Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G16390.1
CDS Infomation	\| pentatricopeptide (PPR) repeat-containing protein \| Chr4:9257985-9260093 FORWARD LENGTH=2109 \| 201606
Sequence	ATGTCATTTCATCATCTATGTTCCTCTCCCTCGTCTCTTCTACATGACCCTCTTCCTCTC TGCAATCTTCTCTCAGTGTATCCCAAATCCACACCAAGAAGTTTCCTCTCCTCTTACAAT CCCAATTCTTCTCATTTCCACTCCAGAAACCTTCTCCAAGCAACCCATGTTTCAGTACAA GAAGCGATTCCACAGAGTGAAAAATCCAAACTTGTTGATGTAGATCTTCCTATACCAGAA CCTACTGCTTCCAAAAGCTACGTCTGGGTTAATCCCAAAAGCCCCAGAGCTTCTCAGCTC CGTAGAAAATCTTACGATTCGAGGTACTCTTCTCTTATCAAACTAGCTGAGTCTCTTGAC GCGTGTAAGCCAAACGAAGCTGATGTTTGCGATGTCATTACTGGGTTTGGTGGTAAATTG TTTGAGCAAGATGCTGTTGTTACTCTCAATAACATGACTAACCCAGAAACTGCGCCACTT GTGTTGAATAATCTCTTGGAGACGATGAAACCTAGCAGGGAAGTGATTCTCTACAATGTT ACCATGAAGGTGTTTAGGAAAAGCAAGGATCTTGAAAAGTCAGAGAAGCTGTTCGATGAA ATGCTTGAGAGAGGGATTAAACCGGATAATGCAACTTTCACTACGATAATTAGTTGTGCT AGGCAGAATGGTGTACCTAAGAGAGCTGTTGAGTGGTTTGAGAAAATGTCTTCTTTTGGA TGTGAGCCTGATAATGTCACTATGGCTGCTATGATTGATGCTTACGGGCGTGCTGGTAAC GTTGACATGGCTTTGAGTTTGTATGATCGAGCAAGGACTGAGAAATGGCGTATTGACGCT GTTACTTTTTCGACTTTGATTAGGATTTATGGTGTTTCTGGAAACTATGATGGGTGTCTC AATATCTATGAAGAAATGAAGGCTCTTGGGGTGAAGCCTAATCTGGTTATTTACAATAGG TTGATAGATTCTATGGGTAGAGCCAAGAGGCCTTGGCAGGCTAAAATTATCTACAAGGAT CTTATTACCAATGGCTTTACTCCCAATTGGAGTACTTATGCTGCTCTTGTTAGAGCCTAT GGTAGAGCTCGTTATGGCGATGATGCACTTGCTATCTACCGAGAGATGAAGGAGAAGGGA TTGTCTTTAACTGTGATTCTTTACAATACTCTCTTGTCCATGTGTGCTGATAATCGATAT GTTGATGAGGCTTTTGAGATTTTTCAAGATATGAAGAATTGTGAGACTTGTGATCCGGAC AGCTGGACCTTCTCTTCGTTGATCACTGTGTACGCTTGTAGTGGGAGGGTTTCAGAGGCC GAGGCGGCTCTTCTTCAAATGAGAGAAGCTGGTTTTGAGCCTACTCTTTTTGTTCTGACG TCAGTTATCCAGTGTTATGGGAAAGCCAAGCAGGTAGATGATGTTGTGAGGACATTCGAT CAAGTGTTGGAACTGGGTATAACTCCGGACGACAGATTTTGTGGGTGTCTTCTGAATGTA ATGACCCAGACACCGAGTGAGGAAATCGGTAAACTCATTGGCTGTGTCGAGAAGGCTAAG CCAAAGCTTGGTCAAGTGGTTAAGATGTTGGTCGAGGAGCAAAACTGCGAGGAAGGGGTG TTCAAGAAGGAAGCATCTGAGTTGATTGATTCCATTGGATCTGATGTAAAGAAAGCATAT TTGAATTGCTTGATTGATCTCTGTGTCAATCTCAATAAGTTGGAAAGAGCTTGTGAGATC CTACAACTAGGACTTGAGTATGACATTTATACGGGTCTTCAATCAAAATCTGCTACCCAA TGGTCCTTACATCTAAAAAGTCTCTCTTTGGGGGCAGCTTTGACCGCTCTTCATGTTTGG ATGAATGACTTATCAGAAGCGGCTCTTGAATCCGGTGAAGAGTTCCCTCCGTTGCTTGGA ATCAACACTGGACATGGAAAACACAAATACTCAGACAAAGGTCTAGCAGCTGTTTTCGAG TCTCACTTGAAGGAGCTAAATGCTCCTTTCCATGAAGCCCCAGATAAGGTTGGCTGGTTT TTGACTACCAGTGTTGCGGCAAAGGCATGGTTGGAGTCTAGACGCTCAGCTGGAGGAGTT TCTGCGTAG

Peptide Sequence

PEP ID	AT4G16390.1
PEP Infomation	\| pentatricopeptide (PPR) repeat-containing protein \| Chr4:9257985-9260093 FORWARD LENGTH=702 \| 201606
Sequence	MSFHHLCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQ EAIPQSEKSKLVDVDLPIPEPTASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA

Transcript Sequence

Transcript ID	AT4G16390.1
Transcript Infomation	\| pentatricopeptide (PPR) repeat-containing protein \| Chr4:9257869-9260328 FORWARD LENGTH=2460 \| 201606
Sequence	ACAGAAACACTAAAACAACACATTTCGTCTCTATCATTCTTTTTCTTCTACAAAGTTGCA GAGACTGTTGGATAAGGTCTCGAGGCTGCAACTGCGAACAAAGTACCCACAAAAAAATGT CATTTCATCATCTATGTTCCTCTCCCTCGTCTCTTCTACATGACCCTCTTCCTCTCTGCA ATCTTCTCTCAGTGTATCCCAAATCCACACCAAGAAGTTTCCTCTCCTCTTACAATCCCA ATTCTTCTCATTTCCACTCCAGAAACCTTCTCCAAGCAACCCATGTTTCAGTACAAGAAG CGATTCCACAGAGTGAAAAATCCAAACTTGTTGATGTAGATCTTCCTATACCAGAACCTA CTGCTTCCAAAAGCTACGTCTGGGTTAATCCCAAAAGCCCCAGAGCTTCTCAGCTCCGTA GAAAATCTTACGATTCGAGGTACTCTTCTCTTATCAAACTAGCTGAGTCTCTTGACGCGT GTAAGCCAAACGAAGCTGATGTTTGCGATGTCATTACTGGGTTTGGTGGTAAATTGTTTG AGCAAGATGCTGTTGTTACTCTCAATAACATGACTAACCCAGAAACTGCGCCACTTGTGT TGAATAATCTCTTGGAGACGATGAAACCTAGCAGGGAAGTGATTCTCTACAATGTTACCA TGAAGGTGTTTAGGAAAAGCAAGGATCTTGAAAAGTCAGAGAAGCTGTTCGATGAAATGC TTGAGAGAGGGATTAAACCGGATAATGCAACTTTCACTACGATAATTAGTTGTGCTAGGC AGAATGGTGTACCTAAGAGAGCTGTTGAGTGGTTTGAGAAAATGTCTTCTTTTGGATGTG AGCCTGATAATGTCACTATGGCTGCTATGATTGATGCTTACGGGCGTGCTGGTAACGTTG ACATGGCTTTGAGTTTGTATGATCGAGCAAGGACTGAGAAATGGCGTATTGACGCTGTTA CTTTTTCGACTTTGATTAGGATTTATGGTGTTTCTGGAAACTATGATGGGTGTCTCAATA TCTATGAAGAAATGAAGGCTCTTGGGGTGAAGCCTAATCTGGTTATTTACAATAGGTTGA TAGATTCTATGGGTAGAGCCAAGAGGCCTTGGCAGGCTAAAATTATCTACAAGGATCTTA TTACCAATGGCTTTACTCCCAATTGGAGTACTTATGCTGCTCTTGTTAGAGCCTATGGTA GAGCTCGTTATGGCGATGATGCACTTGCTATCTACCGAGAGATGAAGGAGAAGGGATTGT CTTTAACTGTGATTCTTTACAATACTCTCTTGTCCATGTGTGCTGATAATCGATATGTTG ATGAGGCTTTTGAGATTTTTCAAGATATGAAGAATTGTGAGACTTGTGATCCGGACAGCT GGACCTTCTCTTCGTTGATCACTGTGTACGCTTGTAGTGGGAGGGTTTCAGAGGCCGAGG CGGCTCTTCTTCAAATGAGAGAAGCTGGTTTTGAGCCTACTCTTTTTGTTCTGACGTCAG TTATCCAGTGTTATGGGAAAGCCAAGCAGGTAGATGATGTTGTGAGGACATTCGATCAAG TGTTGGAACTGGGTATAACTCCGGACGACAGATTTTGTGGGTGTCTTCTGAATGTAATGA CCCAGACACCGAGTGAGGAAATCGGTAAACTCATTGGCTGTGTCGAGAAGGCTAAGCCAA AGCTTGGTCAAGTGGTTAAGATGTTGGTCGAGGAGCAAAACTGCGAGGAAGGGGTGTTCA AGAAGGAAGCATCTGAGTTGATTGATTCCATTGGATCTGATGTAAAGAAAGCATATTTGA ATTGCTTGATTGATCTCTGTGTCAATCTCAATAAGTTGGAAAGAGCTTGTGAGATCCTAC AACTAGGACTTGAGTATGACATTTATACGGGTCTTCAATCAAAATCTGCTACCCAATGGT CCTTACATCTAAAAAGTCTCTCTTTGGGGGCAGCTTTGACCGCTCTTCATGTTTGGATGA ATGACTTATCAGAAGCGGCTCTTGAATCCGGTGAAGAGTTCCCTCCGTTGCTTGGAATCA ACACTGGACATGGAAAACACAAATACTCAGACAAAGGTCTAGCAGCTGTTTTCGAGTCTC ACTTGAAGGAGCTAAATGCTCCTTTCCATGAAGCCCCAGATAAGGTTGGCTGGTTTTTGA CTACCAGTGTTGCGGCAAAGGCATGGTTGGAGTCTAGACGCTCAGCTGGAGGAGTTTCTG CGTAGCTCTTGTAATTGGTATGTAGCTTTGATATTGTCTATGTGGCTTCGAGCTTTCTCC ACTATTTAGCTTTCTTTCTCCTGATACCGGATACTGGATCAGGAAAGATTTTGTAATGCT AGCAAACTCGGGTTATACACATTTTGAAACAATTTAGAGAACTGATTAAGTTTCATTCTC CTTAGTTTCATTTCATGGTCTTCTCTGCATATCCTTCTATTGACTTTAATACTGGGGCGG