Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT4G08920.1
CDS Infomation	\| cryptochrome 1 \| Chr4:5724260-5726905 FORWARD LENGTH=2046 \| 201606
Sequence	ATGTCTGGTTCTGTATCTGGTTGTGGTTCTGGTGGTTGTAGTATTGTATGGTTTAGAAGA GATCTTAGGGTTGAAGATAATCCAGCTTTAGCAGCAGCAGTAAGAGCTGGTCCAGTGATT GCTCTGTTTGTTTGGGCACCAGAAGAAGAAGGACACTATCATCCAGGTAGGGTTTCTAGG TGGTGGCTCAAGAACAGTTTGGCTCAGCTTGATTCTTCTCTTAGAAGTCTTGGTACTTGT CTTATCACCAAGAGATCTACTGATAGTGTTGCTTCTCTTCTTGATGTTGTTAAATCCACT GGTGCTTCTCAGATCTTCTTCAACCATTTGTATGATCCATTGTCTTTGGTGCGTGATCAC CGAGCTAAAGATGTTTTGACGGCGCAAGGCATAGCGGTTCGATCATTCAACGCAGACTTG CTTTATGAGCCATGGGAAGTGACTGATGAATTAGGCCGTCCTTTCTCTATGTTTGCTGCG TTTTGGGAGAGATGTCTTAGTATGCCTTATGACCCTGAGTCTCCTCTTCTTCCACCTAAG AAGATCATTTCAGGGGATGTGTCTAAATGTGTTGCGGATCCATTGGTGTTTGAGGATGAC TCTGAGAAAGGAAGCAATGCACTTCTGGCTCGTGCTTGGTCTCCTGGATGGAGTAATGGT GATAAAGCTCTCACAACGTTTATAAACGGTCCATTGCTTGAATACTCTAAGAACCGCAGA AAAGCCGATAGTGCTACAACCTCGTTTCTTTCTCCACACTTGCATTTTGGGGAAGTGAGT GTGAGAAAAGTTTTTCATCTTGTTCGGATCAAACAGGTCGCGTGGGCAAACGAAGGAAAC GAGGCCGGGGAAGAAAGCGTGAATCTTTTCCTGAAATCTATTGGTCTCAGGGAGTATTCT AGGTACATAAGTTTTAACCATCCATATTCCCATGAAAGACCACTTCTTGGCCATCTAAAG TTCTTCCCTTGGGCTGTGGATGAGAACTATTTCAAGGCATGGAGGCAAGGCCGGACTGGA TATCCGTTGGTCGATGCCGGGATGAGAGAGTTATGGGCTACTGGTTGGTTGCATGATCGC ATAAGAGTAGTTGTTTCAAGCTTCTTTGTTAAAGTGCTTCAATTACCATGGAGATGGGGG ATGAAGTATTTCTGGGACACACTTCTTGATGCGGATTTAGAAAGCGATGCTCTTGGTTGG CAATACATTACCGGTACTCTCCCGGATAGCCGGGAGTTTGATCGCATAGATAACCCTCAG TTTGAAGGGTACAAGTTTGATCCAAATGGTGAATACGTAAGGCGATGGCTTCCTGAACTC TCTAGACTCCCGACAGACTGGATACATCATCCGTGGAACGCACCTGAGTCCGTTCTTCAA GCTGCTGGTATCGAGCTTGGATCAAACTATCCTCTACCAATTGTAGGATTAGACGAAGCA AAAGCACGGCTTCATGAAGCGCTTTCACAGATGTGGCAACTAGAAGCTGCTTCAAGAGCT GCAATAGAGAACGGATCCGAAGAAGGACTTGGAGATTCTGCTGAGGTAGAGGAAGCTCCT ATAGAGTTCCCAAGGGACATTACAATGGAAGAGACTGAACCAACCAGACTCAACCCAAAC AGGAGATATGAGGATCAGATGGTTCCAAGCATTACTTCTTCTTTGATCAGACCTGAAGAA GACGAAGAGTCGTCTCTTAATTTGAGAAATTCAGTAGGAGATAGCAGAGCAGAGGTTCCA AGGAACATGGTTAACACCAACCAAGCTCAGCAGCGGAGAGCAGAACCGGCTTCAAACCAA GTCACTGCTATGATTCCAGAATTTAATATCAGAATTGTTGCAGAGAGCACTGAAGACTCA ACAGCGGAATCTTCCAGCAGCGGAAGGAGAGAAAGAAGCGGAGGCATAGTCCCCGAGTGG TCTCCAGGGTACTCAGAGCAGTTCCCTAGTGAAGAAAATGGTATTGGAGGAGGAAGTACA ACGTCTAGCTACTTGCAGAATCACCATGAAATACTGAACTGGAGACGGCTTTCACAAACC GGGTAA

Peptide Sequence

PEP ID	AT4G08920.1
PEP Infomation	\| cryptochrome 1 \| Chr4:5724260-5726905 FORWARD LENGTH=681 \| 201606
Sequence	MSGSVSGCGSGGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSR WWLKNSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDH RAKDVLTAQGIAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPK KIISGDVSKCVADPLVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRR KADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYS RYISFNHPYSHERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDR IRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQ FEGYKFDPNGEYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEA KARLHEALSQMWQLEAASRAAIENGSEEGLGDSAEVEEAPIEFPRDITMEETEPTRLNPN RRYEDQMVPSITSSLIRPEEDEESSLNLRNSVGDSRAEVPRNMVNTNQAQQRRAEPASNQ VTAMIPEFNIRIVAESTEDSTAESSSSGRRERSGGIVPEWSPGYSEQFPSEENGIGGGST TSSYLQNHHEILNWRRLSQTG

Transcript Sequence

Transcript ID	AT4G08920.1
Transcript Infomation	\| cryptochrome 1 \| Chr4:5723651-5727268 FORWARD LENGTH=3018 \| 201606
Sequence	AATAAAAGTTGTGGTGGAAAATTATTCCAATAAATCTCGTCGTGTGAATTGAATCATTAT TCCTAGTGTCAATCTTCTTCACCTCTCTCTATCAACCTCCAATTTCTTCTTCTTCTTTTT TTTTAGATAACTTATTTTTATTTTATTTTTCTTTGATTTTTCACTTTAAGACAAAAATAA TAATTTTATATTTCTACCAAAAATAAATAATAATTATAATTTAATAAGAGATAAATATTT TTTCAAACTGTAACCTAAACAATAAATAAATTAAAAGAGAAATTAATGCAAATATTGCTA TATTTTTGGGTTATTACTTAGAGACTACTTTGTCCAAAATTAGGAAAAATCTTTTTGGGT GAATAATTCCCAAAAGTATAGTTGCATTTTGCCAGAGAGGCACTCAGAGAGAGAGAGAGA TATTCGTAAAGATAAGCTTTTTTTTTTTTTTTGCCTTCTCATCAAAAATCTTTTTTTTTT TGTTGTCTTTCTTCTCGAGAGAGATAAGTGACCAAAGGGTTTCGATTTCTGGAAATAGTT TGAATAAAAAAGTAATTTTTATGTGATTATTGGCAAAGAAAAGTTTTAGTTTTTTTTAGT TTGTGAGAGATGTCTGGTTCTGTATCTGGTTGTGGTTCTGGTGGTTGTAGTATTGTATGG TTTAGAAGAGATCTTAGGGTTGAAGATAATCCAGCTTTAGCAGCAGCAGTAAGAGCTGGT CCAGTGATTGCTCTGTTTGTTTGGGCACCAGAAGAAGAAGGACACTATCATCCAGGTAGG GTTTCTAGGTGGTGGCTCAAGAACAGTTTGGCTCAGCTTGATTCTTCTCTTAGAAGTCTT GGTACTTGTCTTATCACCAAGAGATCTACTGATAGTGTTGCTTCTCTTCTTGATGTTGTT AAATCCACTGGTGCTTCTCAGATCTTCTTCAACCATTTGTATGATCCATTGTCTTTGGTG CGTGATCACCGAGCTAAAGATGTTTTGACGGCGCAAGGCATAGCGGTTCGATCATTCAAC GCAGACTTGCTTTATGAGCCATGGGAAGTGACTGATGAATTAGGCCGTCCTTTCTCTATG TTTGCTGCGTTTTGGGAGAGATGTCTTAGTATGCCTTATGACCCTGAGTCTCCTCTTCTT CCACCTAAGAAGATCATTTCAGGGGATGTGTCTAAATGTGTTGCGGATCCATTGGTGTTT GAGGATGACTCTGAGAAAGGAAGCAATGCACTTCTGGCTCGTGCTTGGTCTCCTGGATGG AGTAATGGTGATAAAGCTCTCACAACGTTTATAAACGGTCCATTGCTTGAATACTCTAAG AACCGCAGAAAAGCCGATAGTGCTACAACCTCGTTTCTTTCTCCACACTTGCATTTTGGG GAAGTGAGTGTGAGAAAAGTTTTTCATCTTGTTCGGATCAAACAGGTCGCGTGGGCAAAC GAAGGAAACGAGGCCGGGGAAGAAAGCGTGAATCTTTTCCTGAAATCTATTGGTCTCAGG GAGTATTCTAGGTACATAAGTTTTAACCATCCATATTCCCATGAAAGACCACTTCTTGGC CATCTAAAGTTCTTCCCTTGGGCTGTGGATGAGAACTATTTCAAGGCATGGAGGCAAGGC CGGACTGGATATCCGTTGGTCGATGCCGGGATGAGAGAGTTATGGGCTACTGGTTGGTTG CATGATCGCATAAGAGTAGTTGTTTCAAGCTTCTTTGTTAAAGTGCTTCAATTACCATGG AGATGGGGGATGAAGTATTTCTGGGACACACTTCTTGATGCGGATTTAGAAAGCGATGCT CTTGGTTGGCAATACATTACCGGTACTCTCCCGGATAGCCGGGAGTTTGATCGCATAGAT AACCCTCAGTTTGAAGGGTACAAGTTTGATCCAAATGGTGAATACGTAAGGCGATGGCTT CCTGAACTCTCTAGACTCCCGACAGACTGGATACATCATCCGTGGAACGCACCTGAGTCC GTTCTTCAAGCTGCTGGTATCGAGCTTGGATCAAACTATCCTCTACCAATTGTAGGATTA GACGAAGCAAAAGCACGGCTTCATGAAGCGCTTTCACAGATGTGGCAACTAGAAGCTGCT TCAAGAGCTGCAATAGAGAACGGATCCGAAGAAGGACTTGGAGATTCTGCTGAGGTAGAG GAAGCTCCTATAGAGTTCCCAAGGGACATTACAATGGAAGAGACTGAACCAACCAGACTC AACCCAAACAGGAGATATGAGGATCAGATGGTTCCAAGCATTACTTCTTCTTTGATCAGA CCTGAAGAAGACGAAGAGTCGTCTCTTAATTTGAGAAATTCAGTAGGAGATAGCAGAGCA GAGGTTCCAAGGAACATGGTTAACACCAACCAAGCTCAGCAGCGGAGAGCAGAACCGGCT TCAAACCAAGTCACTGCTATGATTCCAGAATTTAATATCAGAATTGTTGCAGAGAGCACT GAAGACTCAACAGCGGAATCTTCCAGCAGCGGAAGGAGAGAAAGAAGCGGAGGCATAGTC CCCGAGTGGTCTCCAGGGTACTCAGAGCAGTTCCCTAGTGAAGAAAATGGTATTGGAGGA GGAAGTACAACGTCTAGCTACTTGCAGAATCACCATGAAATACTGAACTGGAGACGGCTT TCACAAACCGGGTAAAAAGTGCATTTGGAGGTGCAAAAGGAGAGGAACATCATAAGGGCT GTAACTCCGGTGAAATCTGGTTGGACTGTAAACCGAGTACATTTGGTACGGTTTAATGTA ATTCCGGTTATGGGGCTGGAGAGAAACTATGTAGGAGTTTGTCTGATGTACATTTTTTAT TTATCTCTGGTTCCATCATGTTATAATACACTGTATAGTAAGTAGTCTGTTGCTTGTGGT ATTAGACCAGGTCTCATACTTGTTGGCTTTCAAAGTTTTGGTTATAAGTCAAACAGATGC CAATTCTTAATCTTATAAACATATATAGTTCACATTTATTTATGATAAATGACTTGTTAG TGTATATGAAACACGTAC