Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G58590.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:21666262-21668487 FORWARD LENGTH=2226 \| 201606
Sequence	ATGAGCCTCAGCTGTGGAGATCTCGCCAATCACAACGATCGTGTAGTTAGCTTACTCAAT GTCTGCAGAAAAGCTCCTTCCTTTGCAAGGACCAAAGCTCTTCACGCTCTCTCCATCACT TTATGCTCTGTTCTTTTGCAGCCAGTTTATGTCTGCAATAACATTATCAGTCTTTATGAG AAGCTTGGCGAGGTATCACTTGCAGGCAAAGTGTTTGATCAAATGCCTGAGAGAAATAAA GTGTCTTTCAACACGATCATTAAAGGGTACAGCAAATACGGGGATGTTGATAAAGCTTGG GGTGTGTTCTCTGAGATGAGGTATTTTGGATATTTGCCGAACCAGTCAACAGTGAGTGGT TTATTGTCCTGTGCATCGTTGGATGTTCGTGCTGGAACTCAGTTGCACGGTTTGAGCTTG AAGTATGGCTTGTTTATGGCTGATGCATTTGTTGGTACTTGTTTGTTGTGTTTGTATGGG AGGCTTGACTTGCTGGAAATGGCGGAACAGGTTTTTGAAGATATGCCGTTTAAGAGCTTG GAAACATGGAACCATATGATGTCTTTGTTGGGGCATCGTGGTTTTCTCAAAGAATGCATG TTTTTCTTCCGTGAGCTTGTTAGGATGGGCGCTTCTTTAACTGAAAGCTCTTTCCTGGGT GTATTGAAGGGTGTATCTTGTGTAAAGGACTTGGATATTAGCAAACAGTTGCATTGCTCA GCAACGAAAAAAGGGTTAGATTGTGAAATATCCGTCGTTAACTCTCTCATCAGCGCATAT GGAAAATGTGGCAATACGCATATGGCAGAGAGAATGTTTCAGGATGCAGGTTCCTGGGAT ATAGTGTCATGGAACGCCATAATTTGTGCAACAGCCAAAAGTGAGAACCCGTTAAAAGCA CTCAAACTCTTTGTGAGTATGCCAGAGCATGGGTTTTCCCCGAACCAAGGTACATACGTT AGTGTTCTTGGTGTCTCTTCTCTTGTGCAGTTACTGAGTTGCGGACGCCAAATTCATGGC ATGCTAATTAAGAATGGCTGCGAAACTGGCATAGTTTTGGGGAATGCGTTGATTGACTTT TATGCTAAATGTGGTAATCTGGAAGATTCCCGCCTATGCTTCGATTATATACGTGATAAG AACATTGTTTGTTGGAATGCGCTGCTTTCGGGTTATGCCAATAAGGATGGTCCGATTTGT CTCTCTTTGTTTCTGCAAATGCTTCAAATGGGTTTCAGGCCAACTGAATATACTTTTTCG ACGGCCCTCAAATCTTGTTGTGTCACAGAGTTACAGCAGCTGCACTCTGTTATTGTGAGA ATGGGATATGAAGATAATGACTATGTCTTAAGCTCTCTTATGAGATCCTACGCCAAAAAT CAACTGATGAATGATGCTCTTCTTCTGCTGGATTGGGCTAGCGGGCCAACTTCGGTCGTC CCATTGAACATTGTTGCCGGAATCTATAGCAGAAGAGGCCAGTACCATGAATCTGTGAAG CTGATTTCGACACTAGAACAACCCGACACTGTATCTTGGAACATTGCAATTGCGGCCTGC TCTCGTTCTGATTACCATGAAGAGGTTATCGAACTTTTCAAACACATGCTTCAATCAAAC ATCCGCCCTGATAAGTACACATTCGTTAGTATCTTAAGTTTGTGTTCTAAGCTCTGTGAC CTTACTCTTGGGAGTTCTATTCATGGTTTGATCACCAAAACAGATTTCAGCTGCGCTGAC ACATTTGTATGTAACGTACTAATTGACATGTATGGGAAATGCGGAAGCATTAGGAGTGTA ATGAAAGTCTTTGAAGAAACAAGAGAGAAAAACCTCATTACATGGACGGCATTGATTTCG TGTCTTGGCATCCATGGATATGGACAGGAGGCACTTGAAAAGTTTAAGGAAACACTGTCT TTGGGTTTTAAGCCAGATCGTGTCTCGTTCATCTCTATTCTAACTGCTTGCAGACATGGT GGTATGGTAAAAGAAGGAATGGGTTTGTTTCAGAAAATGAAGGATTACGGTGTTGAACCA GAAATGGATCATTATCGTTGCGCCGTTGATCTTTTGGCAAGAAATGGTTACCTGAAGGAA GCTGAGCATCTGATTCGGGAAATGCCTTTCCCTGCAGATGCGCCTGTATGGCGTACATTT CTTGATGGTTGCAATAGATTTGCAGAAGAACAGAGAAACACTCTCAATGTCGTCTCTTTT CAGTAG

Peptide Sequence

PEP ID	AT3G58590.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:21666262-21668487 FORWARD LENGTH=741 \| 201606
Sequence	MSLSCGDLANHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYE KLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSG LLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSL ETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCS ATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKA LKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDF YAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFS TALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVV PLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSN IRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSV MKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHG GMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTF LDGCNRFAEEQRNTLNVVSFQ

Transcript Sequence

Transcript ID	AT3G58590.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:21666082-21668625 FORWARD LENGTH=2544 \| 201606
Sequence	CTAGATCAATTATTTAGTTCCCTGGTTCTGAACTTCAAACTTTGTTCTTGATGTTTATAA AAATCCGAACTTTTAAAATTTCAGACCTTTATTAGAACTTTCTTCATGATGCACGAAACT TAGTTCTTAATTATAACTGAGATCGATCTGGGAAGTACTCTGTTTTCAGTATCCTTCTGC ATGAGCCTCAGCTGTGGAGATCTCGCCAATCACAACGATCGTGTAGTTAGCTTACTCAAT GTCTGCAGAAAAGCTCCTTCCTTTGCAAGGACCAAAGCTCTTCACGCTCTCTCCATCACT TTATGCTCTGTTCTTTTGCAGCCAGTTTATGTCTGCAATAACATTATCAGTCTTTATGAG AAGCTTGGCGAGGTATCACTTGCAGGCAAAGTGTTTGATCAAATGCCTGAGAGAAATAAA GTGTCTTTCAACACGATCATTAAAGGGTACAGCAAATACGGGGATGTTGATAAAGCTTGG GGTGTGTTCTCTGAGATGAGGTATTTTGGATATTTGCCGAACCAGTCAACAGTGAGTGGT TTATTGTCCTGTGCATCGTTGGATGTTCGTGCTGGAACTCAGTTGCACGGTTTGAGCTTG AAGTATGGCTTGTTTATGGCTGATGCATTTGTTGGTACTTGTTTGTTGTGTTTGTATGGG AGGCTTGACTTGCTGGAAATGGCGGAACAGGTTTTTGAAGATATGCCGTTTAAGAGCTTG GAAACATGGAACCATATGATGTCTTTGTTGGGGCATCGTGGTTTTCTCAAAGAATGCATG TTTTTCTTCCGTGAGCTTGTTAGGATGGGCGCTTCTTTAACTGAAAGCTCTTTCCTGGGT GTATTGAAGGGTGTATCTTGTGTAAAGGACTTGGATATTAGCAAACAGTTGCATTGCTCA GCAACGAAAAAAGGGTTAGATTGTGAAATATCCGTCGTTAACTCTCTCATCAGCGCATAT GGAAAATGTGGCAATACGCATATGGCAGAGAGAATGTTTCAGGATGCAGGTTCCTGGGAT ATAGTGTCATGGAACGCCATAATTTGTGCAACAGCCAAAAGTGAGAACCCGTTAAAAGCA CTCAAACTCTTTGTGAGTATGCCAGAGCATGGGTTTTCCCCGAACCAAGGTACATACGTT AGTGTTCTTGGTGTCTCTTCTCTTGTGCAGTTACTGAGTTGCGGACGCCAAATTCATGGC ATGCTAATTAAGAATGGCTGCGAAACTGGCATAGTTTTGGGGAATGCGTTGATTGACTTT TATGCTAAATGTGGTAATCTGGAAGATTCCCGCCTATGCTTCGATTATATACGTGATAAG AACATTGTTTGTTGGAATGCGCTGCTTTCGGGTTATGCCAATAAGGATGGTCCGATTTGT CTCTCTTTGTTTCTGCAAATGCTTCAAATGGGTTTCAGGCCAACTGAATATACTTTTTCG ACGGCCCTCAAATCTTGTTGTGTCACAGAGTTACAGCAGCTGCACTCTGTTATTGTGAGA ATGGGATATGAAGATAATGACTATGTCTTAAGCTCTCTTATGAGATCCTACGCCAAAAAT CAACTGATGAATGATGCTCTTCTTCTGCTGGATTGGGCTAGCGGGCCAACTTCGGTCGTC CCATTGAACATTGTTGCCGGAATCTATAGCAGAAGAGGCCAGTACCATGAATCTGTGAAG CTGATTTCGACACTAGAACAACCCGACACTGTATCTTGGAACATTGCAATTGCGGCCTGC TCTCGTTCTGATTACCATGAAGAGGTTATCGAACTTTTCAAACACATGCTTCAATCAAAC ATCCGCCCTGATAAGTACACATTCGTTAGTATCTTAAGTTTGTGTTCTAAGCTCTGTGAC CTTACTCTTGGGAGTTCTATTCATGGTTTGATCACCAAAACAGATTTCAGCTGCGCTGAC ACATTTGTATGTAACGTACTAATTGACATGTATGGGAAATGCGGAAGCATTAGGAGTGTA ATGAAAGTCTTTGAAGAAACAAGAGAGAAAAACCTCATTACATGGACGGCATTGATTTCG TGTCTTGGCATCCATGGATATGGACAGGAGGCACTTGAAAAGTTTAAGGAAACACTGTCT TTGGGTTTTAAGCCAGATCGTGTCTCGTTCATCTCTATTCTAACTGCTTGCAGACATGGT GGTATGGTAAAAGAAGGAATGGGTTTGTTTCAGAAAATGAAGGATTACGGTGTTGAACCA GAAATGGATCATTATCGTTGCGCCGTTGATCTTTTGGCAAGAAATGGTTACCTGAAGGAA GCTGAGCATCTGATTCGGGAAATGCCTTTCCCTGCAGATGCGCCTGTATGGCGTACATTT CTTGATGGTTGCAATAGATTTGCAGAAGAACAGAGAAACACTCTCAATGTCGTCTCTTTT CAGTAGTTGAAGAAAGTAGAATTGGAAGAGATGTGCGAATTTTTTGATATTTATCTGATG TTTCTCTTGCAAAGCTCATATCTGTATATGGAGAAAATGAAACCTTTAGAGTTTTGTCTA TCTAATCACAAGTTCAGAGAAATA