Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G55340.1
CDS Infomation	\| phragmoplastin interacting protein 1 \| Chr3:20515672-20517832 FORWARD LENGTH=1794 \| 201606
Sequence	ATGGTGCTGTCGAACAAGAAGCTGAAGCAGAGGATTCGACAAGATTTGGCTGAATCACTA TCTGTCTCTGTATCCGAAACAAATCCACAATCTCAGTCTCTGAAATTGCTCCTTGATTCA TCTAGCCACAAACCCAGATTGTCGAAGAGAGAGAAACGAAGAAATTGCGAAACTTTCGCT AGAGAAGACGACGAAATCAGAGAGAATGAAGTTGGGAATGGTGGGTCAAGCGAGAAGACT GATACGAAGATTAAAAAGAAGAGAAAGAGAGACGATGCTGTGGAAGTCGACGAGTTAGAA GGAGATGAAGGAACTAAGGAAGAGCAAAAACCCCAGAAGAAGAAAAATAAGAAGAAGAAG AAGAAGAGAAAGGTAAACAAAACGCCAAAGAAGGCTGAGGAAGGCAATGTAGAAGAGAAG GTGAAGGTAGAAGAGATTGAAGTTAATACAGACAATAAAGAAGAAGATGGGGTTGTTCCT AACAAGTTATATGTTGGGGGTATTCCTTATCAGAGTACAGAAGATGAGATTCGTAGCTAC TTTAGAAGCTGTGGAGTCATCATTAAAGTTGATTGCAAGATGCGTCCTGAAGATGGGGCT TTCAGTGGTATTGCCTTCATCACTTTTGACACTGAAGATGGCGCAAAACGTGCTTTGGCT TTTGATAGAGCTGCTATGGGTGATCGATATTTGACAATCCAGCAATACGTGAAAACCACC ACCCCTTCCATTCCAAGAAGGAAAACATCTTCTGGTTTCGCTCCAGAAATGGTGGATGGC TATAACAGGGTATACATTGGGAATTTAGCCTGGGACACAACAGAGCGTGACATACGGAAG CTCTTCTCTGACTGCGTAATAAACTCTGTGCGGTTGGGTAAAAACAAAGAAACAGGAGAG TTTAAAGGGTATGCGCATGTGGATTTCAAGGATAGTGTGTCTGTGGCGATTGCGCTGAAG CTGGATCAGCAGGTTATTTGCGGAAGACCTGTCAAGATATGTTGTGCACTTAAAGACAGA CCAGCTACTGATCATACACCTGGTGAAACGAACAATGCTGGTTCGTACAACATGGAAGAT ACTTATGCTGCTGCTGATCCAGTACCGGCTTTAGCTGGGCGTAGCGAAGTTGATGACGGA AACTACTTTGCAACTACGGTTAGCAGCAGTAAGGTCAAAAGGAGGGTCTGTTATGAGTGT GGAGAAAAGGGTCATCTTTCTACAGCCTGTCCCATAAAGCTTCAAAAGGCTGATGATCAG GCAAACTCAAAGCTGGGTCAAGAGACTGTTGATGGTAGACCGGCTATGCAAAGCTATGGT CTTCCAAAGAATAGTGGTGATTCTTACTACATGAATGAGACATACGCTTCTACAAATGAA ACTTATAATGGAGGATACTCAGCATCTGCTGTTGGCACTGGTAAGGTCAAAAGGAGGAAC TGTTATGAGTGTGGAGAAAAGGGTCATCTTTCTACAGCCTGTCCCATAAAGCTTCAAAAC ACTTCTCACACAAACTCAACGCTGGATCACCAAACTGTTGAGGCAGGACCGACTCAGGTA ACAAGCTATAGTCTTCAAAAGAAAACAAGAGACACTGAAAACAATGGTGGTTCGTTCATG GATGAGAGCTATGCTACTGTTCCGATATCCATTGATGTGACAAATGGAGCTAATGATGCA AGCTTAACATCTGCGGTTAGCACTGGTAAGATCAAAAAGAGAAACTGTTACGAGTGCGGA GAAAAAGGTCATCTTTCTTCAGCTTGCCCTAACAAGCTGCAAAAACAAGGCTGA

Peptide Sequence

PEP ID	AT3G55340.1
PEP Infomation	\| phragmoplastin interacting protein 1 \| Chr3:20515672-20517832 FORWARD LENGTH=597 \| 201606
Sequence	MVLSNKKLKQRIRQDLAESLSVSVSETNPQSQSLKLLLDSSSHKPRLSKREKRRNCETFA REDDEIRENEVGNGGSSEKTDTKIKKKRKRDDAVEVDELEGDEGTKEEQKPQKKKNKKKK KKRKVNKTPKKAEEGNVEEKVKVEEIEVNTDNKEEDGVVPNKLYVGGIPYQSTEDEIRSY FRSCGVIIKVDCKMRPEDGAFSGIAFITFDTEDGAKRALAFDRAAMGDRYLTIQQYVKTT TPSIPRRKTSSGFAPEMVDGYNRVYIGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGE FKGYAHVDFKDSVSVAIALKLDQQVICGRPVKICCALKDRPATDHTPGETNNAGSYNMED TYAAADPVPALAGRSEVDDGNYFATTVSSSKVKRRVCYECGEKGHLSTACPIKLQKADDQ ANSKLGQETVDGRPAMQSYGLPKNSGDSYYMNETYASTNETYNGGYSASAVGTGKVKRRN CYECGEKGHLSTACPIKLQNTSHTNSTLDHQTVEAGPTQVTSYSLQKKTRDTENNGGSFM DESYATVPISIDVTNGANDASLTSAVSTGKIKKRNCYECGEKGHLSSACPNKLQKQG

Transcript Sequence

Transcript ID	AT3G55340.1
Transcript Infomation	\| phragmoplastin interacting protein 1 \| Chr3:20515630-20518059 FORWARD LENGTH=2063 \| 201606
Sequence	AGGGTTTTATGTTTTTTGTTTTTGGCGGTCTCAGTGAAGAAGATGGTGCTGTCGAACAAG AAGCTGAAGCAGAGGATTCGACAAGATTTGGCTGAATCACTATCTGTCTCTGTATCCGAA ACAAATCCACAATCTCAGTCTCTGAAATTGCTCCTTGATTCATCTAGCCACAAACCCAGA TTGTCGAAGAGAGAGAAACGAAGAAATTGCGAAACTTTCGCTAGAGAAGACGACGAAATC AGAGAGAATGAAGTTGGGAATGGTGGGTCAAGCGAGAAGACTGATACGAAGATTAAAAAG AAGAGAAAGAGAGACGATGCTGTGGAAGTCGACGAGTTAGAAGGAGATGAAGGAACTAAG GAAGAGCAAAAACCCCAGAAGAAGAAAAATAAGAAGAAGAAGAAGAAGAGAAAGGTAAAC AAAACGCCAAAGAAGGCTGAGGAAGGCAATGTAGAAGAGAAGGTGAAGGTAGAAGAGATT GAAGTTAATACAGACAATAAAGAAGAAGATGGGGTTGTTCCTAACAAGTTATATGTTGGG GGTATTCCTTATCAGAGTACAGAAGATGAGATTCGTAGCTACTTTAGAAGCTGTGGAGTC ATCATTAAAGTTGATTGCAAGATGCGTCCTGAAGATGGGGCTTTCAGTGGTATTGCCTTC ATCACTTTTGACACTGAAGATGGCGCAAAACGTGCTTTGGCTTTTGATAGAGCTGCTATG GGTGATCGATATTTGACAATCCAGCAATACGTGAAAACCACCACCCCTTCCATTCCAAGA AGGAAAACATCTTCTGGTTTCGCTCCAGAAATGGTGGATGGCTATAACAGGGTATACATT GGGAATTTAGCCTGGGACACAACAGAGCGTGACATACGGAAGCTCTTCTCTGACTGCGTA ATAAACTCTGTGCGGTTGGGTAAAAACAAAGAAACAGGAGAGTTTAAAGGGTATGCGCAT GTGGATTTCAAGGATAGTGTGTCTGTGGCGATTGCGCTGAAGCTGGATCAGCAGGTTATT TGCGGAAGACCTGTCAAGATATGTTGTGCACTTAAAGACAGACCAGCTACTGATCATACA CCTGGTGAAACGAACAATGCTGGTTCGTACAACATGGAAGATACTTATGCTGCTGCTGAT CCAGTACCGGCTTTAGCTGGGCGTAGCGAAGTTGATGACGGAAACTACTTTGCAACTACG GTTAGCAGCAGTAAGGTCAAAAGGAGGGTCTGTTATGAGTGTGGAGAAAAGGGTCATCTT TCTACAGCCTGTCCCATAAAGCTTCAAAAGGCTGATGATCAGGCAAACTCAAAGCTGGGT CAAGAGACTGTTGATGGTAGACCGGCTATGCAAAGCTATGGTCTTCCAAAGAATAGTGGT GATTCTTACTACATGAATGAGACATACGCTTCTACAAATGAAACTTATAATGGAGGATAC TCAGCATCTGCTGTTGGCACTGGTAAGGTCAAAAGGAGGAACTGTTATGAGTGTGGAGAA AAGGGTCATCTTTCTACAGCCTGTCCCATAAAGCTTCAAAACACTTCTCACACAAACTCA ACGCTGGATCACCAAACTGTTGAGGCAGGACCGACTCAGGTAACAAGCTATAGTCTTCAA AAGAAAACAAGAGACACTGAAAACAATGGTGGTTCGTTCATGGATGAGAGCTATGCTACT GTTCCGATATCCATTGATGTGACAAATGGAGCTAATGATGCAAGCTTAACATCTGCGGTT AGCACTGGTAAGATCAAAAAGAGAAACTGTTACGAGTGCGGAGAAAAAGGTCATCTTTCT TCAGCTTGCCCTAACAAGCTGCAAAAACAAGGCTGATGATCCCACAAGCTCTACAAAGAC AGCTTATACATTTTGTTCTTAAACTTTACATTTGAATCATTGGAGGAATATGGAAGGACG TGGACCACTTGGTAGAAGAGTGGAGTTTTGGTCCTCTTTTAGAAAACCATAAATTTTATT CTGTATTGTTTTATGATCTTTCATAGAATGCTCTAAAGTCTAAAAACCAAAAGTATCTTA ATATATTGGATTATTATTTCTTG