Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G56590.2
CDS Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr3:20965105-20967784 FORWARD LENGTH=1470 \| 201606
Sequence	ATGGGGAAGAATACCGTCGAGGAGCAGAATCTCCCTGTGAGCGACGGAGCTGCTTCGGCT AGGAATAACGGAGGTGGAGGAATAAGCACATGTTGTTGCTGCGATTGGATCTCTAGCTAC TTTAGTCTCAGATGCGTTTTGATTCTTGCTTTTTCTGCTGCTGTGTTTCTCTCCGCCTTG TTTTGGTTACCTCCATTCCTCGGATTTGCAGATCCAGGGGATCTAGATCTCGATCCAAGG TTTAAAGATCACAGAATAGTGGCGAGTTTTGATGTTGGAAAACCAATTTCGTTCATGGAA GACAATTTGATGCAGCTTGAGAATGATATCACTGATGAAATAAGCTTTCCCATGACCAAA GTTGTGGTATTAGCGCTTGAACGCTTGGGTGATCTTAACAGAACAATGGTTATTTTTGCC ATTGATCCTGAGAAGGAGAATTCTAAGATACCTGCCGAAATAGAGAGTCTGATCAAGGCA GCTTTTGAAACTCTGGTCCAAAAGCAGTTGTCTTTCCGTTTGACTGAATCCTTGTTTGGG GAACCATTCTTTTTCGAGGTGCTAAAATTCCCTGGAGGAATCACTGTGATCCCTCCCCAG CCTATATTTCCCCTGCAGAAGGCCCAACTTCTTTTCAACTTCACATTAAACTTTTCGATT TACCAAATTCAATCAAACTTTGAGGAACTCGCTAGCCAGCTGAAGAAGGGCATAAATCTG GCTTCCTATGAGAACTTGTACATAACCTTGTCAAATTCCAGAGGTTCAACAGTGGCGCCT CCTACTATAGTTCATTCTTCTGTTCTACTCACATTCGGTTCATCTTCGAGGTTGAAGCAA CTTGCTCAAACTATCACTAGCTCCCATTCCAAAAATCTCGGCCTAAACCATACCGTATTT GGTAAGGTTAAGCAAGTCCGTCTTTCCTCAATCTTGCCACATTCACCTGCCACATCATCA ACCCCTTCCCCTTCTCCTCAACCTGAAACCCACCAATACCCCCATCATCATCCTCATCAT CATCACCACCATCATGAACTTGCTCCAGAACCTTCACTCTCACCTCCAACTAAAGGCTTT GCACCTGCATCAGCGCCAACCAAACACTCACCTTTACCCCCGAGAAACCCGCCTTGCCCT TACGAGCAGAGGAGACCAAAAGGAAACAGTGCTCTAAACCATCATACTGCACCACCAACG CCTGCACCACACCGGTCTCAGCCACACCCACCAGCACCAAACCCAGCCCCGCCACGTCAT CATGCCATACCAGTATCTAGCCCACTTCCCCACGTTGTATTTGCTCATATCCCACCTCCA TCAAAAAGCAGCCCAGAATCAGAACCTACAGGCGAAAAATCTCCCTCACCTGCTCCAACC CCATCTTCTGCGAGCATTGGTCCAACCTTCAAAAAGGCATCATCACAGCTCCTTGTAGTA GTAGTAGCCGTCATAATCATCTGTCTGTAA

Peptide Sequence

PEP ID	AT3G56590.2
PEP Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr3:20965105-20967784 FORWARD LENGTH=489 \| 201606
Sequence	MGKNTVEEQNLPVSDGAASARNNGGGGISTCCCCDWISSYFSLRCVLILAFSAAVFLSAL FWLPPFLGFADPGDLDLDPRFKDHRIVASFDVGKPISFMEDNLMQLENDITDEISFPMTK VVVLALERLGDLNRTMVIFAIDPEKENSKIPAEIESLIKAAFETLVQKQLSFRLTESLFG EPFFFEVLKFPGGITVIPPQPIFPLQKAQLLFNFTLNFSIYQIQSNFEELASQLKKGINL ASYENLYITLSNSRGSTVAPPTIVHSSVLLTFGSSSRLKQLAQTITSSHSKNLGLNHTVF GKVKQVRLSSILPHSPATSSTPSPSPQPETHQYPHHHPHHHHHHHELAPEPSLSPPTKGF APASAPTKHSPLPPRNPPCPYEQRRPKGNSALNHHTAPPTPAPHRSQPHPPAPNPAPPRH HAIPVSSPLPHVVFAHIPPPSKSSPESEPTGEKSPSPAPTPSSASIGPTFKKASSQLLVV VVAVIIICL

Transcript Sequence

Transcript ID	AT3G56590.2
Transcript Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr3:20964643-20968195 FORWARD LENGTH=2343 \| 201606
Sequence	TTTCATTAAAAATGTGGTATCTTGCATAATGACAATAAGTATAAATAATAATAAAATTTT CGAAATTTCAAACTGACACGAGCTCACACCCACTAGTGCAACTGCTCTGTACATATAGTA AACAAATGTTAAATGTAGAAGAAGAAAAAAAGACCAAGATATACCCTTTGTCACAAATTA GAAAAAGAAAGAAAGAGGATCCTTATTGTCATTTGCAGAGAAAGCTACTTCACTCCTTTC TCTTCCTTCGTCTCTCCGTCTCCCTCAGCCCTACATTTTCTGTTTCCGTCTACAAGAACC ACTTTGTTGCTTCCTTTTCGAGCATCGTCTTCGTCTTCTACAAATTTTGTTTGTTGCTTG GTTTTGAAGCCGGCCTTTGATGGGTGCGGCAGAATCTGGAACCGATCGGAGAAGCTTAGC TTATGGATTTGGAGTTTCTCTGTGAATGAATCTCTGTTTGTTATGGGGAAGAATACCGTC GAGGAGCAGAATCTCCCTGTGAGCGACGGAGCTGCTTCGGCTAGGAATAACGGAGGTGGA GGAATAAGCACATGTTGTTGCTGCGATTGGATCTCTAGCTACTTTAGTCTCAGATGCGTT TTGATTCTTGCTTTTTCTGCTGCTGTGTTTCTCTCCGCCTTGTTTTGGTTACCTCCATTC CTCGGATTTGCAGATCCAGGGGATCTAGATCTCGATCCAAGGTTTAAAGATCACAGAATA GTGGCGAGTTTTGATGTTGGAAAACCAATTTCGTTCATGGAAGACAATTTGATGCAGCTT GAGAATGATATCACTGATGAAATAAGCTTTCCCATGACCAAAGTTGTGGTATTAGCGCTT GAACGCTTGGGTGATCTTAACAGAACAATGGTTATTTTTGCCATTGATCCTGAGAAGGAG AATTCTAAGATACCTGCCGAAATAGAGAGTCTGATCAAGGCAGCTTTTGAAACTCTGGTC CAAAAGCAGTTGTCTTTCCGTTTGACTGAATCCTTGTTTGGGGAACCATTCTTTTTCGAG GTGCTAAAATTCCCTGGAGGAATCACTGTGATCCCTCCCCAGCCTATATTTCCCCTGCAG AAGGCCCAACTTCTTTTCAACTTCACATTAAACTTTTCGATTTACCAAATTCAATCAAAC TTTGAGGAACTCGCTAGCCAGCTGAAGAAGGGCATAAATCTGGCTTCCTATGAGAACTTG TACATAACCTTGTCAAATTCCAGAGGTTCAACAGTGGCGCCTCCTACTATAGTTCATTCT TCTGTTCTACTCACATTCGGTTCATCTTCGAGGTTGAAGCAACTTGCTCAAACTATCACT AGCTCCCATTCCAAAAATCTCGGCCTAAACCATACCGTATTTGGTAAGGTTAAGCAAGTC CGTCTTTCCTCAATCTTGCCACATTCACCTGCCACATCATCAACCCCTTCCCCTTCTCCT CAACCTGAAACCCACCAATACCCCCATCATCATCCTCATCATCATCACCACCATCATGAA CTTGCTCCAGAACCTTCACTCTCACCTCCAACTAAAGGCTTTGCACCTGCATCAGCGCCA ACCAAACACTCACCTTTACCCCCGAGAAACCCGCCTTGCCCTTACGAGCAGAGGAGACCA AAAGGAAACAGTGCTCTAAACCATCATACTGCACCACCAACGCCTGCACCACACCGGTCT CAGCCACACCCACCAGCACCAAACCCAGCCCCGCCACGTCATCATGCCATACCAGTATCT AGCCCACTTCCCCACGTTGTATTTGCTCATATCCCACCTCCATCAAAAAGCAGCCCAGAA TCAGAACCTACAGGCGAAAAATCTCCCTCACCTGCTCCAACCCCATCTTCTGCGAGCATT GGTCCAACCTTCAAAAAGGCATCATCACAGCTCCTTGTAGTAGTAGTAGCCGTCATAATC ATCTGTCTGTAAAACAAAAAACAAAAAAAAAACGCCGGAAGAAGCTGCTTTTTAAGTCCA AGCTGGAAAAATCAGCAGCAGTTCACAAAAGCACAACTTCTCCGGGTCACAACATCAATC AAGGTAATTGTATAAAGGAACACAAGGAACAAAAAATGTATGTATGAAAAAATGAAGAGA GTTTTTTTTTGTAAAAGAGTTGTTGAGGTTTGCAGCACAAAAGTGTGTCTTGCACCTTAC ATCCGAGAAAAAAAGAAAAAACATATATATAAACAAAAAAAAAAATTTCTGTTTTAATTT TTGTATATAAAGTAATCTTGTTTTAACCAATTTGTGTGTTTTCTGCTCGAAGATCTCTTT CTAGGGTTTTCATAATGAATATTTTATGTATGGATCAAAATCATGATACATCTTCTACGT TAT