Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G15560.1
CDS Infomation	\| Deoxyxylulose-5-phosphate synthase \| Chr4:8884218-8887254 FORWARD LENGTH=2154 \| 201606
Sequence	ATGGCTTCTTCTGCATTTGCTTTTCCTTCTTACATAATAACCAAAGGAGGACTTTCAACT GATTCTTGTAAATCAACTTCTTTGTCTTCTTCTAGATCTTTGGTTACAGATCTTCCATCA CCATGTCTGAAACCCAACAACAATTCCCATTCAAACAGAAGAGCAAAAGTGTGTGCTTCA CTTGCAGAGAAGGGTGAATATTATTCAAACAGACCACCAACTCCATTACTTGACACTATT AACTACCCAATCCACATGAAAAATCTTTCTGTCAAGGAACTGAAACAACTTTCTGATGAG CTGAGATCAGACGTGATCTTTAATGTGTCGAAAACCGGTGGACATTTGGGGTCAAGTCTT GGTGTTGTGGAGCTTACTGTGGCTCTTCATTACATTTTCAATACTCCACAAGACAAGATT CTTTGGGATGTTGGTCATCAGTCTTATCCTCATAAGATTCTTACTGGGAGAAGAGGAAAG ATGCCTACAATGAGGCAAACCAATGGTCTCTCTGGTTTCACCAAACGAGGAGAGAGTGAA CATGATTGCTTTGGTACTGGACACAGCTCAACCACAATATCTGCTGGTTTAGGAATGGCG GTAGGAAGGGATTTGAAGGGGAAGAACAACAATGTGGTTGCTGTGATTGGTGATGGTGCG ATGACGGCAGGACAGGCTTATGAAGCCATGAACAACGCCGGATATCTAGACTCTGATATG ATTGTGATTCTTAATGACAACAAGCAAGTCTCATTACCTACAGCTACTTTGGATGGACCA AGTCCACCTGTTGGTGCATTGAGCAGTGCTCTTAGTCGGTTACAGTCTAACCCGGCTCTC AGAGAGTTGAGAGAAGTCGCAAAGGGTATGACAAAGCAAATAGGCGGACCAATGCATCAG TTGGCGGCTAAGGTAGATGAGTATGCTCGAGGAATGATAAGCGGGACTGGATCGTCACTG TTTGAAGAACTCGGTCTTTACTATATTGGTCCAGTTGATGGGCACAACATAGATGATTTG GTAGCCATTCTTAAAGAAGTTAAGAGTACCAGAACCACAGGACCTGTACTTATTCATGTG GTGACGGAGAAAGGTCGTGGTTATCCTTACGCGGAGAGAGCTGATGACAAATACCATGGT GTTGTGAAATTTGATCCAGCAACGGGTAGACAGTTCAAAACTACTAATAAGACTCAATCT TACACAACTTACTTTGCGGAGGCATTAGTCGCAGAAGCAGAGGTAGACAAAGATGTGGTT GCGATTCATGCAGCCATGGGAGGTGGAACCGGGTTAAATCTCTTTCAACGTCGCTTCCCA ACAAGATGTTTCGATGTAGGAATAGCGGAACAACACGCAGTTACTTTTGCTGCGGGTTTA GCCTGTGAAGGCCTTAAACCCTTCTGTGCAATCTATTCGTCTTTCATGCAGCGTGCTTAT GACCAGGTTGTCCATGATGTTGATTTGCAAAAATTACCGGTGAGATTTGCAATGGATAGA GCTGGACTCGTTGGAGCTGATGGTCCGACACATTGTGGAGCTTTCGATGTGACATTTATG GCTTGTCTTCCTAACATGATAGTGATGGCTCCATCAGATGAAGCAGATCTCTTTAACATG GTTGCAACTGCTGTTGCGATTGATGATCGTCCTTCTTGTTTCCGTTACCCTAGAGGTAAC GGTATTGGAGTTGCATTACCTCCCGGAAACAAAGGTGTTCCAATTGAGATTGGGAAAGGT AGAATTTTAAAGGAAGGAGAGAGAGTTGCGTTGTTGGGTTATGGCTCAGCAGTTCAGAGC TGTTTAGGAGCGGCTGTAATGCTCGAAGAACGCGGATTAAACGTAACTGTAGCGGATGCA CGGTTTTGCAAGCCATTGGACCGTGCTCTCATTCGCAGCTTAGCTAAGTCGCACGAGGTT CTGATCACGGTTGAAGAAGGTTCCATTGGAGGTTTTGGCTCGCACGTTGTTCAGTTTCTT GCTCTCGATGGTCTTCTTGATGGCAAACTCAAGTGGAGACCAATGGTACTGCCTGATCGA TACATTGATCACGGTGCACCAGCTGATCAACTAGCTGAAGCTGGACTCATGCCATCTCAC ATCGCAGCAACCGCACTTAACTTAATCGGTGCACCAAGGGAAGCTCTGTTTTGA

Peptide Sequence

PEP ID	AT4G15560.1
PEP Infomation	\| Deoxyxylulose-5-phosphate synthase \| Chr4:8884218-8887254 FORWARD LENGTH=717 \| 201606
Sequence	MASSAFAFPSYIITKGGLSTDSCKSTSLSSSRSLVTDLPSPCLKPNNNSHSNRRAKVCAS LAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSL GVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESE HDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM IVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQ LAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHV VTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVV AIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNM VATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQS CLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL ALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREALF

Transcript Sequence

Transcript ID	AT4G15560.1
Transcript Infomation	\| Deoxyxylulose-5-phosphate synthase \| Chr4:8883825-8887667 FORWARD LENGTH=2960 \| 201606
Sequence	CGTGGCCCAACCAAAATCTCAAGTTCTCTGCGGATGACGAACCATCTCACCATCTCTTTT TTTCTCTCTCTTTTTTTTTTTTAATATCATCAGCACGGTTACATAAAATTCGTGATCCAT GAAGTTGGCTTTCTTGTCGTTTTACTTCATCACCCCATTTTTTTAAAGTCTCCATCTTTA TACTTCTTCAACTCTCCACCACCACCATTGTCACCACCACATTTAAACACACACTTTCAC TTGTAGTGGGATTCGAAAGTGCGTTTTATTCATTTGTTTTACTGTTTTTGATAACCTCAA AATTTGCCTAAATTTTATTCTCTATAAATCCTTATATGTTTTACTTACATTCCTAAAGTT TTCAACTTTCTTGAGCTTCAAAAAGTACCTCCAATGGCTTCTTCTGCATTTGCTTTTCCT TCTTACATAATAACCAAAGGAGGACTTTCAACTGATTCTTGTAAATCAACTTCTTTGTCT TCTTCTAGATCTTTGGTTACAGATCTTCCATCACCATGTCTGAAACCCAACAACAATTCC CATTCAAACAGAAGAGCAAAAGTGTGTGCTTCACTTGCAGAGAAGGGTGAATATTATTCA AACAGACCACCAACTCCATTACTTGACACTATTAACTACCCAATCCACATGAAAAATCTT TCTGTCAAGGAACTGAAACAACTTTCTGATGAGCTGAGATCAGACGTGATCTTTAATGTG TCGAAAACCGGTGGACATTTGGGGTCAAGTCTTGGTGTTGTGGAGCTTACTGTGGCTCTT CATTACATTTTCAATACTCCACAAGACAAGATTCTTTGGGATGTTGGTCATCAGTCTTAT CCTCATAAGATTCTTACTGGGAGAAGAGGAAAGATGCCTACAATGAGGCAAACCAATGGT CTCTCTGGTTTCACCAAACGAGGAGAGAGTGAACATGATTGCTTTGGTACTGGACACAGC TCAACCACAATATCTGCTGGTTTAGGAATGGCGGTAGGAAGGGATTTGAAGGGGAAGAAC AACAATGTGGTTGCTGTGATTGGTGATGGTGCGATGACGGCAGGACAGGCTTATGAAGCC ATGAACAACGCCGGATATCTAGACTCTGATATGATTGTGATTCTTAATGACAACAAGCAA GTCTCATTACCTACAGCTACTTTGGATGGACCAAGTCCACCTGTTGGTGCATTGAGCAGT GCTCTTAGTCGGTTACAGTCTAACCCGGCTCTCAGAGAGTTGAGAGAAGTCGCAAAGGGT ATGACAAAGCAAATAGGCGGACCAATGCATCAGTTGGCGGCTAAGGTAGATGAGTATGCT CGAGGAATGATAAGCGGGACTGGATCGTCACTGTTTGAAGAACTCGGTCTTTACTATATT GGTCCAGTTGATGGGCACAACATAGATGATTTGGTAGCCATTCTTAAAGAAGTTAAGAGT ACCAGAACCACAGGACCTGTACTTATTCATGTGGTGACGGAGAAAGGTCGTGGTTATCCT TACGCGGAGAGAGCTGATGACAAATACCATGGTGTTGTGAAATTTGATCCAGCAACGGGT AGACAGTTCAAAACTACTAATAAGACTCAATCTTACACAACTTACTTTGCGGAGGCATTA GTCGCAGAAGCAGAGGTAGACAAAGATGTGGTTGCGATTCATGCAGCCATGGGAGGTGGA ACCGGGTTAAATCTCTTTCAACGTCGCTTCCCAACAAGATGTTTCGATGTAGGAATAGCG GAACAACACGCAGTTACTTTTGCTGCGGGTTTAGCCTGTGAAGGCCTTAAACCCTTCTGT GCAATCTATTCGTCTTTCATGCAGCGTGCTTATGACCAGGTTGTCCATGATGTTGATTTG CAAAAATTACCGGTGAGATTTGCAATGGATAGAGCTGGACTCGTTGGAGCTGATGGTCCG ACACATTGTGGAGCTTTCGATGTGACATTTATGGCTTGTCTTCCTAACATGATAGTGATG GCTCCATCAGATGAAGCAGATCTCTTTAACATGGTTGCAACTGCTGTTGCGATTGATGAT CGTCCTTCTTGTTTCCGTTACCCTAGAGGTAACGGTATTGGAGTTGCATTACCTCCCGGA AACAAAGGTGTTCCAATTGAGATTGGGAAAGGTAGAATTTTAAAGGAAGGAGAGAGAGTT GCGTTGTTGGGTTATGGCTCAGCAGTTCAGAGCTGTTTAGGAGCGGCTGTAATGCTCGAA GAACGCGGATTAAACGTAACTGTAGCGGATGCACGGTTTTGCAAGCCATTGGACCGTGCT CTCATTCGCAGCTTAGCTAAGTCGCACGAGGTTCTGATCACGGTTGAAGAAGGTTCCATT GGAGGTTTTGGCTCGCACGTTGTTCAGTTTCTTGCTCTCGATGGTCTTCTTGATGGCAAA CTCAAGTGGAGACCAATGGTACTGCCTGATCGATACATTGATCACGGTGCACCAGCTGAT CAACTAGCTGAAGCTGGACTCATGCCATCTCACATCGCAGCAACCGCACTTAACTTAATC GGTGCACCAAGGGAAGCTCTGTTTTGAGAGTAAGAATCTGTTGGCTAAAACATATGTATA CAAACACTCTAAATGCAACCCAAGGTTTCTTCTAAGTACTGATCAGAATTCCCGCCGAGA AGTCCTTTGGCAACAGCTATATATATTTACTAAGATTGTGAAGAGAAAGGCAAAGGCAAA GGTTGTGCAAAGATTAGTATTATGATAAAACTGGTATTTGTTTTGTAATTTTGTTTAGGA TTGTGATGGAGATCGTGTTGTACAATAATCTAACATCTTGTAAAAATCAATTACATCTCT TTGTGTATCTTTCATAGCTTTGTGTGACATATTTTGGTACGAGCAGTGTTTTTAAACCTG GACCTATATATATGGCCTCATTGACTGACGATCGAACGTACCAATGCAGTGACCCGAACC ACTTTCCGGTTTACATTCCA