Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G62470.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:23106600-23108399 REVERSE LENGTH=1800 \| 201606
Sequence	ATGGCTGCTGCTCCATGGCTCCATCTCTCTAGGAGAAGAAGCTCCACTCAGACTTCATTA AGAAGCTTCCTCATTTGCTCTTCTTCATTCGATTCGGATGAATTCATTTCCAGTCAAAGC CGCGTAATCGGCGGGAGAGGAGAAGAGGAAGTACGATTTTCCGGTGCTCTCTTCTCTCGT ATGATTCATTCTTCTACTTATCATCCTTACCGTCAAATTCCATTGCCACACTCCTCTGTA CAACTGCTTGATGCGAGTCTTGGGTGTAGAGGTTTCTCTAGTGGTAGTTCTAATGTTAGT GATGGATGTGATGAAGAAGTTGAATCTGAATGCGATAATGATGAAGAAACTGGGGTCAGT TGTGTTGAATCAAGTACTAATCCGGAAGAAGTAGAGAGAGTCTGCAAAGTGATTGATGAA TTGTTTGCGTTAGATAGAAATATGGAAGCTGTTCTTGATGAAATGAAACTAGATTTATCA CATGATCTCATCGTTGAGGTTTTAGAACGTTTTCGACATGCTAGGAAGCCTGCATTTAGG TTCTTCTGTTGGGCTGCAGAGAGACAAGGATTTGCTCATGACTCAAGAACATATAACTCC ATGATGAGTATTTTAGCAAAGACTAGACAGTTCGAGACGATGGTTTCGGTTCTCGAAGAG ATGGGTACGAAAGGTCTATTGACGATGGAGACATTCACTATCGCGATGAAAGCTTTCGCT GCTGCGAAAGAGAGGAAGAAAGCTGTTGGTATCTTTGAGTTGATGAAGAAGTACAAGTTT AAGATTGGTGTTGAAACCATTAATTGCTTGCTTGATAGTCTTGGCAGGGCTAAGCTTGGA AAAGAAGCTCAGGTTCTGTTTGATAAGCTGAAGGAGAGGTTTACACCTAATATGATGACT TACACTGTTCTACTCAATGGTTGGTGCAGGGTGAGGAACTTGATAGAAGCAGCTAGAATC TGGAATGATATGATTGATCAGGGATTGAAACCTGACATTGTAGCTCACAACGTAATGCTT GAAGGGTTGTTGAGGAGTAGGAAAAAATCAGATGCGATCAAATTGTTCCATGTTATGAAA TCCAAGGGACCTTGCCCTAATGTCCGTAGCTATACCATCATGATCCGTGACTTCTGCAAA CAGTCGAGCATGGAAACTGCCATTGAATACTTTGATGACATGGTTGATTCCGGGTTGCAA CCTGATGCAGCGGTTTACACGTGTCTGATCACGGGGTTTGGGACTCAGAAGAAGCTGGAT ACTGTTTACGAACTGCTCAAGGAGATGCAAGAAAAGGGACATCCTCCGGATGGCAAAACG TATAATGCGTTGATCAAACTGATGGCGAACCAGAAAATGCCGGAACATGCCACAAGGATC TACAACAAGATGATCCAGAACGAAATTGAGCCATCGATACACACATTCAACATGATAATG AAATCATACTTCATGGCGAGAAACTATGAGATGGGGAGAGCAGTTTGGGAAGAGATGATC AAGAAAGGGATTTGTCCTGACGATAACTCCTACACGGTTTTGATCAGAGGGCTTATAGGT GAAGGCAAGTCGAGAGAGGCATGCAGATACTTAGAGGAGATGCTTGACAAAGGAATGAAA ACCCCTTTGATTGATTATAACAAGTTTGCAGCTGATTTCCACAGAGGGGGGCAACCGGAG ATATTTGAGGAATTGGCACAGAGAGCTAAGTTCTCAGGTAAGTTTGCTGCAGCAGAGATC TTTGCGAGATGGGCTCAGATGACTAGAAGGAGATTCAAACAGAGGTTCATGGAAGATTGA

Peptide Sequence

PEP ID	AT3G62470.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:23106600-23108399 REVERSE LENGTH=599 \| 201606
Sequence	MAAAPWLHLSRRRSSTQTSLRSFLICSSSFDSDEFISSQSRVIGGRGEEEVRFSGALFSR MIHSSTYHPYRQIPLPHSSVQLLDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVS CVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFR FFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFA AAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMT YTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMK SKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLD TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIM KSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMK TPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRFKQRFMED

Transcript Sequence

Transcript ID	AT3G62470.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:23106437-23108694 REVERSE LENGTH=2258 \| 201606
Sequence	GTCCCCTAAAAAAAACTTGAGAAAATATCACGACCCTAAAACGAAGATAAGATGCATACA GATAACTTCCAACTAAAAAAAGAAATTGACACCTTTGATGATTATGCGTTTGCGCTTTAA TGCTCCTGGTGGACCCAATGGTTATATGTAACCAGATCAATGGGCCTTTAATGGGTCAAA ATTATTATCACTCAAAGCTTCTAATCAAACAAAGGCCCAAATACGTGAAGAGCTCTCCGC CGTAAATCAGTGGCTTTTCACCGACTTCGCCATTGCTAACCGCCGTCGAGCTTCCATGGC TGCTGCTCCATGGCTCCATCTCTCTAGGAGAAGAAGCTCCACTCAGACTTCATTAAGAAG CTTCCTCATTTGCTCTTCTTCATTCGATTCGGATGAATTCATTTCCAGTCAAAGCCGCGT AATCGGCGGGAGAGGAGAAGAGGAAGTACGATTTTCCGGTGCTCTCTTCTCTCGTATGAT TCATTCTTCTACTTATCATCCTTACCGTCAAATTCCATTGCCACACTCCTCTGTACAACT GCTTGATGCGAGTCTTGGGTGTAGAGGTTTCTCTAGTGGTAGTTCTAATGTTAGTGATGG ATGTGATGAAGAAGTTGAATCTGAATGCGATAATGATGAAGAAACTGGGGTCAGTTGTGT TGAATCAAGTACTAATCCGGAAGAAGTAGAGAGAGTCTGCAAAGTGATTGATGAATTGTT TGCGTTAGATAGAAATATGGAAGCTGTTCTTGATGAAATGAAACTAGATTTATCACATGA TCTCATCGTTGAGGTTTTAGAACGTTTTCGACATGCTAGGAAGCCTGCATTTAGGTTCTT CTGTTGGGCTGCAGAGAGACAAGGATTTGCTCATGACTCAAGAACATATAACTCCATGAT GAGTATTTTAGCAAAGACTAGACAGTTCGAGACGATGGTTTCGGTTCTCGAAGAGATGGG TACGAAAGGTCTATTGACGATGGAGACATTCACTATCGCGATGAAAGCTTTCGCTGCTGC GAAAGAGAGGAAGAAAGCTGTTGGTATCTTTGAGTTGATGAAGAAGTACAAGTTTAAGAT TGGTGTTGAAACCATTAATTGCTTGCTTGATAGTCTTGGCAGGGCTAAGCTTGGAAAAGA AGCTCAGGTTCTGTTTGATAAGCTGAAGGAGAGGTTTACACCTAATATGATGACTTACAC TGTTCTACTCAATGGTTGGTGCAGGGTGAGGAACTTGATAGAAGCAGCTAGAATCTGGAA TGATATGATTGATCAGGGATTGAAACCTGACATTGTAGCTCACAACGTAATGCTTGAAGG GTTGTTGAGGAGTAGGAAAAAATCAGATGCGATCAAATTGTTCCATGTTATGAAATCCAA GGGACCTTGCCCTAATGTCCGTAGCTATACCATCATGATCCGTGACTTCTGCAAACAGTC GAGCATGGAAACTGCCATTGAATACTTTGATGACATGGTTGATTCCGGGTTGCAACCTGA TGCAGCGGTTTACACGTGTCTGATCACGGGGTTTGGGACTCAGAAGAAGCTGGATACTGT TTACGAACTGCTCAAGGAGATGCAAGAAAAGGGACATCCTCCGGATGGCAAAACGTATAA TGCGTTGATCAAACTGATGGCGAACCAGAAAATGCCGGAACATGCCACAAGGATCTACAA CAAGATGATCCAGAACGAAATTGAGCCATCGATACACACATTCAACATGATAATGAAATC ATACTTCATGGCGAGAAACTATGAGATGGGGAGAGCAGTTTGGGAAGAGATGATCAAGAA AGGGATTTGTCCTGACGATAACTCCTACACGGTTTTGATCAGAGGGCTTATAGGTGAAGG CAAGTCGAGAGAGGCATGCAGATACTTAGAGGAGATGCTTGACAAAGGAATGAAAACCCC TTTGATTGATTATAACAAGTTTGCAGCTGATTTCCACAGAGGGGGGCAACCGGAGATATT TGAGGAATTGGCACAGAGAGCTAAGTTCTCAGGTAAGTTTGCTGCAGCAGAGATCTTTGC GAGATGGGCTCAGATGACTAGAAGGAGATTCAAACAGAGGTTCATGGAAGATTGATGACT TGGGGGCGGGTAACTGGATCGTTCAACTCACTCACTCGGAGAAAGCTTATCTGCGAACAT GACTTCACTAGCACAGCTTGGACTGAACTGATCGTTCAACTCACTCACTCGGAGAAAGCT TTTTTGTAATTTGCTTCTATAACAAGAAAATATTAATT