Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G57587.1
CDS Infomation	\| Ta11-like non-LTR retrotransposon \| Chr3:21328263-21329357 FORWARD LENGTH=1095 \| 201606
Sequence	ATGGCAGATGAATTGTGGGATGAAATTCAAGGCCTGGATCTAGGTCCTGAGGATCCAGCC CTCTTCATTCCCCATGAAGCTTATGTGTATGTTGAAGAGTTCAATCGACTGAGTATAATT GCAAGACCTCTCAACCCAAGAGTCCAAAACTTGAACGCGGTGATTGCAGCCTTACCTCGG TACTGGGGAATGACGGTGCATGTCCATGGAAGAATTCTGGATGCAACTTATGTTCAATTT CTCTTCCAAAATGAAGTTGACTTGCAGTCAGTACAAAGAAGAGAACCATGGATTTTCAAC AACTGGTTCGTGGCTACTCAAAGATGGGAACCTGCTCCTGCTCTTAACTTTGTTACTTCT ATTGATCTTTGGGTGCAGATTAGAGGAATTCCCCTGCCCTATGTGTGTGAAGAGACGGCT CTAGAGATAGCACGTGACTTAGGAGAAGTCATCATGCTGGATCATCATGACGCAACATCT ACTCAAATTACTTATATCCGAGTTAGAGTGCGTTTTGGCATCACAGACAGGCTCAGATTC TTCCAACGAATCATCTTTGATTCGGGAGAAGTGGTTACCATCAGATTTCAATATGAGCGC CTCAGAAGAATCTGTAGCAGTTGCTTCAGGTTTACGCACAACAGAGCTTATTGTCCCTAT AGACCACGTCCCCACAGCATAGCCAGAGAAAGAGCTGTCTTCAGAGACAGTGTTCATAGG TCAAGCTTGAACTCTCAATCGCAGATGACGGAGACTTCATTTCCTGCTCCTGTGACACCG CCTCCTAGAATTGCTCATCCACCACTGAATCCTGAAGAATTGAGAGCTGCGTATCCATAC TATGCATCAGTTAGAGATACTCATACATTACATGTTGGAGAATCTAGTACTGCAAGACAA CAATGGTCATCGAGTTCTAGTACCACTCCAACAAGAGCAGACACTCCTAATCATGATAAC AACAGAGTCTTTGAAGTCGGTCAATCCTCAAGAAGACAGGAAGTAAGAAGAGAAGCAGAG GATCCTAGACTTCAAACTCGTCTACACAGTGCTTCAAGAATGGGAGAGAGTCTGAAACCT CCCAAAAAGAGATAA

Peptide Sequence

PEP ID	AT3G57587.1
PEP Infomation	\| Ta11-like non-LTR retrotransposon \| Chr3:21328263-21329357 FORWARD LENGTH=364 \| 201606
Sequence	MADELWDEIQGLDLGPEDPALFIPHEAYVYVEEFNRLSIIARPLNPRVQNLNAVIAALPR YWGMTVHVHGRILDATYVQFLFQNEVDLQSVQRREPWIFNNWFVATQRWEPAPALNFVTS IDLWVQIRGIPLPYVCEETALEIARDLGEVIMLDHHDATSTQITYIRVRVRFGITDRLRF FQRIIFDSGEVVTIRFQYERLRRICSSCFRFTHNRAYCPYRPRPHSIARERAVFRDSVHR SSLNSQSQMTETSFPAPVTPPPRIAHPPLNPEELRAAYPYYASVRDTHTLHVGESSTARQ QWSSSSSTTPTRADTPNHDNNRVFEVGQSSRRQEVRREAEDPRLQTRLHSASRMGESLKP PKKR

Transcript Sequence

Transcript ID	AT3G57587.1
Transcript Infomation	\| Ta11-like non-LTR retrotransposon \| Chr3:21328263-21329634 FORWARD LENGTH=1372 \| 201606
Sequence	ATGGCAGATGAATTGTGGGATGAAATTCAAGGCCTGGATCTAGGTCCTGAGGATCCAGCC CTCTTCATTCCCCATGAAGCTTATGTGTATGTTGAAGAGTTCAATCGACTGAGTATAATT GCAAGACCTCTCAACCCAAGAGTCCAAAACTTGAACGCGGTGATTGCAGCCTTACCTCGG TACTGGGGAATGACGGTGCATGTCCATGGAAGAATTCTGGATGCAACTTATGTTCAATTT CTCTTCCAAAATGAAGTTGACTTGCAGTCAGTACAAAGAAGAGAACCATGGATTTTCAAC AACTGGTTCGTGGCTACTCAAAGATGGGAACCTGCTCCTGCTCTTAACTTTGTTACTTCT ATTGATCTTTGGGTGCAGATTAGAGGAATTCCCCTGCCCTATGTGTGTGAAGAGACGGCT CTAGAGATAGCACGTGACTTAGGAGAAGTCATCATGCTGGATCATCATGACGCAACATCT ACTCAAATTACTTATATCCGAGTTAGAGTGCGTTTTGGCATCACAGACAGGCTCAGATTC TTCCAACGAATCATCTTTGATTCGGGAGAAGTGGTTACCATCAGATTTCAATATGAGCGC CTCAGAAGAATCTGTAGCAGTTGCTTCAGGTTTACGCACAACAGAGCTTATTGTCCCTAT AGACCACGTCCCCACAGCATAGCCAGAGAAAGAGCTGTCTTCAGAGACAGTGTTCATAGG TCAAGCTTGAACTCTCAATCGCAGATGACGGAGACTTCATTTCCTGCTCCTGTGACACCG CCTCCTAGAATTGCTCATCCACCACTGAATCCTGAAGAATTGAGAGCTGCGTATCCATAC TATGCATCAGTTAGAGATACTCATACATTACATGTTGGAGAATCTAGTACTGCAAGACAA CAATGGTCATCGAGTTCTAGTACCACTCCAACAAGAGCAGACACTCCTAATCATGATAAC AACAGAGTCTTTGAAGTCGGTCAATCCTCAAGAAGACAGGAAGTAAGAAGAGAAGCAGAG GATCCTAGACTTCAAACTCGTCTACACAGTGCTTCAAGAATGGGAGAGAGTCTGAAACCT CCCAAAAAGAGATAACCACTCTAACAAGACTTCTGTCAATTTTTGTTGAAGACTACAGGG AATCTAGGATAGCAGCTTCAAGTAGTTGGATATGTTTTTTTGGTTCTGACATATCCTTAA CTTTGTTAAGTTTCAGGTTTATTATTTCATGTTTCTCGTTTTACTTCTAAGATCATCTTG TTATGTTTGAATCAAAGGTTTGTAAGTGGTTAGACCACTCAAACACTTTTTGTAAGAACA CAATGACATGAATGAATGAAAGATAACTTTTAGGGAAAAAAAAAAAAAAAAA