Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G11080.1
CDS Infomation	\| HMG (high mobility group) box protein \| Chr4:6760898-6763272 REVERSE LENGTH=1341 \| 201606
Sequence	ATGTCGACAGTTTCTTCAGATCCTGCTCATGCGAAGAAATCGAGAAACAGTAGAAAAGCG TTAAAGCAAAAGAATGAGATCGTCGAGTCATCACCGGTCTCAGACAAGGGGAAAGAAACG AAGTCGTTTGAGAAAGATCTGATGGAGATGCAAGCGATGTTGGAGAAGATGAAGATCGAG AAGGAGAAAACTGAGGATTTGTTGAAGGAGAAGGACGAGATCTTGAGGAAGAAGGAAGTT GAACAGGAAAAACTTAAGACGGAGCTGAAGAAACTGCAGAAGATGAAGGAATTCAAGCCT AACATGACTTTTGCTTTTAGTCAATCTTTGGCACAAACTGAAGAAGAAAAGAAGGGAAAG AAGAAGAAGAAGGATTGTGCTGAAACAAAGAGACCATCAACACCATATATTTTGTGGTGT AAGGATAATTGGAACGAAGTGAAGAAACAGAATCCTGAAGCTGATTTCAAGGAGACTTCG AACATTCTGGGTGCTAAGTGGAAGGGGATTAGTGCTGAAGAGAAGAAGCCTTATGAGGAG AAGTATCAGGCGGATAAGGAAGCTTATCTTCAGGTTATTACAAAGGAGAAGCGTGAGAGG GAAGCAATGAAGCTTCTTGATGATGAGCAGAAGCAGAAAACTGCAATGGAATTGCTTGAT CAGTATCTTCACTTTGTTCAGGAAGCTGAACATGACAACAAGAAAAAGGCCAAGAAGATA AAGGATCCCCTGAAGCCTAAACAACCAATATCTGCTTACCTGATCTATGCAAACGAGAGG AGAGCTGCTTTAAAAGGAGAAAACAAAAGCGTTATTGAGGTCGCTAAGATGGCTGGAGAA GAGTGGAAGAACTTGTCGGAAGAAAAAAAGGCTCCTTATGATCAGATGGCGAAAAAGAAC AAGGAGATATATCTGCAAGAAATGGAAGGATATAAAAGAACAAAGGAAGAAGAAGCAATG AGCCAGAAGAAAGAAGAAGAAGAATTCATGAAACTCCATAAACAAGAAGCTCTCCAACTT CTCAAGAAGAAGGAGAAAACCGACAATATCATAAAGAAGACGAAAGAGACGGCGAAGAAC AAGAAAAAGAACGAGAATGTTGATCCTAACAAACCCAAAAAGCCTACTTCTTCATACTTT CTCTTCTGCAAAGACGCAAGAAAGAGTGTGTTAGAAGAACATCCTGGGATCAACAACTCA ACTGTTACTGCTCACATTTCATTGAAATGGATGGAACTTGGTGAAGAGGAGAAACAAGTT TACAATAGCAAAGCTGCTGAGTTAATGGAAGCTTACAAGAAAGAAGTGGAAGAGTACAAT AAGACCAAGACTTCGTCGTAG

Peptide Sequence

PEP ID	AT4G11080.1
PEP Infomation	\| HMG (high mobility group) box protein \| Chr4:6760898-6763272 REVERSE LENGTH=446 \| 201606
Sequence	MSTVSSDPAHAKKSRNSRKALKQKNEIVESSPVSDKGKETKSFEKDLMEMQAMLEKMKIE KEKTEDLLKEKDEILRKKEVEQEKLKTELKKLQKMKEFKPNMTFAFSQSLAQTEEEKKGK KKKKDCAETKRPSTPYILWCKDNWNEVKKQNPEADFKETSNILGAKWKGISAEEKKPYEE KYQADKEAYLQVITKEKREREAMKLLDDEQKQKTAMELLDQYLHFVQEAEHDNKKKAKKI KDPLKPKQPISAYLIYANERRAALKGENKSVIEVAKMAGEEWKNLSEEKKAPYDQMAKKN KEIYLQEMEGYKRTKEEEAMSQKKEEEEFMKLHKQEALQLLKKKEKTDNIIKKTKETAKN KKKNENVDPNKPKKPTSSYFLFCKDARKSVLEEHPGINNSTVTAHISLKWMELGEEEKQV YNSKAAELMEAYKKEVEEYNKTKTSS

Transcript Sequence

Transcript ID	AT4G11080.1
Transcript Infomation	\| HMG (high mobility group) box protein \| Chr4:6760278-6763499 REVERSE LENGTH=2188 \| 201606
Sequence	CAAAAAAGCGGCAAGGCGTTAAGATTTTAGAGAGAAAGTTGATAACTGCTTATCTTCTTC GGACGCCAAAATTTTCTTTAAATCCAGAAATGGAACAGTTTTGAATTTCAAAATGTTGAC CGTTAAGCCTTTGTTTATTTAATAAACCCAGAGGCTCCACTAATCGTCAAAATCCCAAAT TCCAAAATCTCCATTTCTCTCTCGCTCTCGCTCAATCTCTCTTCACAATGTCGACAGTTT CTTCAGATCCTGCTCATGCGAAGAAATCGAGAAACAGTAGAAAAGCGTTAAAGCAAAAGA ATGAGATCGTCGAGTCATCACCGGTCTCAGACAAGGGGAAAGAAACGAAGTCGTTTGAGA AAGATCTGATGGAGATGCAAGCGATGTTGGAGAAGATGAAGATCGAGAAGGAGAAAACTG AGGATTTGTTGAAGGAGAAGGACGAGATCTTGAGGAAGAAGGAAGTTGAACAGGAAAAAC TTAAGACGGAGCTGAAGAAACTGCAGAAGATGAAGGAATTCAAGCCTAACATGACTTTTG CTTTTAGTCAATCTTTGGCACAAACTGAAGAAGAAAAGAAGGGAAAGAAGAAGAAGAAGG ATTGTGCTGAAACAAAGAGACCATCAACACCATATATTTTGTGGTGTAAGGATAATTGGA ACGAAGTGAAGAAACAGAATCCTGAAGCTGATTTCAAGGAGACTTCGAACATTCTGGGTG CTAAGTGGAAGGGGATTAGTGCTGAAGAGAAGAAGCCTTATGAGGAGAAGTATCAGGCGG ATAAGGAAGCTTATCTTCAGGTTATTACAAAGGAGAAGCGTGAGAGGGAAGCAATGAAGC TTCTTGATGATGAGCAGAAGCAGAAAACTGCAATGGAATTGCTTGATCAGTATCTTCACT TTGTTCAGGAAGCTGAACATGACAACAAGAAAAAGGCCAAGAAGATAAAGGATCCCCTGA AGCCTAAACAACCAATATCTGCTTACCTGATCTATGCAAACGAGAGGAGAGCTGCTTTAA AAGGAGAAAACAAAAGCGTTATTGAGGTCGCTAAGATGGCTGGAGAAGAGTGGAAGAACT TGTCGGAAGAAAAAAAGGCTCCTTATGATCAGATGGCGAAAAAGAACAAGGAGATATATC TGCAAGAAATGGAAGGATATAAAAGAACAAAGGAAGAAGAAGCAATGAGCCAGAAGAAAG AAGAAGAAGAATTCATGAAACTCCATAAACAAGAAGCTCTCCAACTTCTCAAGAAGAAGG AGAAAACCGACAATATCATAAAGAAGACGAAAGAGACGGCGAAGAACAAGAAAAAGAACG AGAATGTTGATCCTAACAAACCCAAAAAGCCTACTTCTTCATACTTTCTCTTCTGCAAAG ACGCAAGAAAGAGTGTGTTAGAAGAACATCCTGGGATCAACAACTCAACTGTTACTGCTC ACATTTCATTGAAATGGATGGAACTTGGTGAAGAGGAGAAACAAGTTTACAATAGCAAAG CTGCTGAGTTAATGGAAGCTTACAAGAAAGAAGTGGAAGAGTACAATAAGACCAAGACTT CGTCGTAGAGAAAGAAAAATTAGAGAATGTTCAAGTTTGCTCATATTGAACATCTCTACT TATGCAAAATGACTCTGCTACTTAAATCGCTAGGCGCTAATCGGGATTATATTAATCTCA AGAATATTCAATACTGTACTACTTAAATCGAATTGTGGAAAAAAGTGGGGAAGCCTGTGT TAATCTCAGCCGTTGGATCAAATTGAAAATTAACGTCGAAGATTGGAGAACTTCCTGTGG AAGTATTTGTTGAGATCAATCCAGTGAAATCCGACGGACCAGAACTTCCCACGTGGTGGT AAAACGTTCCACCACCGTTGATGGACTCGTAAGTGTATAACGGCGACGTGACGGGGAATG AGAAAGCTTCGCTTCCAAGTCCGCCGGTACGTACGGTAAGACTGGCCCTGAGATTCTGGT AATTTACTGCTACTGTGTGTTTTGGTTTGGTTTCTCGTTTCTCTGGAAGTGGGATCCCCT GTGAACAAGTGTGTGTTCCTCTGTATGTTACTTCGAAGATCGTTGGATCACCGTCCGATC TTTGGACTTGTTTCGTAGCCCAACAGTACTGTGTGTTACGAAATGTGCATCTGTAATAAC TCCTGCAATAAAAACACAAATTAGTCCT