Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G62890.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:23246168-23247973 FORWARD LENGTH=1722 \| 201606
Sequence	ATGAGCAAGGGGGCGGCAATAATAGCTTATGCAAATCCCATCTTTCATATTCGACATCTA AAGCTTGAATCTTTCTTGTGGAACATCATCATTCGTGCCATTGTTCACAATGTTTCGTCG CCTCAACGACATTCTCCGATCTCAGTCTACCTCCGTATGCGCAACCATCGCGTCTCTCCC GATTTTCATACCTTTCCGTTTCTTCTCCCTTCTTTCCACAATCCGCTTCATCTTCCTCTT GGGCAACGAACTCATGCTCAGATTCTTCTTTTTGGACTTGACAAAGACCCATTTGTCCGA ACTTCACTGCTCAACATGTATTCTTCCTGTGGCGACTTGAGATCAGCTCAGCGAGTTTTC GATGACTCGGGCTCGAAGGATTTACCGGCCTGGAACTCTGTGGTCAATGCTTATGCCAAA GCTGGGTTGATCGATGATGCGCGGAAACTGTTCGACGAAATGCCTGAAAGAAACGTGATT TCCTGGAGCTGCTTGATTAACGGCTACGTTATGTGTGGGAAATACAAAGAAGCGCTTGAT TTGTTCCGGGAGATGCAATTACCTAAACCAAACGAAGCATTCGTCAGACCCAACGAGTTT ACAATGTCGACTGTACTCTCGGCTTGTGGGCGATTGGGTGCGCTCGAGCAAGGGAAATGG GTTCACGCTTACATCGATAAGTACCACGTTGAGATTGACATTGTCTTAGGCACAGCTCTC ATTGATATGTACGCCAAATGTGGGAGCCTCGAGAGGGCGAAAAGGGTTTTCAATGCCTTG GGATCCAAGAAAGATGTCAAAGCTTACAGTGCTATGATATGTTGCTTAGCAATGTACGGT CTCACAGATGAGTGCTTCCAACTGTTCTCTGAGATGACCACGAGTGACAACATAAACCCA AACTCTGTGACATTTGTGGGCATTCTCGGTGCTTGTGTACATCGAGGTCTAATAAACGAA GGAAAATCTTACTTTAAAATGATGATTGAGGAATTTGGTATCACGCCATCAATCCAGCAT TATGGTTGTATGGTTGATCTCTACGGAAGATCTGGTTTGATCAAAGAAGCAGAGAGCTTT ATAGCATCTATGCCTATGGAGCCTGATGTACTTATTTGGGGGTCTCTCTTAAGCGGATCA AGAATGCTTGGGGATATCAAGACTTGTGAAGGTGCCCTCAAGCGACTCATCGAGCTAGAT CCTATGAACAGTGGAGCATATGTGCTTCTCTCTAACGTCTATGCCAAAACAGGGAGGTGG ATGGAAGTCAAGTGTATCAGACACGAAATGGAGGTAAAGGGCATTAATAAAGTTCCGGGA TGTAGCTATGTTGAAGTAGAGGGAGTGGTTCACGAGTTTGTTGTAGGAGACGAATCTCAA CAAGAGAGCGAAAGGATCTATGCTATGCTCGATGAGATAATGCAGAGGCTGAGAGAAGCT GGATATGTTACAGACACTAAGGAGGTTTTACTTGATCTTAACGAGAAAGATAAAGAGATA GCTTTGTCTTACCACAGTGAGAAACTGGCTATTGCGTTCTGTTTGATGAAGACAAGGCCT GGAACTCCAGTGAGAATCATCAAGAACCTCAGAATCTGTGGAGATTGTCATCTTGTAATG AAGATGATCTCGAAGCTTTTTAGTAGAGAAATTGTTGTGAGAGATTGTAATAGATTTCAC CATTTTAGAGACGGGTCTTGCTCTTGCAGAGATTTTTGGTGA

Peptide Sequence

PEP ID	AT3G62890.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:23246168-23247973 FORWARD LENGTH=573 \| 201606
Sequence	MSKGAAIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSP DFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVF DDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALD LFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTAL IDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINP NSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESF IASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRW MEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREA GYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVM KMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW

Transcript Sequence

Transcript ID	AT3G62890.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:23246129-23248063 FORWARD LENGTH=1851 \| 201606
Sequence	TTTAAAATCGATTTCTGATACACTTGTTAGATTGAGACAATGAGCAAGGGGGCGGCAATA ATAGCTTATGCAAATCCCATCTTTCATATTCGACATCTAAAGCTTGAATCTTTCTTGTGG AACATCATCATTCGTGCCATTGTTCACAATGTTTCGTCGCCTCAACGACATTCTCCGATC TCAGTCTACCTCCGTATGCGCAACCATCGCGTCTCTCCCGATTTTCATACCTTTCCGTTT CTTCTCCCTTCTTTCCACAATCCGCTTCATCTTCCTCTTGGGCAACGAACTCATGCTCAG ATTCTTCTTTTTGGACTTGACAAAGACCCATTTGTCCGAACTTCACTGCTCAACATGTAT TCTTCCTGTGGCGACTTGAGATCAGCTCAGCGAGTTTTCGATGACTCGGGCTCGAAGGAT TTACCGGCCTGGAACTCTGTGGTCAATGCTTATGCCAAAGCTGGGTTGATCGATGATGCG CGGAAACTGTTCGACGAAATGCCTGAAAGAAACGTGATTTCCTGGAGCTGCTTGATTAAC GGCTACGTTATGTGTGGGAAATACAAAGAAGCGCTTGATTTGTTCCGGGAGATGCAATTA CCTAAACCAAACGAAGCATTCGTCAGACCCAACGAGTTTACAATGTCGACTGTACTCTCG GCTTGTGGGCGATTGGGTGCGCTCGAGCAAGGGAAATGGGTTCACGCTTACATCGATAAG TACCACGTTGAGATTGACATTGTCTTAGGCACAGCTCTCATTGATATGTACGCCAAATGT GGGAGCCTCGAGAGGGCGAAAAGGGTTTTCAATGCCTTGGGATCCAAGAAAGATGTCAAA GCTTACAGTGCTATGATATGTTGCTTAGCAATGTACGGTCTCACAGATGAGTGCTTCCAA CTGTTCTCTGAGATGACCACGAGTGACAACATAAACCCAAACTCTGTGACATTTGTGGGC ATTCTCGGTGCTTGTGTACATCGAGGTCTAATAAACGAAGGAAAATCTTACTTTAAAATG ATGATTGAGGAATTTGGTATCACGCCATCAATCCAGCATTATGGTTGTATGGTTGATCTC TACGGAAGATCTGGTTTGATCAAAGAAGCAGAGAGCTTTATAGCATCTATGCCTATGGAG CCTGATGTACTTATTTGGGGGTCTCTCTTAAGCGGATCAAGAATGCTTGGGGATATCAAG ACTTGTGAAGGTGCCCTCAAGCGACTCATCGAGCTAGATCCTATGAACAGTGGAGCATAT GTGCTTCTCTCTAACGTCTATGCCAAAACAGGGAGGTGGATGGAAGTCAAGTGTATCAGA CACGAAATGGAGGTAAAGGGCATTAATAAAGTTCCGGGATGTAGCTATGTTGAAGTAGAG GGAGTGGTTCACGAGTTTGTTGTAGGAGACGAATCTCAACAAGAGAGCGAAAGGATCTAT GCTATGCTCGATGAGATAATGCAGAGGCTGAGAGAAGCTGGATATGTTACAGACACTAAG GAGGTTTTACTTGATCTTAACGAGAAAGATAAAGAGATAGCTTTGTCTTACCACAGTGAG AAACTGGCTATTGCGTTCTGTTTGATGAAGACAAGGCCTGGAACTCCAGTGAGAATCATC AAGAACCTCAGAATCTGTGGAGATTGTCATCTTGTAATGAAGATGATCTCGAAGCTTTTT AGTAGAGAAATTGTTGTGAGAGATTGTAATAGATTTCACCATTTTAGAGACGGGTCTTGC TCTTGCAGAGATTTTTGGTGATAACAATTGCAGCAATGTTTGTGTTGGATTGAATAAACA CATTACTGAATTTTGGAGGTTTTGAAATAAAAGAATAAAATAATAAAAGAA