Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G17880.1
CDS Infomation	\| Basic helix-loop-helix (bHLH) DNA-binding family protein \| Chr4:9933702-9935471 REVERSE LENGTH=1770 \| 201606
Sequence	ATGTCTCCGACGAATGTTCAAGTAACCGATTACCATCTCAACCAATCAAAAACGGATACA ACAAATCTCTGGTCAACCGACGACGATGCATCGGTAATGGAAGCTTTCATCGGCGGCGGC TCCGATCATTCTTCTCTTTTTCCTCCACTTCCTCCTCCTCCTCTTCCTCAAGTCAACGAA GATAATCTCCAGCAACGTCTCCAAGCTTTAATCGAAGGAGCAAACGAGAACTGGACTTAC GCCGTGTTCTGGCAATCATCTCACGGTTTCGCCGGAGAAGACAACAACAACAACAACACA GTGTTGTTAGGTTGGGGAGATGGTTATTACAAAGGAGAAGAAGAGAAGTCTAGAAAGAAG AAATCAAATCCAGCTAGTGCAGCTGAACAAGAGCATCGTAAGAGAGTGATTAGAGAGCTC AACTCTTTAATCTCCGGTGGTGTAGGAGGAGGAGATGAAGCTGGAGATGAAGAAGTTACA GATACTGAATGGTTCTTCTTAGTTTCAATGACACAGAGCTTTGTCAAGGGTACTGGTTTA CCTGGTCAAGCTTTCTCAAATTCAGACACGATTTGGTTATCTGGTTCTAATGCTTTAGCT GGATCAAGTTGTGAGAGAGCTCGTCAAGGTCAGATTTATGGGTTACAAACAATGGTGTGT GTAGCGACAGAGAATGGTGTCGTTGAGCTTGGTTCGTCGGAGATTATTCATCAAAGTTCA GATCTTGTTGATAAAGTTGACACCTTTTTCAATTTTAACAATGGTGGTGGTGAATTTGGT TCTTGGGCGTTTAATTTGAATCCAGATCAAGGAGAGAATGATCCAGGTTTGTGGATTAGT GAACCTAATGGTGTTGACTCTGGTCTTGTAGCTGCTCCGGTGATGAATAATGGTGGAAAT GACTCAACTTCTAATTCTGATTCTCAACCAATTTCTAAGCTTTGTAATGGAAGCTCTGTT GAAAACCCTAACCCTAAAGTTCTGAAATCTTGTGAAATGGTGAATTTCAAGAATGGGATT GAGAATGGTCAAGAAGAAGATAGTAGTAATAAGAAGAGATCACCGGTTTCGAATAATGAA GAAGGGATGCTTTCTTTTACCTCTGTTCTTCCATGTGACTCGAATCACTCTGATCTTGAA GCTTCAGTGGCTAAAGAAGCTGAGAGTAACAGAGTTGTGGTTGAACCGGAGAAGAAACCG AGGAAACGAGGGAGAAAACCGGCGAATGGAAGAGAAGAGCCTTTGAATCATGTAGAGGCA GAGAGACAGAGAAGAGAGAAGTTGAATCAGAGATTCTATTCTTTAAGAGCTGTGGTTCCT AATGTGTCTAAGATGGATAAAGCTTCTCTATTAGGAGATGCTATTTCGTATATCAGTGAG CTTAAGTCTAAGTTGCAAAAGGCTGAATCTGATAAAGAAGAGTTGCAGAAGCAGATTGAT GTGATGAATAAAGAAGCGGGAAATGCGAAAAGTTCGGTAAAAGATCGAAAATGTTTGAAT CAAGAATCGAGTGTGTTGATAGAGATGGAGGTTGATGTGAAGATTATTGGTTGGGATGCA ATGATAAGGATTCAATGTAGTAAGAGGAATCATCCTGGTGCTAAGTTCATGGAAGCACTT AAGGAGTTGGATTTGGAAGTGAATCATGCGAGTTTATCGGTAGTGAATGATCTTATGATC CAACAAGCGACTGTGAAAATGGGGAATCAGTTTTTCACGCAAGATCAACTCAAGGTTGCT CTAACGGAGAAAGTTGGAGAATGTCCATGA

Peptide Sequence

PEP ID	AT4G17880.1
PEP Infomation	\| Basic helix-loop-helix (bHLH) DNA-binding family protein \| Chr4:9933702-9935471 REVERSE LENGTH=589 \| 201606
Sequence	MSPTNVQVTDYHLNQSKTDTTNLWSTDDDASVMEAFIGGGSDHSSLFPPLPPPPLPQVNE DNLQQRLQALIEGANENWTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYKGEEEKSRKK KSNPASAAEQEHRKRVIRELNSLISGGVGGGDEAGDEEVTDTEWFFLVSMTQSFVKGTGL PGQAFSNSDTIWLSGSNALAGSSCERARQGQIYGLQTMVCVATENGVVELGSSEIIHQSS DLVDKVDTFFNFNNGGGEFGSWAFNLNPDQGENDPGLWISEPNGVDSGLVAAPVMNNGGN DSTSNSDSQPISKLCNGSSVENPNPKVLKSCEMVNFKNGIENGQEEDSSNKKRSPVSNNE EGMLSFTSVLPCDSNHSDLEASVAKEAESNRVVVEPEKKPRKRGRKPANGREEPLNHVEA ERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQID VMNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEAL KELDLEVNHASLSVVNDLMIQQATVKMGNQFFTQDQLKVALTEKVGECP

Transcript Sequence

Transcript ID	AT4G17880.1
Transcript Infomation	\| Basic helix-loop-helix (bHLH) DNA-binding family protein \| Chr4:9933326-9935685 REVERSE LENGTH=2360 \| 201606
Sequence	AAATAACTCAATCAATAATTCATATTTGGTGAAAATAAAAGTACTATTTCTTTTTCTTTA GAGTTAAAAAAAAAAAATGAATATAAACAGATTCCTTTTCCCGAAACAATCAAACCAAAC ACAAATATTTTGCTTAAAGAACTTACTTCTCTCCTCTGTCTCTCACCGGAAAAACAAAAA GTCTTCTCTTTTATAACTACGTCAGAGAACTGTTATGTCTCCGACGAATGTTCAAGTAAC CGATTACCATCTCAACCAATCAAAAACGGATACAACAAATCTCTGGTCAACCGACGACGA TGCATCGGTAATGGAAGCTTTCATCGGCGGCGGCTCCGATCATTCTTCTCTTTTTCCTCC ACTTCCTCCTCCTCCTCTTCCTCAAGTCAACGAAGATAATCTCCAGCAACGTCTCCAAGC TTTAATCGAAGGAGCAAACGAGAACTGGACTTACGCCGTGTTCTGGCAATCATCTCACGG TTTCGCCGGAGAAGACAACAACAACAACAACACAGTGTTGTTAGGTTGGGGAGATGGTTA TTACAAAGGAGAAGAAGAGAAGTCTAGAAAGAAGAAATCAAATCCAGCTAGTGCAGCTGA ACAAGAGCATCGTAAGAGAGTGATTAGAGAGCTCAACTCTTTAATCTCCGGTGGTGTAGG AGGAGGAGATGAAGCTGGAGATGAAGAAGTTACAGATACTGAATGGTTCTTCTTAGTTTC AATGACACAGAGCTTTGTCAAGGGTACTGGTTTACCTGGTCAAGCTTTCTCAAATTCAGA CACGATTTGGTTATCTGGTTCTAATGCTTTAGCTGGATCAAGTTGTGAGAGAGCTCGTCA AGGTCAGATTTATGGGTTACAAACAATGGTGTGTGTAGCGACAGAGAATGGTGTCGTTGA GCTTGGTTCGTCGGAGATTATTCATCAAAGTTCAGATCTTGTTGATAAAGTTGACACCTT TTTCAATTTTAACAATGGTGGTGGTGAATTTGGTTCTTGGGCGTTTAATTTGAATCCAGA TCAAGGAGAGAATGATCCAGGTTTGTGGATTAGTGAACCTAATGGTGTTGACTCTGGTCT TGTAGCTGCTCCGGTGATGAATAATGGTGGAAATGACTCAACTTCTAATTCTGATTCTCA ACCAATTTCTAAGCTTTGTAATGGAAGCTCTGTTGAAAACCCTAACCCTAAAGTTCTGAA ATCTTGTGAAATGGTGAATTTCAAGAATGGGATTGAGAATGGTCAAGAAGAAGATAGTAG TAATAAGAAGAGATCACCGGTTTCGAATAATGAAGAAGGGATGCTTTCTTTTACCTCTGT TCTTCCATGTGACTCGAATCACTCTGATCTTGAAGCTTCAGTGGCTAAAGAAGCTGAGAG TAACAGAGTTGTGGTTGAACCGGAGAAGAAACCGAGGAAACGAGGGAGAAAACCGGCGAA TGGAAGAGAAGAGCCTTTGAATCATGTAGAGGCAGAGAGACAGAGAAGAGAGAAGTTGAA TCAGAGATTCTATTCTTTAAGAGCTGTGGTTCCTAATGTGTCTAAGATGGATAAAGCTTC TCTATTAGGAGATGCTATTTCGTATATCAGTGAGCTTAAGTCTAAGTTGCAAAAGGCTGA ATCTGATAAAGAAGAGTTGCAGAAGCAGATTGATGTGATGAATAAAGAAGCGGGAAATGC GAAAAGTTCGGTAAAAGATCGAAAATGTTTGAATCAAGAATCGAGTGTGTTGATAGAGAT GGAGGTTGATGTGAAGATTATTGGTTGGGATGCAATGATAAGGATTCAATGTAGTAAGAG GAATCATCCTGGTGCTAAGTTCATGGAAGCACTTAAGGAGTTGGATTTGGAAGTGAATCA TGCGAGTTTATCGGTAGTGAATGATCTTATGATCCAACAAGCGACTGTGAAAATGGGGAA TCAGTTTTTCACGCAAGATCAACTCAAGGTTGCTCTAACGGAGAAAGTTGGAGAATGTCC ATGAATTGAAGTCAGCATCTTTAGGGCTAATACACCGGAGAATACTGCGAAAAGTCGAAA ACAACGATCATAGTATAAGCCGCGGTAAAAAGTGTTAAACCTTTCACACAAGTTTCTCTA GTGAATGTAGTTGTAAACTCTATTGTGTAAGGGTAATTTTGTAGTACCCACTTGTTGCTA TTGAATGCTTGTTAGAGAGGATTCTTAGTGTAGTATATGATTAGGTTGGGGTTTGTTGTT TCATGAGATAAATAAATGTGTTTGATCAATGGTTAAGTCTTTGGTTTGTTGGTGTATGTA TGTAAATAAGGCTTTTGTTAGAAATAAGACAAATGGGACTGAAGTTGGAGTTTTTTGTTG TCTTTTGAGTTAAAGTTTGA