Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G61520.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:22768974-22771274 REVERSE LENGTH=2301 \| 201606
Sequence	ATGAGTATCATGCTATCAATTTCCCGGCGCCGGAACTCTTATATTCTGCTCAACCATTCT CGATTCCTCCGTCGTTTTTCATATGATGTTGACCCACGGCCGGAAATCAAATTGGAGAGC CAGGAATTTGTAGTAGTCAAATTTGTGAAAACTCTTCAAAAAACCCCGCAACATGATTGG GCGTCGAGCGAGTCGCTAAGTGCGCTTGTCGTATCTTCTTCTTCTGCTTCTCCTTTAGTA TTCTCGCAAATCACGCGGCGGCTAGGATCGTATTCTCTAGCAATCTCGTTCTTCGAGTAC CTGGATGCGAAGTCTCAGTCTCTGAAACGCCGTGAAGAATCTCTCTCCTTGGCGCTTCAG TCGGTCATTGAATTCGCCGGTAGTGAACCGGACCCGCGTGATAAACTTCTCCGTCTCTAC GAGATCGCCAAAGAGAAGAACATTCCTCTTACTGTCGTTGCCACTAATCTTCTGATCCGA TGGTTTGGGCGTATGGGTATGGTGAATCAGTCGGTTCTTGTATACGAAAGACTCGATTCG AATATGAAAAACTCGCAGGTTCGTAATGTTGTGGTAGACGTCTTGCTAAGAAATGGACTT GTGGATGATGCCTTCAAGGTGCTCGACGAAATGCTTCAGAAAGAATCTGTTTTTCCTCCT AATAGAATCACAGCGGATATTGTGTTACACGAGGTTTGGAAGGGAAGGCTTTTGACAGAA GAAAAGATAATTGCTTTGATTTCAAGATTTAGCTCTCATGGTGTCTCCCCAAACTCTGTT TGGTTGACTCGGTTTATATCAAGTCTATGCAAAAATGCTCGCGCCAATGCTGCTTGGGAT ATTTTGAGCGACCTGATGAAGAACAAAACCCCACTTGAAGCTCCTCCCTTCAATGCGCTT TTGTCTTGCTTAGGAAGGAATATGGACATTAGTAGAATGAATGATTTAGTCTTGAAGATG GATGAGGTGAAAATCCGGCCTGATGTTGTGACTTTAGGGATTCTTATTAACACTTTATGC AAATCAAGAAGGGTAGATGAAGCTCTCGAAGTTTTTGAAAAAATGCGTGGAAAGAGAACT GATGATGGAAATGTGATTAAAGCTGATTCGATTCATTTTAATACTCTCATTGACGGGCTC TGCAAGGTGGGGAGGTTGAAAGAAGCAGAGGAGTTATTGGTAAGGATGAAACTGGAAGAG AGATGTGCGCCCAATGCAGTTACTTACAATTGCTTGATTGATGGGTATTGCAGAGCTGGA AAGCTTGAGACGGCTAAAGAAGTCGTTTCTCGGATGAAAGAGGACGAGATTAAACCTAAT GTGGTAACTGTTAATACAATCGTTGGTGGGATGTGCAGGCACCATGGATTGAACATGGCG GTTGTATTCTTTATGGATATGGAAAAGGAAGGCGTGAAAGGGAATGTGGTTACTTATATG ACATTGATTCATGCTTGTTGCAGCGTCAGTAATGTAGAGAAGGCTATGTATTGGTATGAA AAAATGTTGGAAGCTGGTTGTTCTCCTGATGCAAAGATCTATTATGCTTTGATCTCTGGA TTGTGCCAAGTTAGACGGGATCATGACGCCATTAGAGTGGTGGAGAAACTGAAAGAAGGA GGGTTTTCTCTTGACTTATTGGCTTACAACATGCTTATTGGGTTGTTTTGTGATAAGAAT AATACAGAGAAAGTCTATGAGATGCTAACCGATATGGAAAAAGAAGGGAAGAAACCTGAT TCCATCACTTACAACACTCTGATTTCGTTTTTCGGTAAACACAAGGACTTCGAGAGTGTT GAGAGAATGATGGAGCAGATGAGAGAAGACGGGTTAGACCCGACTGTCACGACATATGGA GCGGTGATTGACGCTTATTGCTCAGTCGGCGAATTAGACGAAGCATTGAAGCTCTTTAAG GACATGGGTTTGCACTCAAAGGTCAATCCGAACACTGTAATATACAACATTCTCATAAAC GCATTTTCTAAGCTGGGGAATTTCGGGCAAGCGCTCTCTCTGAAAGAGGAAATGAAGATG AAGATGGTGAGACCTAATGTTGAAACTTACAATGCCTTGTTTAAGTGTCTTAACGAGAAA ACCCAAGGAGAGACATTACTTAAACTGATGGATGAGATGGTCGAACAGTCTTGTGAACCA AATCAGATCACAATGGAGATTCTAATGGAGCGTCTCTCAGGTTCTGATGAGTTAGTTAAG CTGAGGAAGTTTATGCAAGGCTACTCTGTTGCTTCGCCGACCGAGAAAGCTTCACCTTTC GATGTCTTTAGCTTGGGATAA

Peptide Sequence

PEP ID	AT3G61520.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:22768974-22771274 REVERSE LENGTH=766 \| 201606
Sequence	MSIMLSISRRRNSYILLNHSRFLRRFSYDVDPRPEIKLESQEFVVVKFVKTLQKTPQHDW ASSESLSALVVSSSSASPLVFSQITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQ SVIEFAGSEPDPRDKLLRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDS NMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTE EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNAL LSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRT DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAG KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG GFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV ERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILIN AFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEP NQITMEILMERLSGSDELVKLRKFMQGYSVASPTEKASPFDVFSLG

Transcript Sequence

Transcript ID	AT3G61520.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:22768843-22771404 REVERSE LENGTH=2562 \| 201606
Sequence	AGGTTTATTTGGGCTAAATATGTGTAAGCCCATTATTTAAAATGGGCCCAACTTCTTGTT CGTTGAATTCGCCGAACAGAGTTCGTCGTCTCACTTTTCCCGGTGGCCGTCTTTTTCAAA ACCTTAGACGATGAGTATCATGCTATCAATTTCCCGGCGCCGGAACTCTTATATTCTGCT CAACCATTCTCGATTCCTCCGTCGTTTTTCATATGATGTTGACCCACGGCCGGAAATCAA ATTGGAGAGCCAGGAATTTGTAGTAGTCAAATTTGTGAAAACTCTTCAAAAAACCCCGCA ACATGATTGGGCGTCGAGCGAGTCGCTAAGTGCGCTTGTCGTATCTTCTTCTTCTGCTTC TCCTTTAGTATTCTCGCAAATCACGCGGCGGCTAGGATCGTATTCTCTAGCAATCTCGTT CTTCGAGTACCTGGATGCGAAGTCTCAGTCTCTGAAACGCCGTGAAGAATCTCTCTCCTT GGCGCTTCAGTCGGTCATTGAATTCGCCGGTAGTGAACCGGACCCGCGTGATAAACTTCT CCGTCTCTACGAGATCGCCAAAGAGAAGAACATTCCTCTTACTGTCGTTGCCACTAATCT TCTGATCCGATGGTTTGGGCGTATGGGTATGGTGAATCAGTCGGTTCTTGTATACGAAAG ACTCGATTCGAATATGAAAAACTCGCAGGTTCGTAATGTTGTGGTAGACGTCTTGCTAAG AAATGGACTTGTGGATGATGCCTTCAAGGTGCTCGACGAAATGCTTCAGAAAGAATCTGT TTTTCCTCCTAATAGAATCACAGCGGATATTGTGTTACACGAGGTTTGGAAGGGAAGGCT TTTGACAGAAGAAAAGATAATTGCTTTGATTTCAAGATTTAGCTCTCATGGTGTCTCCCC AAACTCTGTTTGGTTGACTCGGTTTATATCAAGTCTATGCAAAAATGCTCGCGCCAATGC TGCTTGGGATATTTTGAGCGACCTGATGAAGAACAAAACCCCACTTGAAGCTCCTCCCTT CAATGCGCTTTTGTCTTGCTTAGGAAGGAATATGGACATTAGTAGAATGAATGATTTAGT CTTGAAGATGGATGAGGTGAAAATCCGGCCTGATGTTGTGACTTTAGGGATTCTTATTAA CACTTTATGCAAATCAAGAAGGGTAGATGAAGCTCTCGAAGTTTTTGAAAAAATGCGTGG AAAGAGAACTGATGATGGAAATGTGATTAAAGCTGATTCGATTCATTTTAATACTCTCAT TGACGGGCTCTGCAAGGTGGGGAGGTTGAAAGAAGCAGAGGAGTTATTGGTAAGGATGAA ACTGGAAGAGAGATGTGCGCCCAATGCAGTTACTTACAATTGCTTGATTGATGGGTATTG CAGAGCTGGAAAGCTTGAGACGGCTAAAGAAGTCGTTTCTCGGATGAAAGAGGACGAGAT TAAACCTAATGTGGTAACTGTTAATACAATCGTTGGTGGGATGTGCAGGCACCATGGATT GAACATGGCGGTTGTATTCTTTATGGATATGGAAAAGGAAGGCGTGAAAGGGAATGTGGT TACTTATATGACATTGATTCATGCTTGTTGCAGCGTCAGTAATGTAGAGAAGGCTATGTA TTGGTATGAAAAAATGTTGGAAGCTGGTTGTTCTCCTGATGCAAAGATCTATTATGCTTT GATCTCTGGATTGTGCCAAGTTAGACGGGATCATGACGCCATTAGAGTGGTGGAGAAACT GAAAGAAGGAGGGTTTTCTCTTGACTTATTGGCTTACAACATGCTTATTGGGTTGTTTTG TGATAAGAATAATACAGAGAAAGTCTATGAGATGCTAACCGATATGGAAAAAGAAGGGAA GAAACCTGATTCCATCACTTACAACACTCTGATTTCGTTTTTCGGTAAACACAAGGACTT CGAGAGTGTTGAGAGAATGATGGAGCAGATGAGAGAAGACGGGTTAGACCCGACTGTCAC GACATATGGAGCGGTGATTGACGCTTATTGCTCAGTCGGCGAATTAGACGAAGCATTGAA GCTCTTTAAGGACATGGGTTTGCACTCAAAGGTCAATCCGAACACTGTAATATACAACAT TCTCATAAACGCATTTTCTAAGCTGGGGAATTTCGGGCAAGCGCTCTCTCTGAAAGAGGA AATGAAGATGAAGATGGTGAGACCTAATGTTGAAACTTACAATGCCTTGTTTAAGTGTCT TAACGAGAAAACCCAAGGAGAGACATTACTTAAACTGATGGATGAGATGGTCGAACAGTC TTGTGAACCAAATCAGATCACAATGGAGATTCTAATGGAGCGTCTCTCAGGTTCTGATGA GTTAGTTAAGCTGAGGAAGTTTATGCAAGGCTACTCTGTTGCTTCGCCGACCGAGAAAGC TTCACCTTTCGATGTCTTTAGCTTGGGATAATGTTCGTTTAGATACAGTAACCATTACTA TAATGTTTTTAATAATTTCTTGATTATGCATTTTATATAATTACACAATCGCTATTTATT TATGTATGGTTATTTGCTAAATTTTGTTAAAATAAAAAATCC