKTLPLNGDRVKLQLILADLLRNIVNHAPFPNSWVGISISPGQELS RDNGRYIHLQFRMIHPGKGLPSEMLSDMFETRDGWVTPDGLGLKLSRKLLEQMNGRVSYV REDERCFFQVDLQVKTMLGVESRGTEGSSSIK

Transcript Sequence

Transcript ID	AT4G18130.1
Transcript Infomation	\| phytochrome E \| Chr4:10042137-10046346 REVERSE LENGTH=3912 \| 201606
Sequence	CAAAATATGTTGAAATTTTGAAGGTCTATTAAATTTGAGAAAGACATTAGCCATTTCTTC AATAGATTCAGAGTAACAAAAAAATACTTATTCCATGGAACTTTTTTATTCACAAAAATA AAGCAATTTAAGAAAAGGGAAAAAAAATGAAAGTGAATCGGTGGTGGTCACCGAACAAGC TGTACGTGTGGGAGAGAATGCAAACAGAGTAGCAAAAAAAAAGCATTGAAGGAAGCAAAA CAAAACATGAAAAGAAGAATCTTGAGGTAAAAACGAATCCCAAATATCAAAAAGGAAACT TTTTTTACTTCTTTCTTTCTCTTGCTGCAAATGATACAGAATCAGCTTCTTCTTCTTCTT CTTCTGGTCGAAACTCACTCCACACTTTCCCCTAAGCTATGGGATTCGAGAGTTCAAGCT CAGCTGCAAGCAACATGAAACCTCAACCTCAAAAATCCAACACTGCTCAATACTCTGTTG ATGCTGCTCTCTTTGCTGATTTCGCTCAATCCATTTACACCGGCAAGTCTTTTAACTACT CCAAATCTGTTATTTCACCTCCCAATCACGTTCCTGATGAACACATCACAGCTTACTTGT CTAACATCCAAAGAGGCGGTCTAGTTCAGCCCTTTGGTTGTTTGATTGCTGTCGAAGAAC CTAGTTTTAGGATACTTGGTCTTAGTGACAACTCTTCTGACTTTCTTGGTTTGTTGTCTC TTCCTTCCACCTCCCATTCTGGTGAGTTTGATAAAGTCAAGGGTTTGATTGGAATCGATG CAAGGACGCTTTTTACTCCTTCCTCTGGAGCTTCTTTGTCTAAAGCTGCTTCCTTTACTG AGATTTCCTTGTTGAATCCTGTTTTGGTCCATTCTAGGACGACCCAGAAGCCTTTTTATG CTATTCTTCACAGGATTGATGCAGGGATTGTCATGGATTTGGAGCCTGCTAAATCAGGTG ATCCGGCTTTGACCCTTGCAGGCGCAGTTCAGTCTCAGAAGCTAGCCGTTAGGGCCATTT CTAGGCTGCAGTCACTTCCCGGAGGAGATATTGGTGCCTTGTGTGATACTGTTGTGGAAG ATGTTCAGAGACTTACCGGTTATGACCGTGTTATGGTCTATCAGTTTCATGAAGATGATC ATGGTGAAGTTGTTTCTGAGATTAGAAGGTCTGATTTGGAGCCTTATTTGGGTTTACATT ATCCGGCAACAGATATTCCTCAGGCTGCTCGGTTCTTGTTCAAACAGAACCGTGTCCGAA TGATTTGTGACTGCAATGCAACTCCGGTTAAGGTTGTTCAGAGTGAGGAACTCAAGAGAC CACTTTGTTTAGTTAATTCTACTCTAAGAGCTCCTCATGGCTGCCATACGCAGTATATGG CGAATATGGGCTCTGTAGCTTCTCTTGCACTCGCAATTGTAGTAAAAGGCAAAGATTCGA GCAAGCTTTGGGGATTAGTTGTTGGTCATCATTGTTCTCCTAGATACGTTCCATTCCCGT TGCGGTATGCTTGTGAGTTTCTGATGCAAGCATTTGGGCTTCAGCTTCAAATGGAACTTC AGTTAGCATCACAGTTAGCCGAGAAGAAGGCTATGCGGACGCAGACCTTGTTGTGCGATA TGCTTCTCCGTGATACTGTTTCCGCTATTGTTACACAATCTCCGGGTATTATGGACCTTG TGAAATGTGATGGAGCTGCGTTATATTACAAGGGGAAATGTTGGTTGGTTGGTGTTACTC CTAATGAGTCACAAGTTAAAGACTTGGTGAATTGGCTGGTGGAGAATCACGGTGATGATT CGACGGGTTTAACCACTGATAGTTTGGTGGATGCGGGATACCCTGGTGCCATCTCACTTG GAGATGCCGTTTGTGGTGTGGCTGCCGCAGGATTTTCTTCAAAAGATTACTTACTTTGGT TCAGGTCCAATACTGCAAGTGCAATCAAATGGGGAGGAGCTAAACATCATCCAAAGGATA AAGATGATGCCGGAAGAATGCATCCGAGGTCATCGTTTACAGCCTTTCTTGAAGTTGCGA AGAGCAGGAGCTTGCCGTGGGAAATCTCAGAAATTGATGCTATCCATTCCCTGAGACTTA TAATGAGAGAGTCATTTACCAGCTCTAGGCCAGTTTTGTCTGGTAATGGCGTAGCAAGAG ATGCTAATGAGCTTACTTCTTTTGTGTGTGAAATGGTTAGGGTGATTGAAACCGCAACTG CACCTATTTTTGGGGTTGATTCATCCGGATGTATTAATGGTTGGAACAAGAAAACCGCTG AAATGACGGGATTACTAGCTAGTGAAGCAATGGGGAAGTCACTTGCCGATGAGATTGTTC AAGAGGAATCACGCGCAGCTCTTGAAAGTCTCTTGTGCAAAGCCCTACAAGGTGAAGAGG AGAAAAGTGTAATGCTGAAACTGAGAAAGTTTGGTCAAAACAATCATCCGGATTATTCTT CTGATGTGTGTGTTCTCGTTAACTCCTGCACGAGTCGGGATTATACTGAAAATATCATCG GTGTCTGCTTCGTTGGTCAAGACATCACTAGTGAGAAAGCAATAACAGATAGATTCATCA GATTGCAAGGAGATTACAAGACTATTGTTCAAAGCTTAAATCCTTTGATTCCACCGATAT TTGCTTCAGATGAAAATGCTTGTTGTTCTGAGTGGAACGCAGCAATGGAAAAGCTTACGG GATGGTCAAAACACGAGGTGATTGGGAAAATGCTACCCGGTGAAGTCTTTGGAGTCTTTT GTAAAGTGAAATGCCAAGATTCGCTCACAAAGTTCTTGATCTCTCTGTACCAAGGAATTG CTGGTGATAATGTTCCCGAGAGTTCACTGGTTGAGTTCTTTAATAAGGAAGGGAAGTACA TAGAAGCATCCTTAACCGCGAACAAGAGTACAAACATCGAAGGAAAAGTTATAAGATGTT TCTTCTTCTTGCAGATTATCAATAAGGAATCGGGGTTGAGCTGCCCAGAACTGAAAGAGA GCGCTCAAAGCCTCAACGAATTAACTTACGTAAGACAAGAAATCAAGAATCCTCTCAACG GTATCCGATTTGCACATAAGCTTCTTGAATCCTCAGAGATTTCAGCTAGCCAAAGGCAGT TTCTGGAGACTAGTGATGCTTGTGAGAAGCAAATCACGACAATAATCGAAAGCACGGACT TGAAAAGCATTGAGGAAGGCAAGTTGCAATTGGAAACAGAAGAGTTTCGACTTGAAAACA TCTTGGACACAATCATTAGCCAAGTGATGATTATATTGAGAGAGAGGAACTCACAACTAA GGGTTGAAGTCGCCGAGGAGATCAAAACTCTGCCTCTCAATGGTGACAGAGTCAAGCTCC AGCTTATTCTTGCTGATCTTCTACGCAACATTGTGAATCATGCGCCGTTTCCAAATAGTT GGGTAGGTATCAGTATCTCACCAGGGCAGGAGCTTTCACGTGACAATGGTCGCTATATCC ATCTACAGTTCAGGATGATACATCCGGGGAAAGGACTTCCTTCAGAGATGCTAAGTGATA TGTTTGAGACTCGAGATGGATGGGTCACCCCTGATGGTTTAGGGCTTAAGCTTTCGCGGA AACTATTGGAGCAGATGAATGGCCGTGTGAGTTATGTCCGAGAAGACGAACGGTGTTTCT TTCAGGTGGATCTTCAAGTGAAGACAATGTTAGGTGTTGAGTCAAGAGGAACAGAGGGTA GTTCAAGCATAAAGTAGAAATTTTGAGTTACAAGGCTTATAAAATTTAATGAAATTTGGT CTCTTACCAAATGTATTAATTAGAACAAAGGTACATTATTTATTACCACCAATAAGATTG TATCTTAACTATCCTATGTATACAATTTGGAGAGATCATTTGGCCAACCAGACAAAAGTA AAACACAACCAT