Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G12570.1
CDS Infomation	\| ubiquitin protein ligase 5 \| Chr4:7445585-7448819 FORWARD LENGTH=2622 \| 201606
Sequence	ATGACTCTAAGCCGTTCATCAGCCGACGATTCAACCAATAACGCTAACCGATCTTACTCC GCCGTGGCTGGAACCGATAACAAACGAAAACGAGACGAGGACTCTTCTGATTACGTCGGC GTTGCTGAAAGTCTCGAGATGTTGAAGAAACAAGAAATCGACGCCGATCATATGGCTGCG TCGGCTCAACAGACTTTAATTTCATGGAGATCCGGTGAGAATTCCCGGTCTCTATCTTCT TCCGGTGAGTGTTCTTCGTCGAATCGTCCTGAGTCGACTCGGTTACAAATCTTTGTGAGG ATGATGTCTGGAGGTAAAACGATTGTGATCCACGCTGAGAAATACGATACTGTTGAGAAA CTTCATCAGAGAATCGAGTGGAAAACGAAGATTCCGGCGCTTGAGCAACGAGTTATCTAC AAAGGTAAGCAGCTACAGCGTGAAAACTCGCTTACTTACTACTCCATCGAGCAAGACGCT TCGCTTCAGCTCGTTGCTCGTATGCAGAGCACAGAGCATCCTGTAGCTTGGCAAACGATT GATGATATTATGTATACAATTTCGAGAATGTATAAAGGTGAGAATCTTCAATCTAACATC AACGAGAAGATTGTTACTTTCTTTGCGATGATTCCTGTGGAGAGTGACGAATCGATTGCG AAATATCTCAACATTTTCTCGAACTCTTCGGTTCCAGCTGCTTTAGTGATGCTATATGCT TCTTCTTTAGAGAGGAATAAGTCTTGTGCTAAGAGCTCTGTTAAGCTGTTCTTGAGTAAT TGTGTAGCTTTACCGAAGAATCAGAAGAACTATTGTTTACCAATAGTGTTAGAGTTTTGT AAACTGCTTAGGAAAGTTTGCCCTGATCAGAAGCTATATGTTACTTGCCGGAACACCTTG GGATCGATGCTGGAAACGTTTGATAACCCTCATGGTGTATATAATGATCAATATGAGACT TTTGGGGTGGAGATTTTCCCGTTCTTTACTGAGTTAACTGGTCTTTTGTTGAATGAGTTA GCTCAGAATTCAGGGCCTAGTTTCTGTGACTTTCAGAAAGTTTCTTCCTTTTGGCAACAA TTGAGGAAAGTCATTGAACTCAAAGTTGCCTTTCCCATTCCCATTGTGTTACCTATGCAA AGTACTGCATTGGAGGCGGAGATCAGACATCTTCATCGGTTATTTGGAAGCTTGTTGACG ACTATGGACCTTTGTATGTGTAGGGTCGAGTCTTCGTTGGCTGATAAAGAAGTTGGAAAC AGTGAAACTATGTCTTCATCGTGGTCTCAGTATCTTTCCATTCTGAAGATTATCAATTCA ATGTCTAACATTTATCAAGGTGCTAAGGGACAGCTAGCTGTTATGTTAAATAAAAACAAG GTTTCATTCTCCGCCCTCGTTGTGAAATTTGCTAAAAGAGGAGATGACCACCAATGGATC TTTGAGTATAAGGAAGCTACCAACTTTGAAGCTAGGAGGCATTTGGCAATGCTCTTGTTT CCTGACGTGAAAGAAGACTTTGAGGAGATGCACGAAATGCTCATTGATCGGTCCAATTTG CTATCAGAATCATTTGAGTACATAGTGGGCGCAAGCCCTGAAGCACTTCATGGTGGACTG TTCATGGAATTCAAGAATGAGGAAGCTACAGGTCCTGGTGTTCTACGAGAATGGTTCTAT CTGGTATGTCAGGAGATATTCAATCCAAAAAATACCCTCTTCCTTCGATCTGCTGATGAT TTTAGAAGATTCTCTCCAAACCCAGCATCCAAGGTGGATCCATTGCATCCTGACTTCTTC GAGTTCACGGGTCGTGTGATTGCCTTAGCTTTGATGCACAAAGTTCAAGTGGGTGTGCTG TTCGATCGTGTTTTCTTCTTACAATTGGCCGGACTGAAAATATCTTTGGAAGATATTAAG GACACCGATCGAATTATGTACAATAGCTGCAAACAGATTCTGGAAATGGATCCAGAGTTT TTCGATTCAAACGCAGGCCTTGGTCTAACATTCGTGTTGGAAACCGAGGAGCTGGGAAAG AGGGATACGATAGAGCTATGTCCAGACGGGAAACTCAAGGCTGTTAACAGCAAGAACAGG AAACAATACGTCGATCTCCTCATCGAACGCCGATTTGCCACACCAATCTTGGAGCAAGTA AAACAATTTTCTCGAGGTTTCACTGATATGCTATCACATTCTGTACCGCCCAGATCATTT TTCAAGAGATTATACCTAGAGGATCTGGATGGAATGCTTCGAGGAGGAGAAAACCCGATA AGCATAGATGATTGGAAAGCGCATACAGAATACAACGGATTCAAAGAGACTGATCGCCAA ATAGACTGGTTCTGGAAGATTCTGAAGAAAATGACAGAGGAAGAACAGAGGAGTATACTG TTCTTTTGGACATCGAATAAGTTTGTACCAGTGGAAGGGTTTAGAGGATTATCATCAAAG CTTTATATCTACAGATTATATGAAGCTAATGATCGTCTTCCATTGTCTCATACTTGCTTT TACCGTCTCTGTATACCGAGATACCCGACGATTACTCTCATGGAACAACGCCTCCGACTC ATCGCTCAAGATCATGTCAGCTCCAGTTTCGGTAAATGGTGA

Peptide Sequence

PEP ID	AT4G12570.1
PEP Infomation	\| ubiquitin protein ligase 5 \| Chr4:7445585-7448819 FORWARD LENGTH=873 \| 201606
Sequence	MTLSRSSADDSTNNANRSYSAVAGTDNKRKRDEDSSDYVGVAESLEMLKKQEIDADHMAA SAQQTLISWRSGENSRSLSSSGECSSSNRPESTRLQIFVRMMSGGKTIVIHAEKYDTVEK LHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIEQDASLQLVARMQSTEHPVAWQTI DDIMYTISRMYKGENLQSNINEKIVTFFAMIPVESDESIAKYLNIFSNSSVPAALVMLYA SSLERNKSCAKSSVKLFLSNCVALPKNQKNYCLPIVLEFCKLLRKVCPDQKLYVTCRNTL GSMLETFDNPHGVYNDQYETFGVEIFPFFTELTGLLLNELAQNSGPSFCDFQKVSSFWQQ LRKVIELKVAFPIPIVLPMQSTALEAEIRHLHRLFGSLLTTMDLCMCRVESSLADKEVGN SETMSSSWSQYLSILKIINSMSNIYQGAKGQLAVMLNKNKVSFSALVVKFAKRGDDHQWI FEYKEATNFEARRHLAMLLFPDVKEDFEEMHEMLIDRSNLLSESFEYIVGASPEALHGGL FMEFKNEEATGPGVLREWFYLVCQEIFNPKNTLFLRSADDFRRFSPNPASKVDPLHPDFF EFTGRVIALALMHKVQVGVLFDRVFFLQLAGLKISLEDIKDTDRIMYNSCKQILEMDPEF FDSNAGLGLTFVLETEELGKRDTIELCPDGKLKAVNSKNRKQYVDLLIERRFATPILEQV KQFSRGFTDMLSHSVPPRSFFKRLYLEDLDGMLRGGENPISIDDWKAHTEYNGFKETDRQ IDWFWKILKKMTEEEQRSILFFWTSNKFVPVEGFRGLSSKLYIYRLYEANDRLPLSHTCF YRLCIPRYPTITLMEQRLRLIAQDHVSSSFGKW

Transcript Sequence

Transcript ID	AT4G12570.1
Transcript Infomation	\| ubiquitin protein ligase 5 \| Chr4:7445278-7449205 FORWARD LENGTH=3315 \| 201606
Sequence	TCAGAGATATTTTTACACTAATTTTATAGAAATTCATTAATCTAATCACAAATTAATAAA ATAAAGAGGTGTGAAACGTTTAACAATGGCATAGAGAGCGAGAGAGAGAGAGAGGAAAAC TGTGTTAAACCCAGACGAAACCTTCGATCTTCTTCTCCTCTCTCAATCTCTTCACCTTCC TTCCTCCTTCTTCCTCACCTCTATACTCCGTTACGGTTAATTTTCCGGCCATCGAATGTT GGATAAGGTTTTCGCGAAAGCCGATAGAGAAAGATAGAGACAGAGAGAGAGAGATTCTCG TCGCTAAATGACTCTAAGCCGTTCATCAGCCGACGATTCAACCAATAACGCTAACCGATC TTACTCCGCCGTGGCTGGAACCGATAACAAACGAAAACGAGACGAGGACTCTTCTGATTA CGTCGGCGTTGCTGAAAGTCTCGAGATGTTGAAGAAACAAGAAATCGACGCCGATCATAT GGCTGCGTCGGCTCAACAGACTTTAATTTCATGGAGATCCGGTGAGAATTCCCGGTCTCT ATCTTCTTCCGGTGAGTGTTCTTCGTCGAATCGTCCTGAGTCGACTCGGTTACAAATCTT TGTGAGGATGATGTCTGGAGGTAAAACGATTGTGATCCACGCTGAGAAATACGATACTGT TGAGAAACTTCATCAGAGAATCGAGTGGAAAACGAAGATTCCGGCGCTTGAGCAACGAGT TATCTACAAAGGTAAGCAGCTACAGCGTGAAAACTCGCTTACTTACTACTCCATCGAGCA AGACGCTTCGCTTCAGCTCGTTGCTCGTATGCAGAGCACAGAGCATCCTGTAGCTTGGCA AACGATTGATGATATTATGTATACAATTTCGAGAATGTATAAAGGTGAGAATCTTCAATC TAACATCAACGAGAAGATTGTTACTTTCTTTGCGATGATTCCTGTGGAGAGTGACGAATC GATTGCGAAATATCTCAACATTTTCTCGAACTCTTCGGTTCCAGCTGCTTTAGTGATGCT ATATGCTTCTTCTTTAGAGAGGAATAAGTCTTGTGCTAAGAGCTCTGTTAAGCTGTTCTT GAGTAATTGTGTAGCTTTACCGAAGAATCAGAAGAACTATTGTTTACCAATAGTGTTAGA GTTTTGTAAACTGCTTAGGAAAGTTTGCCCTGATCAGAAGCTATATGTTACTTGCCGGAA CACCTTGGGATCGATGCTGGAAACGTTTGATAACCCTCATGGTGTATATAATGATCAATA TGAGACTTTTGGGGTGGAGATTTTCCCGTTCTTTACTGAGTTAACTGGTCTTTTGTTGAA TGAGTTAGCTCAGAATTCAGGGCCTAGTTTCTGTGACTTTCAGAAAGTTTCTTCCTTTTG GCAACAATTGAGGAAAGTCATTGAACTCAAAGTTGCCTTTCCCATTCCCATTGTGTTACC TATGCAAAGTACTGCATTGGAGGCGGAGATCAGACATCTTCATCGGTTATTTGGAAGCTT GTTGACGACTATGGACCTTTGTATGTGTAGGGTCGAGTCTTCGTTGGCTGATAAAGAAGT TGGAAACAGTGAAACTATGTCTTCATCGTGGTCTCAGTATCTTTCCATTCTGAAGATTAT CAATTCAATGTCTAACATTTATCAAGGTGCTAAGGGACAGCTAGCTGTTATGTTAAATAA AAACAAGGTTTCATTCTCCGCCCTCGTTGTGAAATTTGCTAAAAGAGGAGATGACCACCA ATGGATCTTTGAGTATAAGGAAGCTACCAACTTTGAAGCTAGGAGGCATTTGGCAATGCT CTTGTTTCCTGACGTGAAAGAAGACTTTGAGGAGATGCACGAAATGCTCATTGATCGGTC CAATTTGCTATCAGAATCATTTGAGTACATAGTGGGCGCAAGCCCTGAAGCACTTCATGG TGGACTGTTCATGGAATTCAAGAATGAGGAAGCTACAGGTCCTGGTGTTCTACGAGAATG GTTCTATCTGGTATGTCAGGAGATATTCAATCCAAAAAATACCCTCTTCCTTCGATCTGC TGATGATTTTAGAAGATTCTCTCCAAACCCAGCATCCAAGGTGGATCCATTGCATCCTGA CTTCTTCGAGTTCACGGGTCGTGTGATTGCCTTAGCTTTGATGCACAAAGTTCAAGTGGG TGTGCTGTTCGATCGTGTTTTCTTCTTACAATTGGCCGGACTGAAAATATCTTTGGAAGA TATTAAGGACACCGATCGAATTATGTACAATAGCTGCAAACAGATTCTGGAAATGGATCC AGAGTTTTTCGATTCAAACGCAGGCCTTGGTCTAACATTCGTGTTGGAAACCGAGGAGCT GGGAAAGAGGGATACGATAGAGCTATGTCCAGACGGGAAACTCAAGGCTGTTAACAGCAA GAACAGGAAACAATACGTCGATCTCCTCATCGAACGCCGATTTGCCACACCAATCTTGGA GCAAGTAAAACAATTTTCTCGAGGTTTCACTGATATGCTATCACATTCTGTACCGCCCAG ATCATTTTTCAAGAGATTATACCTAGAGGATCTGGATGGAATGCTTCGAGGAGGAGAAAA CCCGATAAGCATAGATGATTGGAAAGCGCATACAGAATACAACGGATTCAAAGAGACTGA TCGCCAAATAGACTGGTTCTGGAAGATTCTGAAGAAAATGACAGAGGAAGAACAGAGGAG TATACTGTTCTTTTGGACATCGAATAAGTTTGTACCAGTGGAAGGGTTTAGAGGATTATC ATCAAAGCTTTATATCTACAGATTATATGAAGCTAATGATCGTCTTCCATTGTCTCATAC TTGCTTTTACCGTCTCTGTATACCGAGATACCCGACGATTACTCTCATGGAACAACGCCT CCGACTCATCGCTCAAGATCATGTCAGCTCCAGTTTCGGTAAATGGTGAAATAATTATCA AAGTAATTTCTATCTTCTCTCTCTCTCTCTCTCTCAATCTATCCGTCTCTCAGTCTGATC TTTAGGGTTCGTAGATTGGTGCTTTTGGTGTATAGATTTAGTGTTATGGTCATGCCTCTG TTTATGACCGGAAGATTTCTTAACTTCTGTTTTTAACTTATGGATAAATTAAGTCCCATC AATTAATTATAAACTTATGCCGATGAGCACAAGGTATGTTAAAATCGTTTTTCACTTTTT TGTGTTTGGATTTATCGAATCATGTAAATACTAAACATTAGAGTAATTTCACTTCGATTT GCAAATAGCAAAATAGGAGTCTTTGTTTTGTAGTATGCTTCTTTTGTGTTTATGTTAATA ATTTGTGTTAAGAGA