Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G55220.1
CDS Infomation	\| Cleavage and polyadenylation specificity factor (CPSF) A subunit protein \| Chr3:20467116-20470944 REVERSE LENGTH=3645 \| 201606
Sequence	ATGTATCTGTACAGTCTTACTCTGCAGCAGGCGACCGGAATCGTCTGCGCAATCAACGGG AACTTCTCCGGCGGGAAGACACAGGAGATTGCGGTAGCTCGTGGCAAGATTTTGGATCTT CTCCGTCCCGACGAGAACGGTAAGATCCAGACGATACACTCTGTAGAAGTATTTGGTGCA ATTAGATCCCTAGCTCAGTTTAGGTTGACTGGTGCGCAGAAGGATTATATCGTAGTAGGC TCAGATTCGGGTAGGATTGTTATACTTGAGTACAACAAGGAGAAGAATGTGTTCGATAAA GTTCACCAGGAGACTTTTGGCAAGTCTGGTTGCAGAAGAATTGTGCCAGGCCAGTACGTG GCTGTTGATCCCAAAGGAAGAGCTGTTATGATTGGAGCTTGTGAGAAGCAGAAATTGGTT TATGTTTTGAACAGAGATACCACTGCTAGGTTAACTATTTCTTCTCCCTTGGAGGCTCAC AAGTCTCATACCATTTGCTATTCTCTCTGCGGTGTGGACTGCGGTTTCGATAACCCGATT TTTGCAGCCATTGAGCTTGATTACTCCGAGGCAGATCAGGATCCTACTGGCCAAGCCGCT AGTGAGGCTCAGAAGCATTTGACTTTCTATGAGCTCGATTTGGGGCTCAACCATGTCTCT AGAAAGTGGTCTAACCCTGTTGACAATGGTGCCAATATGCTTGTTACTGTTCCTGGAGGA GCTGATGGCCCGAGTGGAGTTTTGGTTTGCGCCGAGAATTTTGTTATTTACATGAATCAG GGTCATCCAGACGTGAGGGCTGTGATTCCTAGACGAACTGATTTGCCTGCTGAACGGGGA GTTTTGGTTGTTTCTGCCGCCGTGCACAAGCAGAAGACAATGTTCTTCTTTTTAATCCAG ACTGAGTATGGCGACGTTTTTAAGGTCACCTTGGATCACAATGGCGATCATGTCTCCGAG TTGAAGGTTAAATACTTCGACACCATTCCCGTCGCATCCTCTATATGTGTGTTGAAGCTG GGATTCCTCTTCTCTGCTTCGGAATTTGGAAACCATGGTTTGTATCAGTTTCAGGCCATA GGAGAGGAACCTGATGTAGAGTCTTCCTCCTCTAATCTGATGGAAACCGAAGAAGGTTTT CAGCCCGTCTTTTTTCAGCCTAGACGACTTAAGAATCTTGTTAGGATTGACCAAGTCGAG AGTCTGATGCCGCTCATGGACATGAAAGTCCTAAACATTTTTGAGGAAGAAACCCCTCAA ATCTTTTCACTTTGCGGCCGGGGTCCACGATCCTCTCTAAGGATACTGAGACCTGGTTTG GCCATCACTGAGATGGCTGTCTCTCAGCTTCCAGGTCAGCCAAGTGCTGTGTGGACGGTG AAAAAGAATGTGAGCGATGAGTTTGATGCATACATCGTTGTCTCTTTTACCAATGCTACT CTTGTTCTTTCGATTGGTGAACAAGTTGAAGAAGTTAATGACAGTGGGTTTCTTGATACT ACCCCATCCCTGGCTGTCTCTCTGATCGGCGATGATTCTCTCATGCAAGTCCATCCCAAT GGTATCCGCCACATAAGGGAAGATGGACGCATTAACGAATGGAGAACTCCTGGCAAGAGG TCAATTGTTAAAGTTGGGTATAATCGGCTTCAAGTGGTCATTGCATTGAGCGGGGGAGAG CTTATATACTTTGAGGCAGATATGACTGGCCAGCTGATGGAGGTGGAGAAGCATGAAATG TCTGGTGATGTGGCTTGCCTGGACATTGCCCCTGTTCCTGAAGGAAGAAAAAGGTCTCGC TTTCTTGCTGTGGGATCTTATGATAATACTGTGCGCATTCTATCTCTGGATCCTGACGAC TGTCTGCAGATTCTCAGCGTGCAAAGTGTCTCTTCAGCTCCGGAGTCTCTGCTATTCCTC GAAGTTCAGGCATCGATTGGTGGAGATGATGGTGCTGATCACCCGGCAAATCTCTTCCTC AATTCTGGGCTGCAGAATGGTGTTCTTTTCAGAACTGTGGTGGACATGGTGACTGGTCAG CTTTCGGATTCTCGCTCCCGGTTCTTGGGGCTGAAGCCTCCCAAGCTATTCTCCATTTCT GTGAGAGGCCGGTCTGCAATGCTGTGTTTGTCTAGCCGACCTTGGCTTGGTTATATTCAC CGGGGACACTTCCATTTGACGCCTCTGTCTTACGAGACTCTGGAATTTGCTGCCCCCTTT TCATCTGATCAGTGCGCTGAAGGTGTTGTCTCTGTCGCTGGGGATGCTCTGAGAATTTTT ATGATTGATCGTCTTGGTGAAACATTCAACGAAACAGTGGTCCCTCTGAGGTACACGCCT AGAAAGTTTGTTCTCCATCCCAAGCGGAAGTTGTTGGTTATTATCGAGAGTGACCAGGGA GCATTCACCGCAGAAGAGCGTGAAGCTGCAAGAAAGGAGTGCTTCGAGGCTGGTGGAGTG GGAGAAAATGGCAATGGCAATGCAGATCAGATGGAGAATGGTGCGGATGATGAAGATAAG GAAGACCCGCTTTCTGATGAGCAGTACGGTTATCCAAAAGCAGAGTCTGAAAAGTGGGTC TCTTGCATCAGAGTTCTTGATCCCAAGACAGCTACGACAACTTGTCTCCTGGAACTTCAG GACAACGAAGCTGCATACAGTGTCTGTACGGTGAATTTCCATGATAAAGAGTATGGTACA CTGTTGGCTGTTGGTACGGTCAAAGGGATGCAGTTCTGGCCCAAGAAGAATCTAGTGGCT GGGTTCATACATATTTATAGGTTTGTGGAGGATGGGAAATCTCTTGAGCTTCTTCATAAG ACGCAAGTAGAAGGTGTTCCTCTTGCTCTGTGCCAGTTCCAAGGAAGACTGCTGGCAGGG ATCGGACCTGTCCTCAGATTGTATGATTTGGGGAAAAAGAGACTGCTTAGGAAATGTGAA AACAAGCTCTTTCCAAACACCATTATCTCTATCCAAACTTACCGTGACCGTATATACGTT GGTGACATTCAGGAGTCTTTCCATTACTGCAAGTACAGGCGCGACGAGAATCAGCTGTAC ATATTTGCGGATGACTGCGTGCCGAGGTGGCTGACAGCATCGCACCATGTGGATTTCGAT ACCATGGCAGGTGCAGATAAGTTTGGGAATGTGTATTTTGTGCGGTTGCCTCAGGATCTG TCGGAGGAGATAGAAGAAGACCCGACTGGCGGGAAGATCAAGTGGGAGCAAGGAAAGCTG AATGGAGCACCGAACAAAGTGGATGAGATAGTACAGTTCCATGTTGGGGACGTTGTGACG TGCTTGCAGAAAGCTTCGATGATCCCAGGTGGATCGGAATCGATAATGTATGGAACAGTG ATGGGTAGCATAGGGGCATTACATGCTTTCACATCCCGTGATGATGTGGATTTCTTCTCT CATCTGGAGATGCACATGAGGCAGGAGTATCCTCCTCTCTGCGGGAGAGACCACATGGCT TACAGATCTGCATATTTTCCGGTCAAGGACGTGATAGATGGAGATCTGTGTGAGCAGTTC CCGACACTCCCAATGGACTTGCAGAGGAAAATAGCAGACGAGCTGGATAGAACACCTGCG GAGATTCTGAAGAAGCTCGAAGACGCAAGGAACAAGATCATTTGA

Peptide Sequence

PEP ID	AT3G55220.1
PEP Infomation	\| Cleavage and polyadenylation specificity factor (CPSF) A subunit protein \| Chr3:20467116-20470944 REVERSE LENGTH=1214 \| 201606
Sequence	MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGA IRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYV AVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPI FAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGG ADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQ TEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAI GEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQ IFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNAT LVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR SIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSR FLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFL NSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIH RGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTP RKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDK EDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGT LLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAG IGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLY IFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKL NGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFS HLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPA EILKKLEDARNKII

Transcript Sequence

Transcript ID	AT3G55220.1
Transcript Infomation	\| Cleavage and polyadenylation specificity factor (CPSF) A subunit protein \| Chr3:20466676-20471171 REVERSE LENGTH=4312 \| 201606
Sequence	TAGCAGAGGAACACCACTTCCGTCGTAGAGCTTTGGAGCTATGGCGGTAATTCATTATAT AGGGTTTATTCTTTCCGTTCCTCACCAAAATCTGCCAAATCCGAAGTTGCAGATGCGCTA GGAGTTCACTTAAACTCGGAGCCAAAACCATCCTCAAGTCCTTCCAGTTTCGGGGATTCT CCTAAATCCTAGCCGTTGCTGGTGGTTGTAGCTTGCTAGTTTGAGAGATGTATCTGTACA GTCTTACTCTGCAGCAGGCGACCGGAATCGTCTGCGCAATCAACGGGAACTTCTCCGGCG GGAAGACACAGGAGATTGCGGTAGCTCGTGGCAAGATTTTGGATCTTCTCCGTCCCGACG AGAACGGTAAGATCCAGACGATACACTCTGTAGAAGTATTTGGTGCAATTAGATCCCTAG CTCAGTTTAGGTTGACTGGTGCGCAGAAGGATTATATCGTAGTAGGCTCAGATTCGGGTA GGATTGTTATACTTGAGTACAACAAGGAGAAGAATGTGTTCGATAAAGTTCACCAGGAGA CTTTTGGCAAGTCTGGTTGCAGAAGAATTGTGCCAGGCCAGTACGTGGCTGTTGATCCCA AAGGAAGAGCTGTTATGATTGGAGCTTGTGAGAAGCAGAAATTGGTTTATGTTTTGAACA GAGATACCACTGCTAGGTTAACTATTTCTTCTCCCTTGGAGGCTCACAAGTCTCATACCA TTTGCTATTCTCTCTGCGGTGTGGACTGCGGTTTCGATAACCCGATTTTTGCAGCCATTG AGCTTGATTACTCCGAGGCAGATCAGGATCCTACTGGCCAAGCCGCTAGTGAGGCTCAGA AGCATTTGACTTTCTATGAGCTCGATTTGGGGCTCAACCATGTCTCTAGAAAGTGGTCTA ACCCTGTTGACAATGGTGCCAATATGCTTGTTACTGTTCCTGGAGGAGCTGATGGCCCGA GTGGAGTTTTGGTTTGCGCCGAGAATTTTGTTATTTACATGAATCAGGGTCATCCAGACG TGAGGGCTGTGATTCCTAGACGAACTGATTTGCCTGCTGAACGGGGAGTTTTGGTTGTTT CTGCCGCCGTGCACAAGCAGAAGACAATGTTCTTCTTTTTAATCCAGACTGAGTATGGCG ACGTTTTTAAGGTCACCTTGGATCACAATGGCGATCATGTCTCCGAGTTGAAGGTTAAAT ACTTCGACACCATTCCCGTCGCATCCTCTATATGTGTGTTGAAGCTGGGATTCCTCTTCT CTGCTTCGGAATTTGGAAACCATGGTTTGTATCAGTTTCAGGCCATAGGAGAGGAACCTG ATGTAGAGTCTTCCTCCTCTAATCTGATGGAAACCGAAGAAGGTTTTCAGCCCGTCTTTT TTCAGCCTAGACGACTTAAGAATCTTGTTAGGATTGACCAAGTCGAGAGTCTGATGCCGC TCATGGACATGAAAGTCCTAAACATTTTTGAGGAAGAAACCCCTCAAATCTTTTCACTTT GCGGCCGGGGTCCACGATCCTCTCTAAGGATACTGAGACCTGGTTTGGCCATCACTGAGA TGGCTGTCTCTCAGCTTCCAGGTCAGCCAAGTGCTGTGTGGACGGTGAAAAAGAATGTGA GCGATGAGTTTGATGCATACATCGTTGTCTCTTTTACCAATGCTACTCTTGTTCTTTCGA TTGGTGAACAAGTTGAAGAAGTTAATGACAGTGGGTTTCTTGATACTACCCCATCCCTGG CTGTCTCTCTGATCGGCGATGATTCTCTCATGCAAGTCCATCCCAATGGTATCCGCCACA TAAGGGAAGATGGACGCATTAACGAATGGAGAACTCCTGGCAAGAGGTCAATTGTTAAAG TTGGGTATAATCGGCTTCAAGTGGTCATTGCATTGAGCGGGGGAGAGCTTATATACTTTG AGGCAGATATGACTGGCCAGCTGATGGAGGTGGAGAAGCATGAAATGTCTGGTGATGTGG CTTGCCTGGACATTGCCCCTGTTCCTGAAGGAAGAAAAAGGTCTCGCTTTCTTGCTGTGG GATCTTATGATAATACTGTGCGCATTCTATCTCTGGATCCTGACGACTGTCTGCAGATTC TCAGCGTGCAAAGTGTCTCTTCAGCTCCGGAGTCTCTGCTATTCCTCGAAGTTCAGGCAT CGATTGGTGGAGATGATGGTGCTGATCACCCGGCAAATCTCTTCCTCAATTCTGGGCTGC AGAATGGTGTTCTTTTCAGAACTGTGGTGGACATGGTGACTGGTCAGCTTTCGGATTCTC GCTCCCGGTTCTTGGGGCTGAAGCCTCCCAAGCTATTCTCCATTTCTGTGAGAGGCCGGT CTGCAATGCTGTGTTTGTCTAGCCGACCTTGGCTTGGTTATATTCACCGGGGACACTTCC ATTTGACGCCTCTGTCTTACGAGACTCTGGAATTTGCTGCCCCCTTTTCATCTGATCAGT GCGCTGAAGGTGTTGTCTCTGTCGCTGGGGATGCTCTGAGAATTTTTATGATTGATCGTC TTGGTGAAACATTCAACGAAACAGTGGTCCCTCTGAGGTACACGCCTAGAAAGTTTGTTC TCCATCCCAAGCGGAAGTTGTTGGTTATTATCGAGAGTGACCAGGGAGCATTCACCGCAG AAGAGCGTGAAGCTGCAAGAAAGGAGTGCTTCGAGGCTGGTGGAGTGGGAGAAAATGGCA ATGGCAATGCAGATCAGATGGAGAATGGTGCGGATGATGAAGATAAGGAAGACCCGCTTT CTGATGAGCAGTACGGTTATCCAAAAGCAGAGTCTGAAAAGTGGGTCTCTTGCATCAGAG TTCTTGATCCCAAGACAGCTACGACAACTTGTCTCCTGGAACTTCAGGACAACGAAGCTG CATACAGTGTCTGTACGGTGAATTTCCATGATAAAGAGTATGGTACACTGTTGGCTGTTG GTACGGTCAAAGGGATGCAGTTCTGGCCCAAGAAGAATCTAGTGGCTGGGTTCATACATA TTTATAGGTTTGTGGAGGATGGGAAATCTCTTGAGCTTCTTCATAAGACGCAAGTAGAAG GTGTTCCTCTTGCTCTGTGCCAGTTCCAAGGAAGACTGCTGGCAGGGATCGGACCTGTCC TCAGATTGTATGATTTGGGGAAAAAGAGACTGCTTAGGAAATGTGAAAACAAGCTCTTTC CAAACACCATTATCTCTATCCAAACTTACCGTGACCGTATATACGTTGGTGACATTCAGG AGTCTTTCCATTACTGCAAGTACAGGCGCGACGAGAATCAGCTGTACATATTTGCGGATG ACTGCGTGCCGAGGTGGCTGACAGCATCGCACCATGTGGATTTCGATACCATGGCAGGTG CAGATAAGTTTGGGAATGTGTATTTTGTGCGGTTGCCTCAGGATCTGTCGGAGGAGATAG AAGAAGACCCGACTGGCGGGAAGATCAAGTGGGAGCAAGGAAAGCTGAATGGAGCACCGA ACAAAGTGGATGAGATAGTACAGTTCCATGTTGGGGACGTTGTGACGTGCTTGCAGAAAG CTTCGATGATCCCAGGTGGATCGGAATCGATAATGTATGGAACAGTGATGGGTAGCATAG GGGCATTACATGCTTTCACATCCCGTGATGATGTGGATTTCTTCTCTCATCTGGAGATGC ACATGAGGCAGGAGTATCCTCCTCTCTGCGGGAGAGACCACATGGCTTACAGATCTGCAT ATTTTCCGGTCAAGGACGTGATAGATGGAGATCTGTGTGAGCAGTTCCCGACACTCCCAA TGGACTTGCAGAGGAAAATAGCAGACGAGCTGGATAGAACACCTGCGGAGATTCTGAAGA AGCTCGAAGACGCAAGGAACAAGATCATTTGATAACACACGAAAAGAGAGAGAGAGAGTC ATTGTTTTGTTGAAGGACAAAGTAGAGAGTAGAGAAGAAAGAGGTTATAATAGATTTTGT AAAGCTCTTCAATGGTTTGTTAAACAAAACCCCGCTCTTGTGAAAACTGATGAATTAATT GCAAGTTTACTTTTGAATCTACAACAGCATGAAACAGTTGCACCGGTAAGGTTTCTTCCA TATTCAGGATTCCTAGTAGCTATGGTAGTTCTTGATTCGTTCATGAGAAGCATTGAGAAT TGTGAAGCAGCAGACAAGTGGGAGCCTCGCCTGTCTCAACAAAAGATCAGGAACTGCAGA CGAAGAGATCTGAGTTAATTCAGAGGCTCTTAACACCAGCCATTCTCGTTGAGAGCAAAA ACAAAGATTGAGGATGCAGGTGAGCTAAATGTTTTGTTGAAGGACAAAGTAG