Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G16960.1
CDS Infomation	\| disease resistance protein (TIR-NBS-LRR class) \| Chr4:9547429-9551007 REVERSE LENGTH=3006 \| 201606
Sequence	ATGGCTTCTTCTTCTTCTTCTCCTAGTAGCCGGAGATACGACGTTTTCCCAAGCTTCAGT GGGGTAGATGTTCGCAAAACGTTCCTCAGCCATCTAATCGAGGCGCTCGACCGCAGATCA ATCAATACATTCATGGATCACGGCATCGTGAGAAGCTGCATAATCGCCGATGAGCTTATA ACGGCCATTAGAGAAGCGAGGATCTCAATAGTTATCTTCTCTGAGAACTATGCTTCTTCC ACGTGGTGCTTGAATGAATTGGTGGAGATCCACAAGTGTCACAAGGACAAAGACTTGGAT CAAATGGTGATTCCGGTTTTCTACGGCGTTGATCCTTCTCATGTTAGAAAACAGATCGGT GGCTTTGGCGATGTCTTTAAAAAGACATGCGAGGACAAACCAGAGGATCAGAAACAAAGA TGGGTTAAAGCTCTCACAGATATATCAAATTTAGCCGGGGAGGATCTTCGGAACGGGCCT AGTGAAGCAGCCATGGTTGTAAAGATAGCTAATGATGTTTCGAATAAACTTTTTCCTCTG CCAAAGGGTTTTGGTGACTTAGTCGGAATTGAGGATCATATAGAGGCAATAAAATTAAAA CTGTGCTTGGAATCCAAGGAAGCTAGAATAATGGTCGGGATTTGGGGACAGTCAGGGATT GGTAAGAGTACTATAGGAAGAGCTCTTTTCAGTCAACTCTCTAGCCAGTTCCACCATCGC GCTTTCATAACTTATAAAAGCACCAGTGGTAGTGACGTCTCTGGCATGAAGTTGAGTTGG GAAAAAGAACTTCTCTCGGAAATCTTAGGTCAAAAGGACATAAAGATAGAGCATTTTGGT GTGGTGGAGCAAAGGTTGAAGCACAAGAAAGTTCTTATCCTTCTTGATGATGTGGATAAT CTAGAGTTTCTTAGGACCTTGGTGGGAAAAGCTGAATGGTTTGGATCTGGAAGCAGAATA ATTGTGATCACTCAAGATAGGCAACTTCTCAAGGCTCATGAGATTGACCTTATATATGAG GTGAAGCTCCCATCTCAAGGTCTTGCTCTTAAGATGATATGCCAATATGCTTTTGGGAAA TACTCTCCACCTGATGATTTTAAGGAACTAGCATTTGAAGTTGCAAAGCTTGCCGGTAAT CTTCCTTTGGGTCTCAGTGTCCTTGGTTCGTCTTTAAAACGAAGGAGCAAAGAAGAGTGG ATGGAGATGCTGGCTGAGCTCCAAAATGGTTTGAACAGAGATATTATGAAAACATTAAGA GTCAGCTACGTTAGATTAGATCCAAAAGATCAAGATATATTCCATTACATTGCATGGTTA TTCAATGGTTGGAAAGTCAAATCCATCAAAGACTTCCTCGGAGATGGTGTTAATGTTAAC ATTAGGCTCAAAACGTTGGATGATAAGTCCCTCATACGTTTAACACCGAATGATACTATA GAGATGCACAATTTGCTTCAGAAGTTGGCTACAGAAATTGATCGTGAAGAGTCTAATGGT AATCCTGGAAAACGTCGATTTCTGGAGAATGCTGAGGAAATTCTAGACGTATTTACCGAT AATACCGGGACTGAAAAATTGCTCGGAATACATTTCAGCGCGTCATCAGATTCACAAATA GATAAGCCATTTATTTCAATAGATGAAAACTCGTTCCAAGGCATGCTTAATCTCCAATAT CTAAAAATTCATGATCATTCATGGTGGCAACCGAGAGAAACCAGAATGCGTCTACCTAAC GGCCTCGTTTACTTGCCACGTAAACTCAAATGGCTATGGTGGGATAATTGTCCATTGAAG CGTTTGCCTTCTAATTTTAAGGCTGAGTATCTGGTTGAACTCAGAATGGTGAATAGTGAC CTTGAGAAGCTGTGGAATGGAACTCAGCTACTTGGAAGCCTAAAGAAGATGATTCTGCGT AATTCCAAATATTTGAAAGAAATTCCAGATCTTTCTTATGCCATGAACCTCGAGAGATTA GATATTTCTGATTGCGAAGTGCTAGAAAGTTTTCCAAGTCCTCTCAACTCGGAATCTCTC GAGTACCTCGATCTCCTACGATGCCCCAAGTTGAGAAATTTCCCTGAGACTATAATGCAA ATTTCCCCATATGGAATTGACATCGACGTAGCAGATTGTTTATGGAACAAGAGTCTCCCT GGACTAGATTATCTCGATTGCCTTAGGAGATGTAATCCAAGTAAATTTCTACCAGAACAT CTCGTTAATCTCAAACTGAGAGGCAACAACATGCTTGAGAAGCTATGGGAAGGCGTCCAG TCCCTTGGGAAACTTGAGAGGATGGATCTGTCAGAATGTGAAAACCTGATAGAAATTCCA GATCTTTCAAAGGCCACCAATCTGGTGAATTTGAACCTCTCAAATTGCAAAAGTTTGGTG ACGTTACCTTCTACAATTGGGAATCACCAAAAACTATACACGTTAGAAATGAAAGAATGC ACAGGGCTGAAGGTTCTTCCTATGGATGTCAACTTGTCATCTCTCCATACAGTCAATCTC AAAGGGTGCTCAAGTTTGAGATTTTTCCCTCAAATTTCAAAAAGTATTGCTGTACTCAAT CTAGATGACACTGCCATTGAAGAAGTTCCATGTTTTGAGAATTTCTCGAGGCTCATTGTA TTATCGATGCGTGGTTGCAAGTCGTTGAGAAGATTTCCTCAGATTTCAACTAGTATTCAA GAACTCAATCTAGCTGACACCGCCATTGAACAAGTTCCTTGCTTCATTGAGAATTTTTCG AAGCTCAAGATACTAAATATGAGTGGTTGCAAAAAGTTGAAAAACATCTCCCCGAACATT TTCAGACTGACTTGGCTTAAGAAGGTCGACTTTACAGACTGTGGAGGTGTCATTTCGGCG TTGAGTGATTCCACTGTGGTGGCAACAATGGATGATCACTATGAAAAGATTGAAAAGATG CGTACACGAGACGATGATGTTGAGGATGACTATAATGAGGATGACGAGAATGAGGATGAG TTATGA

Peptide Sequence

PEP ID	AT4G16960.1
PEP Infomation	\| disease resistance protein (TIR-NBS-LRR class) \| Chr4:9547429-9551007 REVERSE LENGTH=1001 \| 201606
Sequence	MASSSSSPSSRRYDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADELI TAIREARISIVIFSENYASSTWCLNELVEIHKCHKDKDLDQMVIPVFYGVDPSHVRKQIG GFGDVFKKTCEDKPEDQKQRWVKALTDISNLAGEDLRNGPSEAAMVVKIANDVSNKLFPL PKGFGDLVGIEDHIEAIKLKLCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHR AFITYKSTSGSDVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRLKHKKVLILLDDVDN LEFLRTLVGKAEWFGSGSRIIVITQDRQLLKAHEIDLIYEVKLPSQGLALKMICQYAFGK YSPPDDFKELAFEVAKLAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLNRDIMKTLR VSYVRLDPKDQDIFHYIAWLFNGWKVKSIKDFLGDGVNVNIRLKTLDDKSLIRLTPNDTI EMHNLLQKLATEIDREESNGNPGKRRFLENAEEILDVFTDNTGTEKLLGIHFSASSDSQI DKPFISIDENSFQGMLNLQYLKIHDHSWWQPRETRMRLPNGLVYLPRKLKWLWWDNCPLK RLPSNFKAEYLVELRMVNSDLEKLWNGTQLLGSLKKMILRNSKYLKEIPDLSYAMNLERL DISDCEVLESFPSPLNSESLEYLDLLRCPKLRNFPETIMQISPYGIDIDVADCLWNKSLP GLDYLDCLRRCNPSKFLPEHLVNLKLRGNNMLEKLWEGVQSLGKLERMDLSECENLIEIP DLSKATNLVNLNLSNCKSLVTLPSTIGNHQKLYTLEMKECTGLKVLPMDVNLSSLHTVNL KGCSSLRFFPQISKSIAVLNLDDTAIEEVPCFENFSRLIVLSMRGCKSLRRFPQISTSIQ ELNLADTAIEQVPCFIENFSKLKILNMSGCKKLKNISPNIFRLTWLKKVDFTDCGGVISA LSDSTVVATMDDHYEKIEKMRTRDDDVEDDYNEDDENEDEL

Transcript Sequence

Transcript ID	AT4G16960.1
Transcript Infomation	\| disease resistance protein (TIR-NBS-LRR class) \| Chr4:9547402-9551028 REVERSE LENGTH=3054 \| 201606
Sequence	GAGTTCTCTCTATCGTCTCCCATGGCTTCTTCTTCTTCTTCTCCTAGTAGCCGGAGATAC GACGTTTTCCCAAGCTTCAGTGGGGTAGATGTTCGCAAAACGTTCCTCAGCCATCTAATC GAGGCGCTCGACCGCAGATCAATCAATACATTCATGGATCACGGCATCGTGAGAAGCTGC ATAATCGCCGATGAGCTTATAACGGCCATTAGAGAAGCGAGGATCTCAATAGTTATCTTC TCTGAGAACTATGCTTCTTCCACGTGGTGCTTGAATGAATTGGTGGAGATCCACAAGTGT CACAAGGACAAAGACTTGGATCAAATGGTGATTCCGGTTTTCTACGGCGTTGATCCTTCT CATGTTAGAAAACAGATCGGTGGCTTTGGCGATGTCTTTAAAAAGACATGCGAGGACAAA CCAGAGGATCAGAAACAAAGATGGGTTAAAGCTCTCACAGATATATCAAATTTAGCCGGG GAGGATCTTCGGAACGGGCCTAGTGAAGCAGCCATGGTTGTAAAGATAGCTAATGATGTT TCGAATAAACTTTTTCCTCTGCCAAAGGGTTTTGGTGACTTAGTCGGAATTGAGGATCAT ATAGAGGCAATAAAATTAAAACTGTGCTTGGAATCCAAGGAAGCTAGAATAATGGTCGGG ATTTGGGGACAGTCAGGGATTGGTAAGAGTACTATAGGAAGAGCTCTTTTCAGTCAACTC TCTAGCCAGTTCCACCATCGCGCTTTCATAACTTATAAAAGCACCAGTGGTAGTGACGTC TCTGGCATGAAGTTGAGTTGGGAAAAAGAACTTCTCTCGGAAATCTTAGGTCAAAAGGAC ATAAAGATAGAGCATTTTGGTGTGGTGGAGCAAAGGTTGAAGCACAAGAAAGTTCTTATC CTTCTTGATGATGTGGATAATCTAGAGTTTCTTAGGACCTTGGTGGGAAAAGCTGAATGG TTTGGATCTGGAAGCAGAATAATTGTGATCACTCAAGATAGGCAACTTCTCAAGGCTCAT GAGATTGACCTTATATATGAGGTGAAGCTCCCATCTCAAGGTCTTGCTCTTAAGATGATA TGCCAATATGCTTTTGGGAAATACTCTCCACCTGATGATTTTAAGGAACTAGCATTTGAA GTTGCAAAGCTTGCCGGTAATCTTCCTTTGGGTCTCAGTGTCCTTGGTTCGTCTTTAAAA CGAAGGAGCAAAGAAGAGTGGATGGAGATGCTGGCTGAGCTCCAAAATGGTTTGAACAGA GATATTATGAAAACATTAAGAGTCAGCTACGTTAGATTAGATCCAAAAGATCAAGATATA TTCCATTACATTGCATGGTTATTCAATGGTTGGAAAGTCAAATCCATCAAAGACTTCCTC GGAGATGGTGTTAATGTTAACATTAGGCTCAAAACGTTGGATGATAAGTCCCTCATACGT TTAACACCGAATGATACTATAGAGATGCACAATTTGCTTCAGAAGTTGGCTACAGAAATT GATCGTGAAGAGTCTAATGGTAATCCTGGAAAACGTCGATTTCTGGAGAATGCTGAGGAA ATTCTAGACGTATTTACCGATAATACCGGGACTGAAAAATTGCTCGGAATACATTTCAGC GCGTCATCAGATTCACAAATAGATAAGCCATTTATTTCAATAGATGAAAACTCGTTCCAA GGCATGCTTAATCTCCAATATCTAAAAATTCATGATCATTCATGGTGGCAACCGAGAGAA ACCAGAATGCGTCTACCTAACGGCCTCGTTTACTTGCCACGTAAACTCAAATGGCTATGG TGGGATAATTGTCCATTGAAGCGTTTGCCTTCTAATTTTAAGGCTGAGTATCTGGTTGAA CTCAGAATGGTGAATAGTGACCTTGAGAAGCTGTGGAATGGAACTCAGCTACTTGGAAGC CTAAAGAAGATGATTCTGCGTAATTCCAAATATTTGAAAGAAATTCCAGATCTTTCTTAT GCCATGAACCTCGAGAGATTAGATATTTCTGATTGCGAAGTGCTAGAAAGTTTTCCAAGT CCTCTCAACTCGGAATCTCTCGAGTACCTCGATCTCCTACGATGCCCCAAGTTGAGAAAT TTCCCTGAGACTATAATGCAAATTTCCCCATATGGAATTGACATCGACGTAGCAGATTGT TTATGGAACAAGAGTCTCCCTGGACTAGATTATCTCGATTGCCTTAGGAGATGTAATCCA AGTAAATTTCTACCAGAACATCTCGTTAATCTCAAACTGAGAGGCAACAACATGCTTGAG AAGCTATGGGAAGGCGTCCAGTCCCTTGGGAAACTTGAGAGGATGGATCTGTCAGAATGT GAAAACCTGATAGAAATTCCAGATCTTTCAAAGGCCACCAATCTGGTGAATTTGAACCTC TCAAATTGCAAAAGTTTGGTGACGTTACCTTCTACAATTGGGAATCACCAAAAACTATAC ACGTTAGAAATGAAAGAATGCACAGGGCTGAAGGTTCTTCCTATGGATGTCAACTTGTCA TCTCTCCATACAGTCAATCTCAAAGGGTGCTCAAGTTTGAGATTTTTCCCTCAAATTTCA AAAAGTATTGCTGTACTCAATCTAGATGACACTGCCATTGAAGAAGTTCCATGTTTTGAG AATTTCTCGAGGCTCATTGTATTATCGATGCGTGGTTGCAAGTCGTTGAGAAGATTTCCT CAGATTTCAACTAGTATTCAAGAACTCAATCTAGCTGACACCGCCATTGAACAAGTTCCT TGCTTCATTGAGAATTTTTCGAAGCTCAAGATACTAAATATGAGTGGTTGCAAAAAGTTG AAAAACATCTCCCCGAACATTTTCAGACTGACTTGGCTTAAGAAGGTCGACTTTACAGAC TGTGGAGGTGTCATTTCGGCGTTGAGTGATTCCACTGTGGTGGCAACAATGGATGATCAC TATGAAAAGATTGAAAAGATGCGTACACGAGACGATGATGTTGAGGATGACTATAATGAG GATGACGAGAATGAGGATGAGTTATGACAAGAATGAGGATGAGGATGAGTATAA