Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G55480.2
CDS Infomation	\| protein affected traf%26#64257%3Bcking 2 \| Chr3:20566372-20571171 REVERSE LENGTH=3348 \| 201606
Sequence	ATGTTCAATAAGTTTGGTTCGACGTCGGAGACTCTTAGCAAAGCTTCAGCTGGGTTGCTT CGGATCGGCACTGACGCTCATCTTTATGATGATCCGGAAGACGTCAACATTGCTCCACTT CTCGATAGCAAGTTCGAATCTGAGAAATGTGAAGCTCTTAAGCGTCTCCTTGCTCTTATC GCTCAAGGCTTTGATGTCTCCAATTTCTTTCCTCAGGTGGTGAAGAATGTGGCGTCACAG TCATCGGAAGTGAAGAAGCTTGTTTACTTGTATTTGCTACAATATGCAGAAAAGCGTCCA AATGAAGCATTGCTATCGATCAACTATTTTCAAAAGGACTTGGGGGATCCAAATCCATTG GTTAGGGCTTGGGCTCTTCGTACAATGGCTGGGATTCGCTTACATGTTATTGCACCTCTT GCACTTGCAGCTGTGAGTAAATGTGCTAGAGATCCAGCTGTTTATGTTCGGAGATGTGCT GCAAACGCTCTTCCGAAGTTGCATGATTTGCGGCTGGAAGAACATGCTTCTGCGATTGAA GAGCTAGTTGGGATACTGTTGAATGACCATTCTCCAGGAGTAGTTGGAGCTGCGGCAGCG GCATTCACCTCTATCTGTCCAAATAACTTCAAACTGATTGGGAAGAACTATAAGAAGTTG TGCCAGATTCTCCCTGACGTTGAAGAGTGGGGTCAGATATTACTCATAGGAACTCTTTTG CGCTATGTGGTTGCTAGGCATGGACTTGTACGGGAATCTTTGATGTTGTCCATACATGGT ACGAATAGTAATGGCTTCTGTGAGAAGGATGGCCTAGGCAGAGATCTTACATTGGATAAA GAAGATGGTGGTAAAAGTGATTCATTTGATGTTAATCTGGTCAGTCTTGTATCTAAATGT TACATTCAAGGTCCAGATGAGTATCTATCAAGATCCAGTTGCACCGATACAGTGTCATCT GCTTTCGATACCAAAGAGACCACATCTATTGCACATAATGAAGATGTTAAGATCCTGCTT CAGTGTACATCTCCATTGTTATGGAGTAATAACAGTGCGGTTGTACTAGCAGCAGCTGGC GTTCAATGGATAATGGCGCCTCTGGAAGATGTTAAGAAAATTGTTAAACCGCTCTTGTTT TTGCTTAGGTCATCTAGCGCCTCCAAATATGTGGTCCTCTGCAATATCCTAGTTTTTGCC AAAGCAGTCCCTTCTCTCTTTGCTCCACACTTCGAAAATTTCTTTATTTGTTCCTCAGAT GCATATCAAGTGAAAGCATACAAGCTGGAAATGCTTTCTCTCATTGCTACCACTTCATCT ATCGCTTCAATTTTGAGAGAGTTTGAGGATTATATTAAAGATCCAGACAGGAGATTTGCG GCTGATACAGTTGCAGCAATTGGTTTGTGCGCAAAAAGACTGATGACAATTCCAACTACA TGTCTTGATGGATTGTTAGCACTAGTTCGACAGGAATCTTTTGCTGGCGATTTTGAGTCC GCGGATGGAGAAGCTGGAGTATTGGTGCAAGCCGTGATGTCAATTCAGACTATGATAGAG CGAGACCCCCTTCGTCATGAGAAAGTGTTAATTCAGCTGTTTCGTAGTCTGGATTCAATC AAGGTAGCTGCTGCTCGTGCAACTATTATTTGGATGGTGGGGGTCTACTGCTCTTTGGGT CATATCATTCCTAGGATGCTGACCACAATAACCAAGTACCTTGCATGGAGCTTTAAATCA GAGGCATCAGAGACAAAACTACAGATTCTTAATACTATTGCTAAGGTTCTAATAAGTGCA GAGGCTGGTGACTTTCATATGTTGAAAAGGATTGTGGTCTATGTGTTTGAATTGGGCGAA TATGACTTAAGCTATGATATTCGTGATCGAACTCGTTTCCTGAAGAAACTGCTGTCATGC AAATTAGCTAGTCATGAGCCGGCAGAAGACAGTGTTGCATCACAAGAAAATATTGCTGCG CATGTTGTGGAACATGTCTTTGGAAGAAAACTGAAATCTGTTTCACCTATAACCCTGCAC AATCGTTTTTATCTTCCTGGATCTCTGTCACAGATAGTTCTTCATGCAGCCCCTGGATAT GAACCTCTTCCAAAGCCCTGCAGTTTTGTGTATGAAGAACAGGACCAGCTGTCAGATTTA GATAAACAAAGAGAGGCCGCAGCTGATTTAGATGGTTCTGAGGAATCCTCTGAAACAGGG GATGAGAATGGCTCCTCTGATTATGACTCTGAATCTTCTAATGGTTCGGATTTTAGCAGT GAAGGTGATGAAAGAACAGTGTCTAATGACGCCAATGACCCAGCTGCTCCTTTAATTCAA ATTTCAGAGACTTCTGTTTCCGCTGACCAGGAAGAACTAAGGTCCAGAAGGGCCCTGGAT TTGTGGTTAGATGATCAGCCTAGTACATCAAACCAAACTCCATCTGCATTAAATAGTAAT CAGAGCTCTTATGCGAAGATATCCATTGGTGATGTAGGAAGCCGAGTTAAGCCTAAAAGC TATAGTCTCGTAGACCCTGGAAATGGCAGTGGCTTGAAGGTAGACTATGCCTTTTTATCT GAAGTCTCTAATGTATCTCCATTACATGTTTGCGTAGAAGTTCTGTTTGAGAACAGTTCT GCTGAACCTATCCTGGAGGTGAATTTGGAAGATGAAGAATCAATGAAGGTAGCAGACTCT TCTGAACAGACATTGGTTGGTAAAGCAAATGCATCTTACAACAATATACCAACCCTAATT CCAATGGAGGAAATTAGCTGCCTTGAACCACATCAGAGCACAAAGAGGCTTATCCAGGTT CGGTTTCATCACCACCTGCTTCCCATGAGGTTAACCTTACATTACAATGAAAAGAAAGTT CCTGTCAAGTTACGACCTGATCTTGGATACCTTGTGAAACCATTTTCAATGAGCATCGAG GAATTCTTAGCTACAGAATCTCGATTACCTGGAATGTTTGAGTATAGTCGAAGGTGTACT TTTGACGATCATGTTAAAGATTCAAGAACGGAGAATGGGAAAGACAAATTTCTTAGCATC TGCGAGAGTATAACACTAAAGGTGCTTAGCAACTCAAATCTACACCTTGTATCTGTGGAT TTACCAGTTGCAAACTCACTCGAAGATGCAACTGGTCTGCGATTAAGATTCAGCAGCAAA ATCTTGAGCAGTGAGATCCCTCTTTTGATTACCATCACAGTCGAAGGCAAATGCACCGAA GTTCTGAATTTAACAGTCAAGATCAATTGCGAAGAAACGGTTTTTGGTTTAAACCTGTTG AACAGGATAGCTAATTTCATGGTTGAGCCGTCTTCTTCAGCCACTTGA

Peptide Sequence

PEP ID	AT3G55480.2
PEP Infomation	\| protein affected traf%26#64257%3Bcking 2 \| Chr3:20566372-20571171 REVERSE LENGTH=1115 \| 201606
Sequence	MFNKFGSTSETLSKASAGLLRIGTDAHLYDDPEDVNIAPLLDSKFESEKCEALKRLLALI AQGFDVSNFFPQVVKNVASQSSEVKKLVYLYLLQYAEKRPNEALLSINYFQKDLGDPNPL VRAWALRTMAGIRLHVIAPLALAAVSKCARDPAVYVRRCAANALPKLHDLRLEEHASAIE ELVGILLNDHSPGVVGAAAAAFTSICPNNFKLIGKNYKKLCQILPDVEEWGQILLIGTLL RYVVARHGLVRESLMLSIHGTNSNGFCEKDGLGRDLTLDKEDGGKSDSFDVNLVSLVSKC YIQGPDEYLSRSSCTDTVSSAFDTKETTSIAHNEDVKILLQCTSPLLWSNNSAVVLAAAG VQWIMAPLEDVKKIVKPLLFLLRSSSASKYVVLCNILVFAKAVPSLFAPHFENFFICSSD AYQVKAYKLEMLSLIATTSSIASILREFEDYIKDPDRRFAADTVAAIGLCAKRLMTIPTT CLDGLLALVRQESFAGDFESADGEAGVLVQAVMSIQTMIERDPLRHEKVLIQLFRSLDSI KVAAARATIIWMVGVYCSLGHIIPRMLTTITKYLAWSFKSEASETKLQILNTIAKVLISA EAGDFHMLKRIVVYVFELGEYDLSYDIRDRTRFLKKLLSCKLASHEPAEDSVASQENIAA HVVEHVFGRKLKSVSPITLHNRFYLPGSLSQIVLHAAPGYEPLPKPCSFVYEEQDQLSDL DKQREAAADLDGSEESSETGDENGSSDYDSESSNGSDFSSEGDERTVSNDANDPAAPLIQ ISETSVSADQEELRSRRALDLWLDDQPSTSNQTPSALNSNQSSYAKISIGDVGSRVKPKS YSLVDPGNGSGLKVDYAFLSEVSNVSPLHVCVEVLFENSSAEPILEVNLEDEESMKVADS SEQTLVGKANASYNNIPTLIPMEEISCLEPHQSTKRLIQVRFHHHLLPMRLTLHYNEKKV PVKLRPDLGYLVKPFSMSIEEFLATESRLPGMFEYSRRCTFDDHVKDSRTENGKDKFLSI CESITLKVLSNSNLHLVSVDLPVANSLEDATGLRLRFSSKILSSEIPLLITITVEGKCTE VLNLTVKINCEETVFGLNLLNRIANFMVEPSSSAT

Transcript Sequence

Transcript ID	AT3G55480.2
Transcript Infomation	\| protein affected traf%26#64257%3Bcking 2 \| Chr3:20566248-20571248 REVERSE LENGTH=3549 \| 201606
Sequence	AAAAGTTCGTCTCATCGTCTCTGTCTCTCTTACACAGCTCTCTGAATTTCGGAATCGGAT TTGATCGGAAAGTTGGAATGTTCAATAAGTTTGGTTCGACGTCGGAGACTCTTAGCAAAG CTTCAGCTGGGTTGCTTCGGATCGGCACTGACGCTCATCTTTATGATGATCCGGAAGACG TCAACATTGCTCCACTTCTCGATAGCAAGTTCGAATCTGAGAAATGTGAAGCTCTTAAGC GTCTCCTTGCTCTTATCGCTCAAGGCTTTGATGTCTCCAATTTCTTTCCTCAGGTGGTGA AGAATGTGGCGTCACAGTCATCGGAAGTGAAGAAGCTTGTTTACTTGTATTTGCTACAAT ATGCAGAAAAGCGTCCAAATGAAGCATTGCTATCGATCAACTATTTTCAAAAGGACTTGG GGGATCCAAATCCATTGGTTAGGGCTTGGGCTCTTCGTACAATGGCTGGGATTCGCTTAC ATGTTATTGCACCTCTTGCACTTGCAGCTGTGAGTAAATGTGCTAGAGATCCAGCTGTTT ATGTTCGGAGATGTGCTGCAAACGCTCTTCCGAAGTTGCATGATTTGCGGCTGGAAGAAC ATGCTTCTGCGATTGAAGAGCTAGTTGGGATACTGTTGAATGACCATTCTCCAGGAGTAG TTGGAGCTGCGGCAGCGGCATTCACCTCTATCTGTCCAAATAACTTCAAACTGATTGGGA AGAACTATAAGAAGTTGTGCCAGATTCTCCCTGACGTTGAAGAGTGGGGTCAGATATTAC TCATAGGAACTCTTTTGCGCTATGTGGTTGCTAGGCATGGACTTGTACGGGAATCTTTGA TGTTGTCCATACATGGTACGAATAGTAATGGCTTCTGTGAGAAGGATGGCCTAGGCAGAG ATCTTACATTGGATAAAGAAGATGGTGGTAAAAGTGATTCATTTGATGTTAATCTGGTCA GTCTTGTATCTAAATGTTACATTCAAGGTCCAGATGAGTATCTATCAAGATCCAGTTGCA CCGATACAGTGTCATCTGCTTTCGATACCAAAGAGACCACATCTATTGCACATAATGAAG ATGTTAAGATCCTGCTTCAGTGTACATCTCCATTGTTATGGAGTAATAACAGTGCGGTTG TACTAGCAGCAGCTGGCGTTCAATGGATAATGGCGCCTCTGGAAGATGTTAAGAAAATTG TTAAACCGCTCTTGTTTTTGCTTAGGTCATCTAGCGCCTCCAAATATGTGGTCCTCTGCA ATATCCTAGTTTTTGCCAAAGCAGTCCCTTCTCTCTTTGCTCCACACTTCGAAAATTTCT TTATTTGTTCCTCAGATGCATATCAAGTGAAAGCATACAAGCTGGAAATGCTTTCTCTCA TTGCTACCACTTCATCTATCGCTTCAATTTTGAGAGAGTTTGAGGATTATATTAAAGATC CAGACAGGAGATTTGCGGCTGATACAGTTGCAGCAATTGGTTTGTGCGCAAAAAGACTGA TGACAATTCCAACTACATGTCTTGATGGATTGTTAGCACTAGTTCGACAGGAATCTTTTG CTGGCGATTTTGAGTCCGCGGATGGAGAAGCTGGAGTATTGGTGCAAGCCGTGATGTCAA TTCAGACTATGATAGAGCGAGACCCCCTTCGTCATGAGAAAGTGTTAATTCAGCTGTTTC GTAGTCTGGATTCAATCAAGGTAGCTGCTGCTCGTGCAACTATTATTTGGATGGTGGGGG TCTACTGCTCTTTGGGTCATATCATTCCTAGGATGCTGACCACAATAACCAAGTACCTTG CATGGAGCTTTAAATCAGAGGCATCAGAGACAAAACTACAGATTCTTAATACTATTGCTA AGGTTCTAATAAGTGCAGAGGCTGGTGACTTTCATATGTTGAAAAGGATTGTGGTCTATG TGTTTGAATTGGGCGAATATGACTTAAGCTATGATATTCGTGATCGAACTCGTTTCCTGA AGAAACTGCTGTCATGCAAATTAGCTAGTCATGAGCCGGCAGAAGACAGTGTTGCATCAC AAGAAAATATTGCTGCGCATGTTGTGGAACATGTCTTTGGAAGAAAACTGAAATCTGTTT CACCTATAACCCTGCACAATCGTTTTTATCTTCCTGGATCTCTGTCACAGATAGTTCTTC ATGCAGCCCCTGGATATGAACCTCTTCCAAAGCCCTGCAGTTTTGTGTATGAAGAACAGG ACCAGCTGTCAGATTTAGATAAACAAAGAGAGGCCGCAGCTGATTTAGATGGTTCTGAGG AATCCTCTGAAACAGGGGATGAGAATGGCTCCTCTGATTATGACTCTGAATCTTCTAATG GTTCGGATTTTAGCAGTGAAGGTGATGAAAGAACAGTGTCTAATGACGCCAATGACCCAG CTGCTCCTTTAATTCAAATTTCAGAGACTTCTGTTTCCGCTGACCAGGAAGAACTAAGGT CCAGAAGGGCCCTGGATTTGTGGTTAGATGATCAGCCTAGTACATCAAACCAAACTCCAT CTGCATTAAATAGTAATCAGAGCTCTTATGCGAAGATATCCATTGGTGATGTAGGAAGCC GAGTTAAGCCTAAAAGCTATAGTCTCGTAGACCCTGGAAATGGCAGTGGCTTGAAGGTAG ACTATGCCTTTTTATCTGAAGTCTCTAATGTATCTCCATTACATGTTTGCGTAGAAGTTC TGTTTGAGAACAGTTCTGCTGAACCTATCCTGGAGGTGAATTTGGAAGATGAAGAATCAA TGAAGGTAGCAGACTCTTCTGAACAGACATTGGTTGGTAAAGCAAATGCATCTTACAACA ATATACCAACCCTAATTCCAATGGAGGAAATTAGCTGCCTTGAACCACATCAGAGCACAA AGAGGCTTATCCAGGTTCGGTTTCATCACCACCTGCTTCCCATGAGGTTAACCTTACATT ACAATGAAAAGAAAGTTCCTGTCAAGTTACGACCTGATCTTGGATACCTTGTGAAACCAT TTTCAATGAGCATCGAGGAATTCTTAGCTACAGAATCTCGATTACCTGGAATGTTTGAGT ATAGTCGAAGGTGTACTTTTGACGATCATGTTAAAGATTCAAGAACGGAGAATGGGAAAG ACAAATTTCTTAGCATCTGCGAGAGTATAACACTAAAGGTGCTTAGCAACTCAAATCTAC ACCTTGTATCTGTGGATTTACCAGTTGCAAACTCACTCGAAGATGCAACTGGTCTGCGAT TAAGATTCAGCAGCAAAATCTTGAGCAGTGAGATCCCTCTTTTGATTACCATCACAGTCG AAGGCAAATGCACCGAAGTTCTGAATTTAACAGTCAAGATCAATTGCGAAGAAACGGTTT TTGGTTTAAACCTGTTGAACAGGATAGCTAATTTCATGGTTGAGCCGTCTTCTTCAGCCA CTTGATCATCAAAACTGAGGATCTTTTTTTTGTCACCTTGTGAAAATGTTACCAATCCTT TTTTTTATAACATTATTTTGATACATTTATGTAAAATATAAATTATAAATACAATGAGAT TTCAATTTC