Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G57350.1
CDS Infomation	\| Nucleoporin interacting component (Nup93/Nic96-like) family protein \| Chr3:21220606-21225305 REVERSE LENGTH=2583 \| 201606
Sequence	ATGGCGAACGACCAGGAGATGAGTGGATGGACTGATCTTCTCCATTCTTCGACTAAGCTT CTGGAGCAAGCGGCTCCTTCTTCTCAGTTTCCTCCTCTTCAGAGGAATTTGGATCAATTG GAAGCATTGTCGAGGAAACTCAAAGCTAAAACCCTAAGAAACGAAGCTCCTTCACAGTCT ATTGCTGCCACTAGACTACTTGCACGGGAGGGAATCAATGCAGATCAATTATCTCGTGAT CTTAAGTCATTTGAGTTGAAGACGACTTTTGAAGATGTATTCCCTGCGGAGACAACAAGT GTTGAAGAATACCTGCAACAGGTTCATGAAATGGCAATGGTATCGGCTATACAGGAGGCC CAGAAAGATAATGTTCGAAGCTTTAACAACTACATGTTGAAAGTGTTGGAGGAGGACTGT ATAAAAGAAAAACGTGACTTTCTTCACAGCCTTAGCAAAACTTCAATGTTACCTAAGACC AAGATGATCAATTCAAGTAGAGGCTCTCATGCTGGTTCACTAGTGCCTTTGAGTCCCCAA GTATCTTCAAAACCTGGAACGGAACTCGTGTCTATGACTAACAAACCCATTCATGAGAAA AAGGCATATGTCTATGCCGAGGTTGTGAAAAAACTAAACTCTGCAAGAGAACGAGGCTTG CCATTTAAACTTGCAACATTGTTCAACGGTGCATATGAAAGTCTAGAAATTGATTTGACT CGTGGAAAATCAGTCAACATGCAAAAATTATGGCAGCTTATTCAGGGAATGACGGGTGAA GAGTCAGCAGTACAACATGGTGTTTCCAAGAGGATGGCCCTCGTGATAGGTGCAAGACGC CACTTGGAATGTGGGCATGGGAAACATATAATGGATACAATTCAAAGTCATCCTACACAA GCTGCTCTTGGTGGATCAGTTGGAAATTTGCAAAGAATTCGTGCTTTTCTTCGGATTCGT CTGAGAGATTATGGGAGTTTGGACTTTGATTCAGTTGATGCTCGTAGGCAGCCTCCAGTT GATACTACTTGGCAGCAGATATATTTTTGCTTGAGAACTGGTTATTATGAGGAAGCTAGA GAAATTGCCCAGTCATCTCGGTCATCTCAACAACAGTTTGCTCCTCTGCTTACAGAGTGG ATTACAACAGGTGGTACTGTGGCTGCACAAACCGCTGCTACTGCTTCTGAGGAATGTGAG AAATTGTTAAGGATGGGTGATCGGTTTGGCCAAACAACATATGACAAGAAGAAGCTTCTA CTCTACACTATCATATCTGGTTCCCGAAGACAAATTGATCGCATCATGAGAGATTTTTCG ACCCTCTTTAACACAATAGAAGATTTTCTCTGGTTCAAACTATCATGTGTACGTGACGTA GCTGGTGGATCTTCATCTATGATCGTGAATGATGGGCTAGTGCCATACAGTTTGGATGAT CTCCAGGCCTATCTTAATAAGTTTGAGCCATCTTACTACACTAAGAATGGGAAAGACCCT CTGGTATACCCATATGTTTTGCTTCTTAGCATTCAGTTACTACCGGCGATCATGCACATG TCCAACGAAGCTGGAGATGAAGGGTATAACATTGATGCTGTCCATGTAGCTATATCGCTA GTGGACCATTCCATTCTCTCTGAAGGATCTGGGACTGGGCGCAAACTAAGTGTGATGGAT GCTAATGCCGAGGCATCTAGCATGATTAGGCAATATGGGTCGATGTATTTGCATCATGGT GATCTGCAAATGACGCTGGAATACTATGCACAAGCTGCTATTGCAGTAGGTGGGGGTCAA CAGGCTTGGTCTGGAAGAAGTAATGTTGATCAACAAAGGCAAAGGAACTTGATGCTGAAG CAACTACTGACTGAGATTTTGTCACAAGAGGATGGTATTCACTTTCTGCTTGGTGCTAGA GGTTCCGGTGAAGAAGGCGAGCTTGGAAGATTTCTGCCTGATATAAAATTGAGGCAGCAG TTCTTGATCGAAGCTGCGCATCAATTTCAAGAAGCTGGATTATATGACAAATCAATAGAA CTACAGAAGAGAGTTGGTGCGTTTTCGTCTGCCTTGGAAACGATAAACAAATGTCTATCT GAAGCCATTTGCTCCCTTGTCCGTGGAAGGCCAGATGGTGAAAGCCGAACAGAGGGGCTT GTTCTCTCGGGCAATGACATTCTCAATTCTTACAAATATCACCCTGATGTCAGTGCCCAG GAAAGACATCTTGTTATGGAACAAGAAACAATACTAAGAGAGCTTGAGGCAATATTATCG ATCCACAAGTTGGCCAGACTAAACAAACATCTAGATGCCATAAGAGAAGTCGCGAAACTT CCATTCCTTCATCTCGATCCAAGACAACCAGACACCACCTCGGATGAGTTCCAGAAAGCA TCTTCTTACTTTCAGACTTGTGTCCCTGATTTACTTAAGGTTGCTCTGACCTGTTTGGAT AACGTAGCTGACACTGATGGATCAATCAGGGGCATGAGATCTAAGATTGCTGGGTTTCTT GCAAGCAACACACAGCGGAACTGGCCTCGAGATTTGTACGAGAAGATAGCTCGAAGCTTT TGA

Peptide Sequence

PEP ID	AT3G57350.1
PEP Infomation	\| Nucleoporin interacting component (Nup93/Nic96-like) family protein \| Chr3:21220606-21225305 REVERSE LENGTH=860 \| 201606
Sequence	MANDQEMSGWTDLLHSSTKLLEQAAPSSQFPPLQRNLDQLEALSRKLKAKTLRNEAPSQS IAATRLLAREGINADQLSRDLKSFELKTTFEDVFPAETTSVEEYLQQVHEMAMVSAIQEA QKDNVRSFNNYMLKVLEEDCIKEKRDFLHSLSKTSMLPKTKMINSSRGSHAGSLVPLSPQ VSSKPGTELVSMTNKPIHEKKAYVYAEVVKKLNSARERGLPFKLATLFNGAYESLEIDLT RGKSVNMQKLWQLIQGMTGEESAVQHGVSKRMALVIGARRHLECGHGKHIMDTIQSHPTQ AALGGSVGNLQRIRAFLRIRLRDYGSLDFDSVDARRQPPVDTTWQQIYFCLRTGYYEEAR EIAQSSRSSQQQFAPLLTEWITTGGTVAAQTAATASEECEKLLRMGDRFGQTTYDKKKLL LYTIISGSRRQIDRIMRDFSTLFNTIEDFLWFKLSCVRDVAGGSSSMIVNDGLVPYSLDD LQAYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAIMHMSNEAGDEGYNIDAVHVAISL VDHSILSEGSGTGRKLSVMDANAEASSMIRQYGSMYLHHGDLQMTLEYYAQAAIAVGGGQ QAWSGRSNVDQQRQRNLMLKQLLTEILSQEDGIHFLLGARGSGEEGELGRFLPDIKLRQQ FLIEAAHQFQEAGLYDKSIELQKRVGAFSSALETINKCLSEAICSLVRGRPDGESRTEGL VLSGNDILNSYKYHPDVSAQERHLVMEQETILRELEAILSIHKLARLNKHLDAIREVAKL PFLHLDPRQPDTTSDEFQKASSYFQTCVPDLLKVALTCLDNVADTDGSIRGMRSKIAGFL ASNTQRNWPRDLYEKIARSF

Transcript Sequence

Transcript ID	AT3G57350.1
Transcript Infomation	\| Nucleoporin interacting component (Nup93/Nic96-like) family protein \| Chr3:21220387-21225424 REVERSE LENGTH=2921 \| 201606
Sequence	CCCGAACCAATTAAACCGGTTTGAGTAAGTGGAGAAAAAAACTGATTTTAAAATGTTCGA ATCCTAAACCCTTGACATTCTTCTGCTGAGTTCTCCTGAAGCTCAAACTCTCAATAAGTA TGGCGAACGACCAGGAGATGAGTGGATGGACTGATCTTCTCCATTCTTCGACTAAGCTTC TGGAGCAAGCGGCTCCTTCTTCTCAGTTTCCTCCTCTTCAGAGGAATTTGGATCAATTGG AAGCATTGTCGAGGAAACTCAAAGCTAAAACCCTAAGAAACGAAGCTCCTTCACAGTCTA TTGCTGCCACTAGACTACTTGCACGGGAGGGAATCAATGCAGATCAATTATCTCGTGATC TTAAGTCATTTGAGTTGAAGACGACTTTTGAAGATGTATTCCCTGCGGAGACAACAAGTG TTGAAGAATACCTGCAACAGGTTCATGAAATGGCAATGGTATCGGCTATACAGGAGGCCC AGAAAGATAATGTTCGAAGCTTTAACAACTACATGTTGAAAGTGTTGGAGGAGGACTGTA TAAAAGAAAAACGTGACTTTCTTCACAGCCTTAGCAAAACTTCAATGTTACCTAAGACCA AGATGATCAATTCAAGTAGAGGCTCTCATGCTGGTTCACTAGTGCCTTTGAGTCCCCAAG TATCTTCAAAACCTGGAACGGAACTCGTGTCTATGACTAACAAACCCATTCATGAGAAAA AGGCATATGTCTATGCCGAGGTTGTGAAAAAACTAAACTCTGCAAGAGAACGAGGCTTGC CATTTAAACTTGCAACATTGTTCAACGGTGCATATGAAAGTCTAGAAATTGATTTGACTC GTGGAAAATCAGTCAACATGCAAAAATTATGGCAGCTTATTCAGGGAATGACGGGTGAAG AGTCAGCAGTACAACATGGTGTTTCCAAGAGGATGGCCCTCGTGATAGGTGCAAGACGCC ACTTGGAATGTGGGCATGGGAAACATATAATGGATACAATTCAAAGTCATCCTACACAAG CTGCTCTTGGTGGATCAGTTGGAAATTTGCAAAGAATTCGTGCTTTTCTTCGGATTCGTC TGAGAGATTATGGGAGTTTGGACTTTGATTCAGTTGATGCTCGTAGGCAGCCTCCAGTTG ATACTACTTGGCAGCAGATATATTTTTGCTTGAGAACTGGTTATTATGAGGAAGCTAGAG AAATTGCCCAGTCATCTCGGTCATCTCAACAACAGTTTGCTCCTCTGCTTACAGAGTGGA TTACAACAGGTGGTACTGTGGCTGCACAAACCGCTGCTACTGCTTCTGAGGAATGTGAGA AATTGTTAAGGATGGGTGATCGGTTTGGCCAAACAACATATGACAAGAAGAAGCTTCTAC TCTACACTATCATATCTGGTTCCCGAAGACAAATTGATCGCATCATGAGAGATTTTTCGA CCCTCTTTAACACAATAGAAGATTTTCTCTGGTTCAAACTATCATGTGTACGTGACGTAG CTGGTGGATCTTCATCTATGATCGTGAATGATGGGCTAGTGCCATACAGTTTGGATGATC TCCAGGCCTATCTTAATAAGTTTGAGCCATCTTACTACACTAAGAATGGGAAAGACCCTC TGGTATACCCATATGTTTTGCTTCTTAGCATTCAGTTACTACCGGCGATCATGCACATGT CCAACGAAGCTGGAGATGAAGGGTATAACATTGATGCTGTCCATGTAGCTATATCGCTAG TGGACCATTCCATTCTCTCTGAAGGATCTGGGACTGGGCGCAAACTAAGTGTGATGGATG CTAATGCCGAGGCATCTAGCATGATTAGGCAATATGGGTCGATGTATTTGCATCATGGTG ATCTGCAAATGACGCTGGAATACTATGCACAAGCTGCTATTGCAGTAGGTGGGGGTCAAC AGGCTTGGTCTGGAAGAAGTAATGTTGATCAACAAAGGCAAAGGAACTTGATGCTGAAGC AACTACTGACTGAGATTTTGTCACAAGAGGATGGTATTCACTTTCTGCTTGGTGCTAGAG GTTCCGGTGAAGAAGGCGAGCTTGGAAGATTTCTGCCTGATATAAAATTGAGGCAGCAGT TCTTGATCGAAGCTGCGCATCAATTTCAAGAAGCTGGATTATATGACAAATCAATAGAAC TACAGAAGAGAGTTGGTGCGTTTTCGTCTGCCTTGGAAACGATAAACAAATGTCTATCTG AAGCCATTTGCTCCCTTGTCCGTGGAAGGCCAGATGGTGAAAGCCGAACAGAGGGGCTTG TTCTCTCGGGCAATGACATTCTCAATTCTTACAAATATCACCCTGATGTCAGTGCCCAGG AAAGACATCTTGTTATGGAACAAGAAACAATACTAAGAGAGCTTGAGGCAATATTATCGA TCCACAAGTTGGCCAGACTAAACAAACATCTAGATGCCATAAGAGAAGTCGCGAAACTTC CATTCCTTCATCTCGATCCAAGACAACCAGACACCACCTCGGATGAGTTCCAGAAAGCAT CTTCTTACTTTCAGACTTGTGTCCCTGATTTACTTAAGGTTGCTCTGACCTGTTTGGATA ACGTAGCTGACACTGATGGATCAATCAGGGGCATGAGATCTAAGATTGCTGGGTTTCTTG CAAGCAACACACAGCGGAACTGGCCTCGAGATTTGTACGAGAAGATAGCTCGAAGCTTTT GAATCTAAGAAATTCGAATACTTGTCTAAAAAAGATCTTGTAAGAAGCTGTTAAACCCAT TTTTGTTACTTAACCTCGAGGATCACTTTTTGTTTTTTCTTCTTTTGGGCTCAAACAGGC ATGGTTAGCAAAAGCAAAATCTTAACATAGAGATAATCACACAAAATCCAAAGATCGTAT GTTAGGTTCTAAAGCATTATAATCCAAAACAAAAGAAAACA